RNA–Protein interactions for RNA: ENST00000531467.5

ABCA7-214, Transcript of ATP binding cassette subfamily A member 7, human

TSL 5

Gene ABCA7, Length 569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Exosome, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCA7-214	ENST00000531467	HOXC8	P31273	242 aa		15.1	■□□□□ 0.01
ABCA7-214	ENST00000531467	BMPR1A	P36894	532 aa		15.1	■□□□□ 0.01
ABCA7-214	ENST00000531467	CLK2	P49760	499 aa	Known RBP	15.1	■□□□□ 0.01
ABCA7-214	ENST00000531467	AP3B2	Q13367	1082 aa		15.1	■□□□□ 0.01
ABCA7-214	ENST00000531467	MTMR1	Q13613	665 aa		15.1	■□□□□ 0.01
ABCA7-214	ENST00000531467	PKN1	Q16512	942 aa		15.1	■□□□□ 0.01
ABCA7-214	ENST00000531467	GIMAP8	Q8ND71	665 aa	Predicted RBP	15.1	■□□□□ 0.01
ABCA7-214	ENST00000531467	EDA	Q92838	391 aa		15.1	■□□□□ 0.01
ABCA7-214	ENST00000531467	APBB2	Q92870	758 aa		15.1	■□□□□ 0.01
ABCA7-214	ENST00000531467	PHKB	Q93100	1093 aa		15.1	■□□□□ 0.01
ABCA7-214	ENST00000531467	PGBD1	Q96JS3	809 aa		15.1	■□□□□ 0.01
ABCA7-214	ENST00000531467	C11orf84	Q9BUA3	381 aa	Predicted RBP	15.1	■□□□□ 0.01
ABCA7-214	ENST00000531467	RNF26	Q9BY78	433 aa	Predicted RBP	15.1	■□□□□ 0.01
ABCA7-214	ENST00000531467	LMAN2L	Q9H0V9	348 aa		15.1	■□□□□ 0.01
ABCA7-214	ENST00000531467	CSPG5	O95196	566 aa		15.09	■□□□□ 0.01
ABCA7-214	ENST00000531467	GTF2F1	P35269	517 aa	Known RBP eCLIP	15.09	■□□□□ 0.01
ABCA7-214	ENST00000531467	CCT2	P78371	535 aa	Known RBP	15.09	■□□□□ 0.01
ABCA7-214	ENST00000531467	AKAP17A	Q02040	695 aa	Known RBP	15.09	■□□□□ 0.01
ABCA7-214	ENST00000531467	SP4	Q02446	784 aa		15.09	■□□□□ 0.01
ABCA7-214	ENST00000531467	SMAD4	Q13485	552 aa	Known RBP	15.09	■□□□□ 0.01
ABCA7-214	ENST00000531467	PRSS33	Q8NF86	280 aa		15.09	■□□□□ 0.01
ABCA7-214	ENST00000531467	ZMYND12	Q9H0C1	365 aa		15.09	■□□□□ 0.01
ABCA7-214	ENST00000531467	NCOA5	Q9HCD5	579 aa	Known RBP	15.09	■□□□□ 0.01
ABCA7-214	ENST00000531467	PDRG1	Q9NUG6	133 aa		15.09	■□□□□ 0.01
ABCA7-214	ENST00000531467	SETD4	Q9NVD3	440 aa		15.09	■□□□□ 0.01
ABCA7-214	ENST00000531467	TMEM260	Q9NX78	707 aa		15.09	■□□□□ 0.01
ABCA7-214	ENST00000531467	TELO2	Q9Y4R8	837 aa		15.09	■□□□□ 0.01
ABCA7-214	ENST00000531467	NLRC5	Q86WI3	1866 aa		15.08	■□□□□ 0.01
ABCA7-214	ENST00000531467	LINC01565	O15544	149 aa		15.08	■□□□□ 0
ABCA7-214	ENST00000531467	TBX10	O75333	385 aa		15.08	■□□□□ 0
ABCA7-214	ENST00000531467	GNAT1	P11488	350 aa		15.08	■□□□□ 0
ABCA7-214	ENST00000531467	SREBF1	P36956	1147 aa		15.08	■□□□□ 0
ABCA7-214	ENST00000531467	IER5L	Q5T953	404 aa		15.08	■□□□□ 0
ABCA7-214	ENST00000531467	CCDC12	Q8WUD4	166 aa	Predicted RBP	15.08	■□□□□ 0
ABCA7-214	ENST00000531467	PBXIP1	Q96AQ6	731 aa		15.08	■□□□□ 0
ABCA7-214	ENST00000531467	ZNF274	Q96GC6	653 aa	Predicted RBP	15.08	■□□□□ 0
ABCA7-214	ENST00000531467	MXRA8	Q9BRK3	442 aa		15.08	■□□□□ 0
ABCA7-214	ENST00000531467	SLC26A6	Q9BXS9	759 aa		15.08	■□□□□ 0
ABCA7-214	ENST00000531467	CD207	Q9UJ71	328 aa		15.08	■□□□□ 0
ABCA7-214	ENST00000531467	RWDD3	Q9Y3V2	267 aa		15.08	■□□□□ 0
ABCA7-214	ENST00000531467	ZNF318	Q5VUA4	2279 aa		15.08	■□□□□ 0
ABCA7-214	ENST00000531467	PPFIA3	O75145	1194 aa		15.07	■□□□□ 0
ABCA7-214	ENST00000531467	LINC00271	P0C7V0	271 aa		15.07	■□□□□ 0
ABCA7-214	ENST00000531467	PTPN5	P54829	565 aa		15.07	■□□□□ 0
ABCA7-214	ENST00000531467	ANAPC15	P60006	121 aa		15.07	■□□□□ 0
ABCA7-214	ENST00000531467	CEP55	Q53EZ4	464 aa		15.07	■□□□□ 0
ABCA7-214	ENST00000531467	FAM26D	Q5JW98	314 aa		15.07	■□□□□ 0
ABCA7-214	ENST00000531467	JAKMIP3	Q5VZ66	844 aa		15.07	■□□□□ 0
ABCA7-214	ENST00000531467	BMP8A	Q7Z5Y6	402 aa		15.07	■□□□□ 0
ABCA7-214	ENST00000531467	TRIM50	Q86XT4	487 aa		15.07	■□□□□ 0
ABCA7-214	ENST00000531467	CYP2W1	Q8TAV3	490 aa		15.07	■□□□□ 0
ABCA7-214	ENST00000531467	LARP6	Q9BRS8	491 aa	Known RBP	15.07	■□□□□ 0
ABCA7-214	ENST00000531467	C6orf50	Q9HD87	102 aa		15.07	■□□□□ 0
ABCA7-214	ENST00000531467	KCNH7	Q9NS40	1196 aa		15.07	■□□□□ 0
ABCA7-214	ENST00000531467	PKD2L1	Q9P0L9	805 aa		15.07	■□□□□ 0
ABCA7-214	ENST00000531467	ZNF215	Q9UL58	517 aa	Predicted RBP	15.07	■□□□□ 0
ABCA7-214	ENST00000531467	RALGAPA2	Q2PPJ7	1873 aa		15.07	■□□□□ 0
ABCA7-214	ENST00000531467	MYO7A	Q13402	2215 aa		15.07	■□□□□ 0
ABCA7-214	ENST00000531467	DOCK5	Q9H7D0	1870 aa		15.06	■□□□□ 0
ABCA7-214	ENST00000531467	TMEM221	A6NGB7	291 aa		15.06	■□□□□ 0
ABCA7-214	ENST00000531467		M0R296	226 aa		15.06	■□□□□ 0
ABCA7-214	ENST00000531467	GNA11	P29992	359 aa		15.06	■□□□□ 0
ABCA7-214	ENST00000531467	TCF7	P36402	384 aa	Predicted RBP	15.06	■□□□□ 0
ABCA7-214	ENST00000531467	NDUFV1	P49821	464 aa		15.06	■□□□□ 0
ABCA7-214	ENST00000531467	ARHGAP4	P98171	946 aa		15.06	■□□□□ 0
ABCA7-214	ENST00000531467	ADAM15	Q13444	863 aa		15.06	■□□□□ 0
ABCA7-214	ENST00000531467	UTP14C	Q5TAP6	766 aa	Known RBP	15.06	■□□□□ 0
ABCA7-214	ENST00000531467	TRIM67	Q6ZTA4	783 aa		15.06	■□□□□ 0
ABCA7-214	ENST00000531467	CCDC148	Q8NFR7	591 aa		15.06	■□□□□ 0
ABCA7-214	ENST00000531467	SEPT1	Q8WYJ6	367 aa		15.06	■□□□□ 0
ABCA7-214	ENST00000531467	CLP1	Q92989	425 aa	Known RBP	15.06	■□□□□ 0
ABCA7-214	ENST00000531467	ALG13	Q9NP73	1137 aa	Known RBP	15.06	■□□□□ 0
ABCA7-214	ENST00000531467	ADGRA3	Q8IWK6	1321 aa		15.06	■□□□□ 0
ABCA7-214	ENST00000531467	USP34	Q70CQ2	3546 aa		15.05	■□□□□ 0
ABCA7-214	ENST00000531467	GSTTP1	A0A1W2PQM5	241 aa		15.05	■□□□□ -0
ABCA7-214	ENST00000531467	MEIS1	O00470	390 aa		15.05	■□□□□ -0
ABCA7-214	ENST00000531467	CPLX1	O14810	134 aa		15.05	■□□□□ -0
ABCA7-214	ENST00000531467	ADAMTS3	O15072	1205 aa		15.05	■□□□□ -0
ABCA7-214	ENST00000531467	ST18	O60284	1047 aa		15.05	■□□□□ -0
ABCA7-214	ENST00000531467	EIF5B	O60841	1220 aa	Known RBP	15.05	■□□□□ -0
ABCA7-214	ENST00000531467	CHRNA1	P02708	482 aa		15.05	■□□□□ -0
ABCA7-214	ENST00000531467	MMP1	P03956	469 aa		15.05	■□□□□ -0
ABCA7-214	ENST00000531467	AR	P10275	920 aa		15.05	■□□□□ -0
ABCA7-214	ENST00000531467	GHR	P10912	638 aa		15.05	■□□□□ -0
ABCA7-214	ENST00000531467	BTG3	Q14201	252 aa	Predicted RBP	15.05	■□□□□ -0
ABCA7-214	ENST00000531467	MCTP2	Q6DN12	878 aa		15.05	■□□□□ -0
ABCA7-214	ENST00000531467	SUGP1	Q8IWZ8	645 aa	Known RBP	15.05	■□□□□ -0
ABCA7-214	ENST00000531467	TRIM22	Q8IYM9	498 aa		15.05	■□□□□ -0
ABCA7-214	ENST00000531467	REXO1	Q8N1G1	1221 aa	Known RBP	15.05	■□□□□ -0
ABCA7-214	ENST00000531467	CRYGN	Q8WXF5	182 aa		15.05	■□□□□ -0
ABCA7-214	ENST00000531467	PRRX2	Q99811	253 aa		15.05	■□□□□ -0
ABCA7-214	ENST00000531467	JPH1	Q9HDC5	661 aa	Predicted RBP	15.05	■□□□□ -0
ABCA7-214	ENST00000531467	SH3GLB2	Q9NR46	395 aa		15.05	■□□□□ -0
ABCA7-214	ENST00000531467	VPS54	Q9P1Q0	977 aa		15.05	■□□□□ -0
ABCA7-214	ENST00000531467	NFASC	O94856	1347 aa		15.04	■□□□□ -0
ABCA7-214	ENST00000531467	ENPP3	O14638	875 aa		15.04	■□□□□ -0
ABCA7-214	ENST00000531467	EYA4	O95677	639 aa		15.04	■□□□□ -0
ABCA7-214	ENST00000531467	CYP3A4	P08684	503 aa		15.04	■□□□□ -0
ABCA7-214	ENST00000531467	ZNF76	P36508	570 aa		15.04	■□□□□ -0
ABCA7-214	ENST00000531467	ADAM17	P78536	824 aa		15.04	■□□□□ -0

Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms