RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 INO80BQ9C086 356 aaPredicted RBP16.6■□□□□ 0.25
PCDHA3-202ENST00000532566 ZMYND12Q9H0C1 365 aa16.6■□□□□ 0.25
PCDHA3-202ENST00000532566 POLD4Q9HCU8 107 aa16.6■□□□□ 0.25
PCDHA3-202ENST00000532566 ABCB11O95342 1321 aa16.6■□□□□ 0.25
PCDHA3-202ENST00000532566 PALMO75781 387 aa16.6■□□□□ 0.25
PCDHA3-202ENST00000532566 PPP4CP60510 307 aa16.6■□□□□ 0.25
PCDHA3-202ENST00000532566 BFSP1Q12934 665 aa16.6■□□□□ 0.25
PCDHA3-202ENST00000532566 EAPPQ56P03 285 aaPredicted RBP16.6■□□□□ 0.25
PCDHA3-202ENST00000532566 CLEC10AQ8IUN9 316 aa16.6■□□□□ 0.25
PCDHA3-202ENST00000532566 RHOT2Q8IXI1 618 aa16.6■□□□□ 0.25
PCDHA3-202ENST00000532566 WHAMMQ8TF30 809 aa16.6■□□□□ 0.25
PCDHA3-202ENST00000532566 C7orf25Q9BPX7 421 aa16.6■□□□□ 0.25
PCDHA3-202ENST00000532566 HESX1Q9UBX0 185 aa16.6■□□□□ 0.25
PCDHA3-202ENST00000532566 ITIH6Q6UXX5 1313 aa16.59■□□□□ 0.25
PCDHA3-202ENST00000532566 GPR75-ASB3A0A0A6YYF3 556 aa16.59■□□□□ 0.25
PCDHA3-202ENST00000532566 GOLGA8IPA6NC78 632 aa16.59■□□□□ 0.25
PCDHA3-202ENST00000532566 GOLGA8JA6NMD2 632 aa16.59■□□□□ 0.25
PCDHA3-202ENST00000532566 UBE2Q2LH0YL09 131 aa16.59■□□□□ 0.25
PCDHA3-202ENST00000532566 PDHBP11177 359 aa16.59■□□□□ 0.25
PCDHA3-202ENST00000532566 JAK3P52333 1124 aa16.59■□□□□ 0.25
PCDHA3-202ENST00000532566 PLTPP55058 493 aa16.59■□□□□ 0.25
PCDHA3-202ENST00000532566 CFAP157Q5JU67 520 aa16.59■□□□□ 0.25
PCDHA3-202ENST00000532566 GKAP1Q5VSY0 366 aaPredicted RBP16.59■□□□□ 0.25
PCDHA3-202ENST00000532566 TC2NQ8N9U0 490 aa16.59■□□□□ 0.25
PCDHA3-202ENST00000532566 TBC1D22BQ9NU19 505 aa16.59■□□□□ 0.25
PCDHA3-202ENST00000532566 PTPN22Q9Y2R2 807 aa16.59■□□□□ 0.25
PCDHA3-202ENST00000532566 CCDC188H7C350 402 aa16.59■□□□□ 0.25
PCDHA3-202ENST00000532566 GFPT1Q06210 699 aaPredicted RBP16.59■□□□□ 0.25
PCDHA3-202ENST00000532566 SPATS2Q86XZ4 545 aaKnown RBP16.59■□□□□ 0.25
PCDHA3-202ENST00000532566 XXYLT1Q8NBI6 393 aa16.59■□□□□ 0.25
PCDHA3-202ENST00000532566 KLRK1P26718 216 aa16.59■□□□□ 0.25
PCDHA3-202ENST00000532566 FXR1P51114 621 aaKnown RBP eCLIP16.59■□□□□ 0.25
PCDHA3-202ENST00000532566 RASA3Q14644 834 aa16.59■□□□□ 0.25
PCDHA3-202ENST00000532566 PPP1R2P3Q6NXS1 205 aa16.59■□□□□ 0.25
PCDHA3-202ENST00000532566 TMEM60Q9H2L4 133 aa16.59■□□□□ 0.25
PCDHA3-202ENST00000532566 SLC5A4Q9NY91 659 aa16.59■□□□□ 0.25
PCDHA3-202ENST00000532566 IGBP1P78318 339 aa16.58■□□□□ 0.25
PCDHA3-202ENST00000532566 SLC10A5Q5PT55 438 aa16.58■□□□□ 0.25
PCDHA3-202ENST00000532566 HPSEQ9Y251 543 aa16.58■□□□□ 0.25
PCDHA3-202ENST00000532566 ATP8A1Q9Y2Q0 1164 aa16.58■□□□□ 0.25
PCDHA3-202ENST00000532566 WDR64B1ANS9 1081 aa16.58■□□□□ 0.25
PCDHA3-202ENST00000532566 LMNB2Q03252 620 aa16.58■□□□□ 0.25
PCDHA3-202ENST00000532566 STK4Q13043 487 aa16.58■□□□□ 0.25
PCDHA3-202ENST00000532566 GLE1Q53GS7 698 aaKnown RBP16.58■□□□□ 0.25
PCDHA3-202ENST00000532566 SGO2Q562F6 1265 aa16.58■□□□□ 0.25
PCDHA3-202ENST00000532566 STRIP1Q5VSL9 837 aa16.58■□□□□ 0.25
PCDHA3-202ENST00000532566 ALS2CLQ60I27 953 aa16.58■□□□□ 0.25
PCDHA3-202ENST00000532566 KAZNQ674X7 775 aa16.58■□□□□ 0.25
PCDHA3-202ENST00000532566 SCYL2Q6P3W7 929 aa16.58■□□□□ 0.25
PCDHA3-202ENST00000532566 PALM2Q8IXS6 379 aa16.58■□□□□ 0.25
PCDHA3-202ENST00000532566 BANK1Q8NDB2 785 aa16.58■□□□□ 0.25
PCDHA3-202ENST00000532566 HPS3Q969F9 1004 aa16.58■□□□□ 0.25
PCDHA3-202ENST00000532566 IRX2Q9BZI1 471 aaPredicted RBP16.58■□□□□ 0.25
PCDHA3-202ENST00000532566 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.58■□□□□ 0.25
PCDHA3-202ENST00000532566 SMARCA1P28370 1054 aa16.58■□□□□ 0.24
PCDHA3-202ENST00000532566 DHX9Q08211 1270 aaKnown RBP16.58■□□□□ 0.24
PCDHA3-202ENST00000532566 CTAGE3PQ8IX95 158 aa16.58■□□□□ 0.24
PCDHA3-202ENST00000532566 MRPL47Q9HD33 250 aaKnown RBP16.58■□□□□ 0.24
PCDHA3-202ENST00000532566 ZNF233A6NK53 670 aa16.58■□□□□ 0.24
PCDHA3-202ENST00000532566 M0QZ92 97 aa16.58■□□□□ 0.24
PCDHA3-202ENST00000532566 IPO5O00410 1097 aaKnown RBP16.58■□□□□ 0.24
PCDHA3-202ENST00000532566 TADA3O75528 432 aa16.58■□□□□ 0.24
PCDHA3-202ENST00000532566 PHBP35232 272 aa16.58■□□□□ 0.24
PCDHA3-202ENST00000532566 KRT81Q14533 505 aa16.58■□□□□ 0.24
PCDHA3-202ENST00000532566 NTRK3Q16288 839 aa16.58■□□□□ 0.24
PCDHA3-202ENST00000532566 HHIPL2Q6UWX4 724 aa16.58■□□□□ 0.24
PCDHA3-202ENST00000532566 PNMA8AQ86V59 439 aaPredicted RBP16.58■□□□□ 0.24
PCDHA3-202ENST00000532566 K7ERI5 159 aa16.57■□□□□ 0.24
PCDHA3-202ENST00000532566 CCT5P48643 541 aa16.57■□□□□ 0.24
PCDHA3-202ENST00000532566 CASC4Q6P4E1 433 aa16.57■□□□□ 0.24
PCDHA3-202ENST00000532566 PRPF38AQ8NAV1 312 aaKnown RBP16.57■□□□□ 0.24
PCDHA3-202ENST00000532566 CHP1Q99653 195 aa16.57■□□□□ 0.24
PCDHA3-202ENST00000532566 NYAP2Q9P242 653 aa16.57■□□□□ 0.24
PCDHA3-202ENST00000532566 SRGNP10124 158 aa16.57■□□□□ 0.24
PCDHA3-202ENST00000532566 HACE1Q8IYU2 909 aa16.57■□□□□ 0.24
PCDHA3-202ENST00000532566 GIMAP8Q8ND71 665 aaPredicted RBP16.57■□□□□ 0.24
PCDHA3-202ENST00000532566 MCPH1Q8NEM0 835 aa16.57■□□□□ 0.24
PCDHA3-202ENST00000532566 EIF2AK1Q9BQI3 630 aaKnown RBP16.57■□□□□ 0.24
PCDHA3-202ENST00000532566 AP1M1Q9BXS5 423 aa16.57■□□□□ 0.24
PCDHA3-202ENST00000532566 ECEL1O95672 775 aa16.57■□□□□ 0.24
PCDHA3-202ENST00000532566 P4HBP07237 508 aaKnown RBP16.57■□□□□ 0.24
PCDHA3-202ENST00000532566 KRT76Q01546 638 aa16.57■□□□□ 0.24
PCDHA3-202ENST00000532566 LLGL1Q15334 1064 aa16.57■□□□□ 0.24
PCDHA3-202ENST00000532566 RAVER2Q9HCJ3 691 aaKnown RBP16.57■□□□□ 0.24
PCDHA3-202ENST00000532566 PIM2Q9P1W9 311 aa16.57■□□□□ 0.24
PCDHA3-202ENST00000532566 CCDC13Q8IYE1 715 aa16.57■□□□□ 0.24
PCDHA3-202ENST00000532566 SSX2IPQ9Y2D8 614 aa16.57■□□□□ 0.24
PCDHA3-202ENST00000532566 ESYT2A0FGR8 921 aa16.56■□□□□ 0.24
PCDHA3-202ENST00000532566 PABPN1LA6NDY0 278 aaKnown RBP16.56■□□□□ 0.24
PCDHA3-202ENST00000532566 ARL1P40616 181 aaPredicted RBP16.56■□□□□ 0.24
PCDHA3-202ENST00000532566 SEC23AQ15436 765 aa16.56■□□□□ 0.24
PCDHA3-202ENST00000532566 TTC19Q6DKK2 380 aaPredicted RBP16.56■□□□□ 0.24
PCDHA3-202ENST00000532566 CDC42EP5Q6NZY7 148 aa16.56■□□□□ 0.24
PCDHA3-202ENST00000532566 EXOC8Q8IYI6 725 aa16.56■□□□□ 0.24
PCDHA3-202ENST00000532566 ANKRD36BP1Q96IX9 119 aa16.56■□□□□ 0.24
PCDHA3-202ENST00000532566 PSMD1Q99460 953 aa16.56■□□□□ 0.24
PCDHA3-202ENST00000532566 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.56■□□□□ 0.24
PCDHA3-202ENST00000532566 NDUFB10O96000 172 aa16.56■□□□□ 0.24
PCDHA3-202ENST00000532566 QARSP47897 775 aaKnown RBP16.56■□□□□ 0.24
PCDHA3-202ENST00000532566 TFAMQ00059 246 aaKnown RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms