RNA–Protein interactions for RNA: ENST00000533011.5

CHMP4A-206, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-206ENST00000533011 ZMYND12Q9H0C1 365 aa11.62□□□□□ -0.55
CHMP4A-206ENST00000533011 MLXIPQ9HAP2 919 aa11.62□□□□□ -0.55
CHMP4A-206ENST00000533011 C6orf50Q9HD87 102 aa11.62□□□□□ -0.55
CHMP4A-206ENST00000533011 MYH7BA7E2Y1 1941 aa11.62□□□□□ -0.55
CHMP4A-206ENST00000533011 DCHS1Q96JQ0 3298 aa11.61□□□□□ -0.55
CHMP4A-206ENST00000533011 PTPRSQ13332 1948 aa11.61□□□□□ -0.55
CHMP4A-206ENST00000533011 MAFGO15525 162 aa11.61□□□□□ -0.55
CHMP4A-206ENST00000533011 PPFIA3O75145 1194 aa11.61□□□□□ -0.55
CHMP4A-206ENST00000533011 GNA11P29992 359 aa11.61□□□□□ -0.55
CHMP4A-206ENST00000533011 CLK2P49760 499 aaKnown RBP11.61□□□□□ -0.55
CHMP4A-206ENST00000533011 AK2P54819 239 aa11.61□□□□□ -0.55
CHMP4A-206ENST00000533011 VCPP55072 806 aaKnown RBP11.61□□□□□ -0.55
CHMP4A-206ENST00000533011 COASYQ13057 564 aa11.61□□□□□ -0.55
CHMP4A-206ENST00000533011 ADAM15Q13444 863 aa11.61□□□□□ -0.55
CHMP4A-206ENST00000533011 HSDL1Q3SXM5 330 aa11.61□□□□□ -0.55
CHMP4A-206ENST00000533011 MYOCDQ8IZQ8 938 aa11.61□□□□□ -0.55
CHMP4A-206ENST00000533011 GIMAP8Q8ND71 665 aaPredicted RBP11.61□□□□□ -0.55
CHMP4A-206ENST00000533011 RIPOR3Q96MK2 946 aa11.61□□□□□ -0.55
CHMP4A-206ENST00000533011 SPATA33Q96N06 139 aa11.61□□□□□ -0.55
CHMP4A-206ENST00000533011 SENP7Q9BQF6 1050 aa11.61□□□□□ -0.55
CHMP4A-206ENST00000533011 ANO3Q9BYT9 981 aa11.61□□□□□ -0.55
CHMP4A-206ENST00000533011 SLKQ9H2G2 1235 aaPredicted RBP11.61□□□□□ -0.55
CHMP4A-206ENST00000533011 SH3GLB2Q9NR46 395 aa11.61□□□□□ -0.55
CHMP4A-206ENST00000533011 TPCN1Q9ULQ1 816 aa11.61□□□□□ -0.55
CHMP4A-206ENST00000533011 UBIAD1Q9Y5Z9 338 aa11.61□□□□□ -0.55
CHMP4A-206ENST00000533011 TRIP12Q14669 1992 aaPredicted RBP11.6□□□□□ -0.55
CHMP4A-206ENST00000533011 SORBS3O60504 671 aa11.6□□□□□ -0.55
CHMP4A-206ENST00000533011 PFKFB2O60825 505 aa11.6□□□□□ -0.55
CHMP4A-206ENST00000533011 CDKL5O76039 1030 aa11.6□□□□□ -0.55
CHMP4A-206ENST00000533011 DEXIO95424 95 aa11.6□□□□□ -0.55
CHMP4A-206ENST00000533011 HOXD8P13378 290 aaPredicted RBP11.6□□□□□ -0.55
CHMP4A-206ENST00000533011 NEK4P51957 841 aa11.6□□□□□ -0.55
CHMP4A-206ENST00000533011 DLX2Q07687 328 aaPredicted RBP11.6□□□□□ -0.55
CHMP4A-206ENST00000533011 HYAL1Q12794 435 aa11.6□□□□□ -0.55
CHMP4A-206ENST00000533011 SEMA3FQ13275 785 aa11.6□□□□□ -0.55
CHMP4A-206ENST00000533011 MTMR1Q13613 665 aa11.6□□□□□ -0.55
CHMP4A-206ENST00000533011 GDF6Q6KF10 455 aaPredicted RBP11.6□□□□□ -0.55
CHMP4A-206ENST00000533011 METTL7BQ6UX53 244 aa11.6□□□□□ -0.55
CHMP4A-206ENST00000533011 CYFIP1Q7L576 1253 aa11.6□□□□□ -0.55
CHMP4A-206ENST00000533011 DGLUCYQ7Z3D6 616 aa11.6□□□□□ -0.55
CHMP4A-206ENST00000533011 ADSSL1Q8N142 457 aa11.6□□□□□ -0.55
CHMP4A-206ENST00000533011 CCDC148Q8NFR7 591 aa11.6□□□□□ -0.55
CHMP4A-206ENST00000533011 BICD2Q8TD16 824 aa11.6□□□□□ -0.55
CHMP4A-206ENST00000533011 MSLNLQ96KJ4 702 aa11.6□□□□□ -0.55
CHMP4A-206ENST00000533011 CTAGE1Q96RT6 745 aa11.6□□□□□ -0.55
CHMP4A-206ENST00000533011 KATNAL1Q9BW62 490 aa11.6□□□□□ -0.55
CHMP4A-206ENST00000533011 PHF7Q9BWX1 381 aaPredicted RBP11.6□□□□□ -0.55
CHMP4A-206ENST00000533011 TMEM260Q9NX78 707 aa11.6□□□□□ -0.55
CHMP4A-206ENST00000533011 GVINP1Q7Z2Y8 2422 aa11.6□□□□□ -0.55
CHMP4A-206ENST00000533011 KMT2EQ8IZD2 1858 aa11.59□□□□□ -0.55
CHMP4A-206ENST00000533011 FSD2A1L4K1 749 aa11.59□□□□□ -0.55
CHMP4A-206ENST00000533011 NOP56O00567 594 aaKnown RBP11.59□□□□□ -0.55
CHMP4A-206ENST00000533011 ATF7P17544 494 aaPredicted RBP11.59□□□□□ -0.55
CHMP4A-206ENST00000533011 ITGB5P18084 799 aa11.59□□□□□ -0.55
CHMP4A-206ENST00000533011 BMPR1AP36894 532 aa11.59□□□□□ -0.55
CHMP4A-206ENST00000533011 SREBF1P36956 1147 aa11.59□□□□□ -0.55
CHMP4A-206ENST00000533011 CHMP4BP1P59074 171 aa11.59□□□□□ -0.55
CHMP4A-206ENST00000533011 SCRN1Q12765 414 aa11.59□□□□□ -0.55
CHMP4A-206ENST00000533011 MKRN4PQ13434 485 aaPredicted RBP11.59□□□□□ -0.55
CHMP4A-206ENST00000533011 CLUL1Q15846 466 aa11.59□□□□□ -0.55
CHMP4A-206ENST00000533011 JAKMIP3Q5VZ66 844 aa11.59□□□□□ -0.55
CHMP4A-206ENST00000533011 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.59□□□□□ -0.55
CHMP4A-206ENST00000533011 REXO1Q8N1G1 1221 aaKnown RBP11.59□□□□□ -0.55
CHMP4A-206ENST00000533011 FIBCD1Q8N539 461 aa11.59□□□□□ -0.55
CHMP4A-206ENST00000533011 C7orf31Q8N865 590 aa11.59□□□□□ -0.55
CHMP4A-206ENST00000533011 KAT2BQ92831 832 aa11.59□□□□□ -0.55
CHMP4A-206ENST00000533011 PGBD1Q96JS3 809 aa11.59□□□□□ -0.55
CHMP4A-206ENST00000533011 MXRA8Q9BRK3 442 aa11.59□□□□□ -0.55
CHMP4A-206ENST00000533011 SEMA4AQ9H3S1 761 aa11.59□□□□□ -0.55
CHMP4A-206ENST00000533011 BCAS3Q9H6U6 928 aa11.59□□□□□ -0.55
CHMP4A-206ENST00000533011 JADE2Q9NQC1 790 aa11.59□□□□□ -0.55
CHMP4A-206ENST00000533011 VPS54Q9P1Q0 977 aa11.59□□□□□ -0.55
CHMP4A-206ENST00000533011 GTF2IRD1Q9UHL9 959 aa11.59□□□□□ -0.55
CHMP4A-206ENST00000533011 COL4A6Q14031 1691 aa11.59□□□□□ -0.55
CHMP4A-206ENST00000533011 PLXNA3P51805 1871 aa11.58□□□□□ -0.56
CHMP4A-206ENST00000533011 HAS3O00219 553 aa11.58□□□□□ -0.56
CHMP4A-206ENST00000533011 ATP9AO75110 1047 aa11.58□□□□□ -0.56
CHMP4A-206ENST00000533011 F2P00734 622 aa11.58□□□□□ -0.56
CHMP4A-206ENST00000533011 KCNA2P16389 499 aa11.58□□□□□ -0.56
CHMP4A-206ENST00000533011 ZNF76P36508 570 aa11.58□□□□□ -0.56
CHMP4A-206ENST00000533011 PSEN2P49810 448 aa11.58□□□□□ -0.56
CHMP4A-206ENST00000533011 NDUFV1P49821 464 aa11.58□□□□□ -0.56
CHMP4A-206ENST00000533011 NLRP5P59047 1200 aa11.58□□□□□ -0.56
CHMP4A-206ENST00000533011 PUM1Q14671 1186 aaKnown RBP eCLIP11.58□□□□□ -0.569e-8■□□□□ 9.5
CHMP4A-206ENST00000533011 PTPN21Q16825 1174 aa11.58□□□□□ -0.56
CHMP4A-206ENST00000533011 CEP55Q53EZ4 464 aa11.58□□□□□ -0.56
CHMP4A-206ENST00000533011 NAALADL2Q58DX5 795 aa11.58□□□□□ -0.56
CHMP4A-206ENST00000533011 FAM177A1Q8N128 213 aaPredicted RBP11.58□□□□□ -0.56
CHMP4A-206ENST00000533011 SMRP1Q8NCR6 262 aa11.58□□□□□ -0.56
CHMP4A-206ENST00000533011 DBF4BQ8NFT6 615 aa11.58□□□□□ -0.56
CHMP4A-206ENST00000533011 SEPT8Q92599 483 aa11.58□□□□□ -0.56
CHMP4A-206ENST00000533011 DHX38Q92620 1227 aaKnown RBP11.58□□□□□ -0.56
CHMP4A-206ENST00000533011 PLVAPQ9BX97 442 aa11.58□□□□□ -0.56
CHMP4A-206ENST00000533011 KCNH7Q9NS40 1196 aa11.58□□□□□ -0.56
CHMP4A-206ENST00000533011 CACNA1GO43497 2377 aa11.58□□□□□ -0.56
CHMP4A-206ENST00000533011 DMDP11532 3685 aa11.57□□□□□ -0.56
CHMP4A-206ENST00000533011 DOCK5Q9H7D0 1870 aa11.57□□□□□ -0.56
CHMP4A-206ENST00000533011 RSPH10B2B2RC85 870 aa11.57□□□□□ -0.56
CHMP4A-206ENST00000533011 H3BRB1 525 aa11.57□□□□□ -0.56
CHMP4A-206ENST00000533011 TBX10O75333 385 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms