RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 AFPP02771 609 aaKnown RBP12.25□□□□□ -0.45
PTPRK-221ENST00000532331 PSMD2Q13200 908 aa12.25□□□□□ -0.45
PTPRK-221ENST00000532331 PKP1Q13835 747 aa12.25□□□□□ -0.45
PTPRK-221ENST00000532331 SBK1Q52WX2 424 aa12.25□□□□□ -0.45
PTPRK-221ENST00000532331 ANKRD13CQ8N6S4 541 aa12.25□□□□□ -0.45
PTPRK-221ENST00000532331 VPS37BQ9H9H4 285 aa12.25□□□□□ -0.45
PTPRK-221ENST00000532331 NDUFAB1O14561 156 aa12.25□□□□□ -0.45
PTPRK-221ENST00000532331 H2AFZP0C0S5 128 aa12.25□□□□□ -0.45
PTPRK-221ENST00000532331 CDC25AP30304 524 aa12.25□□□□□ -0.45
PTPRK-221ENST00000532331 DENND2CQ68D51 928 aa12.25□□□□□ -0.45
PTPRK-221ENST00000532331 H2AFVQ71UI9 128 aa12.25□□□□□ -0.45
PTPRK-221ENST00000532331 DYDC2Q96IM9 177 aa12.25□□□□□ -0.45
PTPRK-221ENST00000532331 HEXIM2Q96MH2 286 aaKnown RBP12.25□□□□□ -0.45
PTPRK-221ENST00000532331 PFDN4Q9NQP4 134 aa12.25□□□□□ -0.45
PTPRK-221ENST00000532331 COPB1P53618 953 aaKnown RBP12.25□□□□□ -0.45
PTPRK-221ENST00000532331 MAP7D3Q8IWC1 876 aa12.25□□□□□ -0.45
PTPRK-221ENST00000532331 GANCQ8TET4 914 aa12.25□□□□□ -0.45
PTPRK-221ENST00000532331 P3H4Q92791 437 aa12.25□□□□□ -0.45
PTPRK-221ENST00000532331 STMN2Q93045 179 aa12.25□□□□□ -0.45
PTPRK-221ENST00000532331 ZNF512BQ96KM6 892 aaPredicted RBP12.25□□□□□ -0.45
PTPRK-221ENST00000532331 VPS33BQ9H267 617 aa12.25□□□□□ -0.45
PTPRK-221ENST00000532331 HAUS4Q9H6D7 363 aa12.25□□□□□ -0.45
PTPRK-221ENST00000532331 JPH1Q9HDC5 661 aaPredicted RBP12.25□□□□□ -0.45
PTPRK-221ENST00000532331 KRT10P13645 584 aa12.24□□□□□ -0.45
PTPRK-221ENST00000532331 GCLCP48506 637 aaPredicted RBP12.24□□□□□ -0.45
PTPRK-221ENST00000532331 SLC12A2P55011 1212 aa12.24□□□□□ -0.45
PTPRK-221ENST00000532331 CNOT6LQ96LI5 555 aaKnown RBP12.24□□□□□ -0.45
PTPRK-221ENST00000532331 TMEM260Q9NX78 707 aa12.24□□□□□ -0.45
PTPRK-221ENST00000532331 GDAQ9Y2T3 454 aa12.24□□□□□ -0.45
PTPRK-221ENST00000532331 GGPS1O95749 300 aa12.24□□□□□ -0.45
PTPRK-221ENST00000532331 STAT5BP51692 787 aa12.24□□□□□ -0.45
PTPRK-221ENST00000532331 PPFIA1Q13136 1202 aa12.24□□□□□ -0.45
PTPRK-221ENST00000532331 LY9Q9HBG7 655 aa12.24□□□□□ -0.45
PTPRK-221ENST00000532331 SLC38A10Q9HBR0 1119 aa12.24□□□□□ -0.45
PTPRK-221ENST00000532331 BARHL2Q9NY43 387 aa12.24□□□□□ -0.45
PTPRK-221ENST00000532331 PCDHB6Q9Y5E3 794 aa12.24□□□□□ -0.45
PTPRK-221ENST00000532331 PCDHA5Q9Y5H7 936 aa12.24□□□□□ -0.45
PTPRK-221ENST00000532331 PCDHA10Q9Y5I2 948 aa12.24□□□□□ -0.45
PTPRK-221ENST00000532331 USP32Q8NFA0 1604 aa12.24□□□□□ -0.45
PTPRK-221ENST00000532331 CEMIPQ8WUJ3 1361 aa12.24□□□□□ -0.45
PTPRK-221ENST00000532331 I3L4J1 428 aa12.24□□□□□ -0.45
PTPRK-221ENST00000532331 KRIT1O00522 736 aa12.24□□□□□ -0.45
PTPRK-221ENST00000532331 PFDN6O15212 129 aa12.24□□□□□ -0.45
PTPRK-221ENST00000532331 CIITAP33076 1130 aa12.24□□□□□ -0.45
PTPRK-221ENST00000532331 CDC42EP1Q00587 391 aa12.24□□□□□ -0.45
PTPRK-221ENST00000532331 PPFIBP2Q8ND30 876 aa12.24□□□□□ -0.45
PTPRK-221ENST00000532331 MYRIPQ8NFW9 859 aa12.24□□□□□ -0.45
PTPRK-221ENST00000532331 PRMT6Q96LA8 375 aaPredicted RBP12.24□□□□□ -0.45
PTPRK-221ENST00000532331 GLT1D1Q96MS3 346 aa12.24□□□□□ -0.45
PTPRK-221ENST00000532331 AIFM3Q96NN9 605 aa12.24□□□□□ -0.45
PTPRK-221ENST00000532331 PPP2R2CQ9Y2T4 447 aa12.24□□□□□ -0.45
PTPRK-221ENST00000532331 GPR75-ASB3A0A0A6YYF3 556 aa12.24□□□□□ -0.45
PTPRK-221ENST00000532331 HUS1O60921 280 aa12.24□□□□□ -0.45
PTPRK-221ENST00000532331 HOXA7P31268 230 aaPredicted RBP12.24□□□□□ -0.45
PTPRK-221ENST00000532331 CUL4BQ13620 913 aa12.24□□□□□ -0.45
PTPRK-221ENST00000532331 SCARA5Q6ZMJ2 495 aa12.24□□□□□ -0.45
PTPRK-221ENST00000532331 C16orf86Q6ZW13 317 aa12.24□□□□□ -0.45
PTPRK-221ENST00000532331 P2RX5Q93086 422 aa12.24□□□□□ -0.45
PTPRK-221ENST00000532331 MKRN1Q9UHC7 482 aaKnown RBP12.24□□□□□ -0.45
PTPRK-221ENST00000532331 DDX41Q9UJV9 622 aaKnown RBP12.24□□□□□ -0.45
PTPRK-221ENST00000532331 TMEM131LA2VDJ0 1609 aa12.24□□□□□ -0.45
PTPRK-221ENST00000532331 GOLGA8IPA6NC78 632 aa12.24□□□□□ -0.45
PTPRK-221ENST00000532331 GOLGA8JA6NMD2 632 aa12.24□□□□□ -0.45
PTPRK-221ENST00000532331 IFNB1P01574 187 aa12.24□□□□□ -0.45
PTPRK-221ENST00000532331 ACTN1P12814 892 aa12.24□□□□□ -0.45
PTPRK-221ENST00000532331 CD58P19256 250 aa12.24□□□□□ -0.45
PTPRK-221ENST00000532331 FKBP3Q00688 224 aaKnown RBP12.24□□□□□ -0.45
PTPRK-221ENST00000532331 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.24□□□□□ -0.45
PTPRK-221ENST00000532331 ATP2A3Q93084 1043 aa12.24□□□□□ -0.45
PTPRK-221ENST00000532331 DESI2Q9BSY9 194 aa12.24□□□□□ -0.45
PTPRK-221ENST00000532331 BZW2Q9Y6E2 419 aaKnown RBP12.24□□□□□ -0.45
PTPRK-221ENST00000532331 IQGAP1P46940 1657 aa12.23□□□□□ -0.45
PTPRK-221ENST00000532331 MXI1P50539 228 aa12.23□□□□□ -0.45
PTPRK-221ENST00000532331 GNASQ5JWF2 1037 aa12.23□□□□□ -0.45
PTPRK-221ENST00000532331 DPF3Q92784 378 aa12.23□□□□□ -0.45
PTPRK-221ENST00000532331 TUBGCP2Q9BSJ2 902 aa12.23□□□□□ -0.45
PTPRK-221ENST00000532331 SPDYE2BA6NHP3 402 aa12.23□□□□□ -0.45
PTPRK-221ENST00000532331 MANSC4A6NHS7 340 aaPredicted RBP12.23□□□□□ -0.45
PTPRK-221ENST00000532331 BUB1O43683 1085 aa12.23□□□□□ -0.45
PTPRK-221ENST00000532331 SPDYE6P0CI01 402 aa12.23□□□□□ -0.45
PTPRK-221ENST00000532331 CPT1AP50416 773 aa12.23□□□□□ -0.45
PTPRK-221ENST00000532331 GOLGA8FQ08AF8 430 aa12.23□□□□□ -0.45
PTPRK-221ENST00000532331 GOLGA8DPQ0D2H9 430 aa12.23□□□□□ -0.45
PTPRK-221ENST00000532331 GPT2Q8TD30 523 aa12.23□□□□□ -0.45
PTPRK-221ENST00000532331 SMARCAD1Q9H4L7 1026 aa12.23□□□□□ -0.45
PTPRK-221ENST00000532331 LMCD1Q9NZU5 365 aa12.23□□□□□ -0.45
PTPRK-221ENST00000532331 SRPRBQ9Y5M8 271 aaKnown RBP12.23□□□□□ -0.45
PTPRK-221ENST00000532331 SFI1A8K8P3 1242 aa12.23□□□□□ -0.45
PTPRK-221ENST00000532331 TCP1P17987 556 aaKnown RBP12.23□□□□□ -0.45
PTPRK-221ENST00000532331 ZNF543Q08ER8 600 aa12.23□□□□□ -0.45
PTPRK-221ENST00000532331 PDIA6Q15084 440 aa12.23□□□□□ -0.45
PTPRK-221ENST00000532331 ZNF667Q5HYK9 610 aa12.23□□□□□ -0.45
PTPRK-221ENST00000532331 TTBK2Q6IQ55 1244 aa12.23□□□□□ -0.45
PTPRK-221ENST00000532331 RINT1Q6NUQ1 792 aa12.23□□□□□ -0.45
PTPRK-221ENST00000532331 PPP1R2P3Q6NXS1 205 aa12.23□□□□□ -0.45
PTPRK-221ENST00000532331 PLEKHH3Q7Z736 793 aa12.23□□□□□ -0.45
PTPRK-221ENST00000532331 TTC30AQ86WT1 665 aa12.23□□□□□ -0.45
PTPRK-221ENST00000532331 PALM2Q8IXS6 379 aa12.23□□□□□ -0.45
PTPRK-221ENST00000532331 PLCB4Q15147 1175 aa12.23□□□□□ -0.45
PTPRK-221ENST00000532331 KRT71Q3SY84 523 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms