RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 RUFY4Q6ZNE9 571 aa23.07■■□□□ 1.28
CCS-208ENST00000533244 DEFB128Q7Z7B8 93 aa23.07■■□□□ 1.28
CCS-208ENST00000533244 LRCH3Q96II8 777 aa23.07■■□□□ 1.28
CCS-208ENST00000533244 SAMM50Q9Y512 469 aa23.07■■□□□ 1.28
CCS-208ENST00000533244 ZBTB42B2RXF5 422 aa23.06■■□□□ 1.28
CCS-208ENST00000533244 KIF28PB7ZC32 967 aa23.06■■□□□ 1.28
CCS-208ENST00000533244 ZNF862O60290 1169 aa23.06■■□□□ 1.28
CCS-208ENST00000533244 NBNO60934 754 aa23.06■■□□□ 1.28
CCS-208ENST00000533244 MIER3Q7Z3K6 550 aa23.06■■□□□ 1.28
CCS-208ENST00000533244 NOSTRINQ8IVI9 506 aa23.06■■□□□ 1.28
CCS-208ENST00000533244 BBXQ8WY36 941 aaPredicted RBP23.06■■□□□ 1.28
CCS-208ENST00000533244 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.06■■□□□ 1.28
CCS-208ENST00000533244 IGBP1P78318 339 aa23.05■■□□□ 1.28
CCS-208ENST00000533244 SPIRE1Q08AE8 756 aa23.05■■□□□ 1.28
CCS-208ENST00000533244 UGCGQ16739 394 aa23.05■■□□□ 1.28
CCS-208ENST00000533244 ZNF484Q5JVG2 852 aa23.05■■□□□ 1.28
CCS-208ENST00000533244 FAM26DQ5JW98 314 aa23.05■■□□□ 1.28
CCS-208ENST00000533244 SLFN12Q8IYM2 578 aa23.05■■□□□ 1.28
CCS-208ENST00000533244 TRAPPC12Q8WVT3 735 aa23.05■■□□□ 1.28
CCS-208ENST00000533244 RSPH10B2B2RC85 870 aa23.04■■□□□ 1.28
CCS-208ENST00000533244 EML1O00423 815 aa23.04■■□□□ 1.28
CCS-208ENST00000533244 RSPH10BP0C881 870 aa23.04■■□□□ 1.28
CCS-208ENST00000533244 GPR153Q6NV75 609 aa23.04■■□□□ 1.28
CCS-208ENST00000533244 OTOP2Q7RTS6 562 aa23.04■■□□□ 1.28
CCS-208ENST00000533244 ZBTB10Q96DT7 871 aa23.04■■□□□ 1.28
CCS-208ENST00000533244 FAM167AQ96KS9 214 aa23.04■■□□□ 1.28
CCS-208ENST00000533244 MTMR9Q96QG7 549 aa23.04■■□□□ 1.28
CCS-208ENST00000533244 CXXC1Q9P0U4 656 aaPredicted RBP23.04■■□□□ 1.28
CCS-208ENST00000533244 SMC3Q9UQE7 1217 aa23.04■■□□□ 1.28
CCS-208ENST00000533244 PCDHA2Q9Y5H9 948 aa23.04■■□□□ 1.28
CCS-208ENST00000533244 NEMFO60524 1076 aa23.03■■□□□ 1.28
CCS-208ENST00000533244 RPLP2P05387 115 aaKnown RBP23.03■■□□□ 1.28
CCS-208ENST00000533244 SMAD3P84022 425 aaKnown RBP23.03■■□□□ 1.28
CCS-208ENST00000533244 ORC2Q13416 577 aaPredicted RBP23.03■■□□□ 1.28
CCS-208ENST00000533244 MTHFD1LQ6UB35 978 aa23.03■■□□□ 1.28
CCS-208ENST00000533244 MTIF3Q9H2K0 278 aaKnown RBP23.03■■□□□ 1.28
CCS-208ENST00000533244 SIP14410 1827 aa23.03■■□□□ 1.28
CCS-208ENST00000533244 BAG4O95429 457 aaKnown RBP23.02■■□□□ 1.28
CCS-208ENST00000533244 OATP04181 439 aa23.02■■□□□ 1.28
CCS-208ENST00000533244 TRAPPC10P48553 1259 aa23.02■■□□□ 1.28
CCS-208ENST00000533244 PRKCEQ02156 737 aa23.02■■□□□ 1.28
CCS-208ENST00000533244 MGAT3Q09327 533 aa23.02■■□□□ 1.28
CCS-208ENST00000533244 CALCRLQ16602 461 aa23.02■■□□□ 1.28
CCS-208ENST00000533244 CKAP2LQ8IYA6 745 aa23.02■■□□□ 1.28
CCS-208ENST00000533244 SMIM35A0A1B0GVV1 85 aa23.01■■□□□ 1.27
CCS-208ENST00000533244 STBD1O95210 358 aa23.01■■□□□ 1.27
CCS-208ENST00000533244 CTSHP09668 335 aa23.01■■□□□ 1.27
CCS-208ENST00000533244 ACTN1P12814 892 aa23.01■■□□□ 1.27
CCS-208ENST00000533244 CNKSR3Q6P9H4 555 aa23.01■■□□□ 1.27
CCS-208ENST00000533244 DNAJB3Q8WWF6 145 aa23.01■■□□□ 1.27
CCS-208ENST00000533244 FTOQ9C0B1 505 aaKnown RBP eCLIP23.01■■□□□ 1.27
CCS-208ENST00000533244 TMEM60Q9H2L4 133 aa23.01■■□□□ 1.27
CCS-208ENST00000533244 HSFX4A0A1B0GTS1 333 aaPredicted RBP23■■□□□ 1.27
CCS-208ENST00000533244 HSFX3A0A1B0GWH4 333 aaPredicted RBP23■■□□□ 1.27
CCS-208ENST00000533244 BAIAP3O94812 1187 aa23■■□□□ 1.27
CCS-208ENST00000533244 C22orf31O95567 290 aa23■■□□□ 1.27
CCS-208ENST00000533244 CHRNA1P02708 482 aa23■■□□□ 1.27
CCS-208ENST00000533244 KLRC1P26715 233 aa23■■□□□ 1.27
CCS-208ENST00000533244 GNL2Q13823 731 aaKnown RBP23■■□□□ 1.27
CCS-208ENST00000533244 TCTN1Q2MV58 587 aa23■■□□□ 1.27
CCS-208ENST00000533244 FAM109BQ6ICB4 259 aaPredicted RBP23■■□□□ 1.27
CCS-208ENST00000533244 RSPH3Q86UC2 560 aa23■■□□□ 1.27
CCS-208ENST00000533244 SNX21Q969T3 373 aa23■■□□□ 1.27
CCS-208ENST00000533244 OSBPL7Q9BZF2 842 aa23■■□□□ 1.27
CCS-208ENST00000533244 CEP131Q9UPN4 1083 aa23■■□□□ 1.27
CCS-208ENST00000533244 K7ELQ4 463 aaPredicted RBP22.99■■□□□ 1.27
CCS-208ENST00000533244 MARCH6O60337 910 aa22.99■■□□□ 1.27
CCS-208ENST00000533244 EPHA7Q15375 998 aa22.99■■□□□ 1.27
CCS-208ENST00000533244 TTC38Q5R3I4 469 aa22.99■■□□□ 1.27
CCS-208ENST00000533244 NRBP2Q9NSY0 501 aa22.99■■□□□ 1.27
CCS-208ENST00000533244 PCDHA12Q9UN75 941 aa22.99■■□□□ 1.27
CCS-208ENST00000533244 ATP2B1P20020 1258 aa22.99■■□□□ 1.27
CCS-208ENST00000533244 MCM7P33993 719 aa22.99■■□□□ 1.27
CCS-208ENST00000533244 TOB1P50616 345 aaPredicted RBP22.99■■□□□ 1.27
CCS-208ENST00000533244 PSMC5P62195 406 aa22.99■■□□□ 1.27
CCS-208ENST00000533244 MKRN4PQ13434 485 aaPredicted RBP22.99■■□□□ 1.27
CCS-208ENST00000533244 TARBP2Q15633 366 aaKnown RBP22.99■■□□□ 1.27
CCS-208ENST00000533244 PLEKHG4Q58EX7 1191 aa22.99■■□□□ 1.27
CCS-208ENST00000533244 XKR3Q5GH77 459 aa22.99■■□□□ 1.27
CCS-208ENST00000533244 INTS4Q96HW7 963 aaKnown RBP22.99■■□□□ 1.27
CCS-208ENST00000533244 NIFKQ9BYG3 293 aaKnown RBP22.99■■□□□ 1.27
CCS-208ENST00000533244 TTC12Q9H892 705 aaPredicted RBP22.99■■□□□ 1.27
CCS-208ENST00000533244 NOL7Q9UMY1 257 aaKnown RBP22.99■■□□□ 1.27
CCS-208ENST00000533244 P4HBP07237 508 aaKnown RBP22.98■■□□□ 1.27
CCS-208ENST00000533244 QARSP47897 775 aaKnown RBP22.98■■□□□ 1.27
CCS-208ENST00000533244 MRPS6P82932 125 aaKnown RBP22.98■■□□□ 1.27
CCS-208ENST00000533244 NCAPH2Q6IBW4 605 aa22.98■■□□□ 1.27
CCS-208ENST00000533244 NME8Q8N427 588 aa22.98■■□□□ 1.27
CCS-208ENST00000533244 LINC01465Q8N7H1 131 aa22.98■■□□□ 1.27
CCS-208ENST00000533244 BANK1Q8NDB2 785 aa22.98■■□□□ 1.27
CCS-208ENST00000533244 CEP89Q96ST8 783 aa22.98■■□□□ 1.27
CCS-208ENST00000533244 FAM49AQ9H0Q0 323 aaPredicted RBP22.98■■□□□ 1.27
CCS-208ENST00000533244 SLC4A7Q9Y6M7 1214 aa22.98■■□□□ 1.27
CCS-208ENST00000533244 H3BQV1 296 aa22.97■■□□□ 1.27
CCS-208ENST00000533244 RBAK-RBAKDNI3L0D1 243 aa22.97■■□□□ 1.27
CCS-208ENST00000533244 ZNF174Q15697 407 aa22.97■■□□□ 1.27
CCS-208ENST00000533244 LARP1BQ659C4 914 aaKnown RBP22.97■■□□□ 1.27
CCS-208ENST00000533244 TRMT1LQ7Z2T5 733 aaKnown RBP22.97■■□□□ 1.27
CCS-208ENST00000533244 KIAA0319LQ8IZA0 1049 aa22.97■■□□□ 1.27
CCS-208ENST00000533244 DBF4BQ8NFT6 615 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms