RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 RRN3P2A6NIE6 340 aa12.59□□□□□ -0.39
TRAPPC4-211ENST00000533012 TLR3O15455 904 aaKnown RBP12.59□□□□□ -0.39
TRAPPC4-211ENST00000533012 ZNF862O60290 1169 aa12.59□□□□□ -0.39
TRAPPC4-211ENST00000533012 PQBP1O60828 265 aaKnown RBP12.59□□□□□ -0.39
TRAPPC4-211ENST00000533012 OATP04181 439 aa12.59□□□□□ -0.39
TRAPPC4-211ENST00000533012 INSRRP14616 1297 aa12.59□□□□□ -0.39
TRAPPC4-211ENST00000533012 MUTP22033 750 aa12.59□□□□□ -0.39
TRAPPC4-211ENST00000533012 RPA1P27694 616 aa12.59□□□□□ -0.39
TRAPPC4-211ENST00000533012 CCT6AP40227 531 aaKnown RBP12.59□□□□□ -0.39
TRAPPC4-211ENST00000533012 UBA7P41226 1012 aa12.59□□□□□ -0.39
TRAPPC4-211ENST00000533012 RGS19P49795 217 aa12.59□□□□□ -0.39
TRAPPC4-211ENST00000533012 RTP1P59025 263 aa12.59□□□□□ -0.39
TRAPPC4-211ENST00000533012 PRKCEQ02156 737 aa12.59□□□□□ -0.39
TRAPPC4-211ENST00000533012 CYP4A11Q02928 519 aa12.59□□□□□ -0.39
TRAPPC4-211ENST00000533012 TLE2Q04725 743 aa12.59□□□□□ -0.39
TRAPPC4-211ENST00000533012 PPFIA1Q13136 1202 aa12.59□□□□□ -0.39
TRAPPC4-211ENST00000533012 UGCGQ16739 394 aa12.59□□□□□ -0.39
TRAPPC4-211ENST00000533012 TRIM60Q495X7 471 aa12.59□□□□□ -0.39
TRAPPC4-211ENST00000533012 XKR3Q5GH77 459 aa12.59□□□□□ -0.39
TRAPPC4-211ENST00000533012 ZNF484Q5JVG2 852 aa12.59□□□□□ -0.39
TRAPPC4-211ENST00000533012 CATSPER3Q86XQ3 398 aa12.59□□□□□ -0.39
TRAPPC4-211ENST00000533012 PPP1R13LQ8WUF5 828 aa12.59□□□□□ -0.39
TRAPPC4-211ENST00000533012 DPF3Q92784 378 aa12.59□□□□□ -0.39
TRAPPC4-211ENST00000533012 LXNQ9BS40 222 aa12.59□□□□□ -0.39
TRAPPC4-211ENST00000533012 SCAND2PQ9GZW5 306 aaPredicted RBP12.59□□□□□ -0.39
TRAPPC4-211ENST00000533012 SETD4Q9NVD3 440 aa12.59□□□□□ -0.39
TRAPPC4-211ENST00000533012 FBXO2Q9UK22 296 aaPredicted RBP12.59□□□□□ -0.39
TRAPPC4-211ENST00000533012 NOD1Q9Y239 953 aa12.59□□□□□ -0.39
TRAPPC4-211ENST00000533012 IGSF9BQ9UPX0 1349 aa12.59□□□□□ -0.39
TRAPPC4-211ENST00000533012 PP2D1A8MPX8 630 aa12.58□□□□□ -0.4
TRAPPC4-211ENST00000533012 EVI5O60447 810 aa12.58□□□□□ -0.4
TRAPPC4-211ENST00000533012 MED24O75448 989 aa12.58□□□□□ -0.4
TRAPPC4-211ENST00000533012 LYPLA2O95372 231 aa12.58□□□□□ -0.4
TRAPPC4-211ENST00000533012 SPATA31C1P0DKV0 1188 aa12.58□□□□□ -0.4
TRAPPC4-211ENST00000533012 XRCC6P12956 609 aaKnown RBP eCLIP12.58□□□□□ -0.4
TRAPPC4-211ENST00000533012 CDC25AP30304 524 aa12.58□□□□□ -0.4
TRAPPC4-211ENST00000533012 ME1P48163 572 aa12.58□□□□□ -0.4
TRAPPC4-211ENST00000533012 IGBP1P78318 339 aa12.58□□□□□ -0.4
TRAPPC4-211ENST00000533012 GRIK4Q16099 956 aa12.58□□□□□ -0.4
TRAPPC4-211ENST00000533012 PTGISQ16647 500 aa12.58□□□□□ -0.4
TRAPPC4-211ENST00000533012 GDF6Q6KF10 455 aaPredicted RBP12.58□□□□□ -0.4
TRAPPC4-211ENST00000533012 FAM126BQ8IXS8 530 aa12.58□□□□□ -0.4
TRAPPC4-211ENST00000533012 SNX29Q8TEQ0 813 aa12.58□□□□□ -0.4
TRAPPC4-211ENST00000533012 SPATA32Q96LK8 384 aa12.58□□□□□ -0.4
TRAPPC4-211ENST00000533012 NACC1Q96RE7 527 aa12.58□□□□□ -0.4
TRAPPC4-211ENST00000533012 NIFKQ9BYG3 293 aaKnown RBP12.58□□□□□ -0.4
TRAPPC4-211ENST00000533012 CSRNP2Q9H175 543 aa12.58□□□□□ -0.4
TRAPPC4-211ENST00000533012 TRPV6Q9H1D0 765 aa12.58□□□□□ -0.4
TRAPPC4-211ENST00000533012 SEPT9Q9UHD8 586 aaPredicted RBP12.58□□□□□ -0.4
TRAPPC4-211ENST00000533012 KIAA0100Q14667 2235 aaKnown RBP12.58□□□□□ -0.4
TRAPPC4-211ENST00000533012 SLC26A4O43511 780 aa12.57□□□□□ -0.4
TRAPPC4-211ENST00000533012 B4GALT4O60513 344 aa12.57□□□□□ -0.4
TRAPPC4-211ENST00000533012 CUTAO60888 179 aa12.57□□□□□ -0.4
TRAPPC4-211ENST00000533012 STBD1O95210 358 aa12.57□□□□□ -0.4
TRAPPC4-211ENST00000533012 YWHABP31946 246 aaKnown RBP12.57□□□□□ -0.4
TRAPPC4-211ENST00000533012 GRIN1Q05586 938 aa12.57□□□□□ -0.4
TRAPPC4-211ENST00000533012 ZRSR1Q15695 479 aaKnown RBP12.57□□□□□ -0.4
TRAPPC4-211ENST00000533012 CABP7Q86V35 215 aa12.57□□□□□ -0.4
TRAPPC4-211ENST00000533012 KCTD17Q8N5Z5 321 aa12.57□□□□□ -0.4
TRAPPC4-211ENST00000533012 ZNF579Q8NAF0 562 aaKnown RBP12.57□□□□□ -0.4
TRAPPC4-211ENST00000533012 LEO1Q8WVC0 666 aaPredicted RBP12.57□□□□□ -0.4
TRAPPC4-211ENST00000533012 CALML4Q96GE6 196 aa12.57□□□□□ -0.4
TRAPPC4-211ENST00000533012 CDK5RAP3Q96JB5 506 aa12.57□□□□□ -0.4
TRAPPC4-211ENST00000533012 CLIC6Q96NY7 704 aa12.57□□□□□ -0.4
TRAPPC4-211ENST00000533012 TRMT13Q9NUP7 481 aaKnown RBP12.57□□□□□ -0.4
TRAPPC4-211ENST00000533012 TMEM39AQ9NV64 488 aa12.57□□□□□ -0.4
TRAPPC4-211ENST00000533012 WRAP73Q9P2S5 460 aaPredicted RBP12.57□□□□□ -0.4
TRAPPC4-211ENST00000533012 KIAA1024Q9UPX6 916 aa12.57□□□□□ -0.4
TRAPPC4-211ENST00000533012 COL1A2P08123 1366 aa12.56□□□□□ -0.4
TRAPPC4-211ENST00000533012 FRMPD3Q5JV73 1810 aa12.56□□□□□ -0.4
TRAPPC4-211ENST00000533012 MAGEB2O15479 319 aa12.56□□□□□ -0.4
TRAPPC4-211ENST00000533012 TREHO43280 583 aa12.56□□□□□ -0.4
TRAPPC4-211ENST00000533012 CD4P01730 458 aa12.56□□□□□ -0.4
TRAPPC4-211ENST00000533012 CLTBP09497 229 aa12.56□□□□□ -0.4
TRAPPC4-211ENST00000533012 KLRC1P26715 233 aa12.56□□□□□ -0.4
TRAPPC4-211ENST00000533012 HOXC8P31273 242 aa12.56□□□□□ -0.4
TRAPPC4-211ENST00000533012 TXLNAP40222 546 aa12.56□□□□□ -0.4
TRAPPC4-211ENST00000533012 ZNF200P98182 395 aaPredicted RBP12.56□□□□□ -0.4
TRAPPC4-211ENST00000533012 FAAP100Q0VG06 881 aa12.56□□□□□ -0.4
TRAPPC4-211ENST00000533012 MTERF2Q49AM1 385 aa12.56□□□□□ -0.4
TRAPPC4-211ENST00000533012 XKR9Q5GH70 373 aa12.56□□□□□ -0.4
TRAPPC4-211ENST00000533012 SPECC1Q5M775 1068 aa12.56□□□□□ -0.4
TRAPPC4-211ENST00000533012 ANO5Q75V66 913 aa12.56□□□□□ -0.4
TRAPPC4-211ENST00000533012 EXOC8Q8IYI6 725 aa12.56□□□□□ -0.4
TRAPPC4-211ENST00000533012 RASSF8Q8NHQ8 419 aa12.56□□□□□ -0.4
TRAPPC4-211ENST00000533012 PIGOQ8TEQ8 1089 aa12.56□□□□□ -0.4
TRAPPC4-211ENST00000533012 LMBR1Q8WVP7 490 aa12.56□□□□□ -0.4
TRAPPC4-211ENST00000533012 EPSTI1Q96J88 318 aa12.56□□□□□ -0.4
TRAPPC4-211ENST00000533012 CHAMP1Q96JM3 812 aa12.56□□□□□ -0.4
TRAPPC4-211ENST00000533012 CEP170P1Q96L14 293 aa12.56□□□□□ -0.4
TRAPPC4-211ENST00000533012 MMTAG2Q9BU76 263 aaKnown RBP12.56□□□□□ -0.4
TRAPPC4-211ENST00000533012 CCSER1Q9C0I3 900 aa12.56□□□□□ -0.4
TRAPPC4-211ENST00000533012 NT5C3AQ9H0P0 336 aa12.56□□□□□ -0.4
TRAPPC4-211ENST00000533012 CYP26B1Q9NR63 512 aa12.56□□□□□ -0.4
TRAPPC4-211ENST00000533012 ANKEF1Q9NU02 776 aa12.56□□□□□ -0.4
TRAPPC4-211ENST00000533012 CCDC39Q9UFE4 941 aa12.56□□□□□ -0.4
TRAPPC4-211ENST00000533012 PRKAG2Q9UGJ0 569 aa12.56□□□□□ -0.4
TRAPPC4-211ENST00000533012 PCDHA7Q9UN72 937 aa12.56□□□□□ -0.4
TRAPPC4-211ENST00000533012 DNM3Q9UQ16 869 aa12.56□□□□□ -0.4
TRAPPC4-211ENST00000533012 PPME1Q9Y570 386 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms