RNA–Protein interactions for RNA: ENST00000530927.5

GMDS-208, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GMDS, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-208ENST00000530927 EML1O00423 815 aa21.13■□□□□ 0.97
GMDS-208ENST00000530927 RSPH10BP0C881 870 aa21.13■□□□□ 0.97
GMDS-208ENST00000530927 RFC2P35250 354 aa21.13■□□□□ 0.97
GMDS-208ENST00000530927 CKAP2LQ8IYA6 745 aa21.13■□□□□ 0.97
GMDS-208ENST00000530927 ATP8B4Q8TF62 1192 aa21.13■□□□□ 0.97
GMDS-208ENST00000530927 FAM161BQ96MY7 647 aa21.13■□□□□ 0.97
GMDS-208ENST00000530927 FAM49AQ9H0Q0 323 aaPredicted RBP21.13■□□□□ 0.97
GMDS-208ENST00000530927 TMEM150BA6NC51 233 aa21.12■□□□□ 0.97
GMDS-208ENST00000530927 TMEM62Q0P6H9 643 aa21.12■□□□□ 0.97
GMDS-208ENST00000530927 MIER3Q7Z3K6 550 aa21.12■□□□□ 0.97
GMDS-208ENST00000530927 TMCO2Q7Z6W1 182 aaPredicted RBP21.12■□□□□ 0.97
GMDS-208ENST00000530927 GBF1Q92538 1859 aa21.12■□□□□ 0.97
GMDS-208ENST00000530927 PTPRSQ13332 1948 aa21.12■□□□□ 0.97
GMDS-208ENST00000530927 CHRNA1P02708 482 aa21.12■□□□□ 0.97
GMDS-208ENST00000530927 CXCL10P02778 98 aa21.12■□□□□ 0.97
GMDS-208ENST00000530927 GCFC2P16383 781 aaKnown RBP21.12■□□□□ 0.97
GMDS-208ENST00000530927 RABGGTBP53611 331 aa21.12■□□□□ 0.97
GMDS-208ENST00000530927 MYH9P35579 1960 aaKnown RBP21.11■□□□□ 0.97
GMDS-208ENST00000530927 RRN3P2A6NIE6 340 aa21.11■□□□□ 0.97
GMDS-208ENST00000530927 HBP1O60381 514 aa21.11■□□□□ 0.97
GMDS-208ENST00000530927 SLC34A2O95436 690 aa21.11■□□□□ 0.97
GMDS-208ENST00000530927 PFKMP08237 780 aa21.11■□□□□ 0.97
GMDS-208ENST00000530927 GJB2P29033 226 aa21.11■□□□□ 0.97
GMDS-208ENST00000530927 SLC26A2P50443 739 aa21.11■□□□□ 0.97
GMDS-208ENST00000530927 SMAD3P84022 425 aaKnown RBP21.11■□□□□ 0.97
GMDS-208ENST00000530927 PRKCEQ02156 737 aa21.11■□□□□ 0.97
GMDS-208ENST00000530927 NBR1Q14596 966 aa21.11■□□□□ 0.97
GMDS-208ENST00000530927 SAFBQ15424 915 aaKnown RBP eCLIP21.11■□□□□ 0.972e-6■■□□□ 13.3
GMDS-208ENST00000530927 MTHFD1LQ6UB35 978 aa21.11■□□□□ 0.97
GMDS-208ENST00000530927 BANK1Q8NDB2 785 aa21.11■□□□□ 0.97
GMDS-208ENST00000530927 SH2D3AQ9BRG2 576 aa21.11■□□□□ 0.97
GMDS-208ENST00000530927 TMEM60Q9H2L4 133 aa21.11■□□□□ 0.97
GMDS-208ENST00000530927 CHD9Q3L8U1 2897 aa21.11■□□□□ 0.97
GMDS-208ENST00000530927 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.1■□□□□ 0.97
GMDS-208ENST00000530927 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.1■□□□□ 0.97
GMDS-208ENST00000530927 MYOGP15173 224 aa21.1■□□□□ 0.97
GMDS-208ENST00000530927 KLRC1P26715 233 aa21.1■□□□□ 0.97
GMDS-208ENST00000530927 SFNP31947 248 aa21.1■□□□□ 0.97
GMDS-208ENST00000530927 JAK3P52333 1124 aa21.1■□□□□ 0.97
GMDS-208ENST00000530927 MGAT3Q09327 533 aa21.1■□□□□ 0.97
GMDS-208ENST00000530927 DEFB123Q8N688 67 aa21.1■□□□□ 0.97
GMDS-208ENST00000530927 PBX4Q9BYU1 374 aa21.1■□□□□ 0.97
GMDS-208ENST00000530927 SLC4A7Q9Y6M7 1214 aa21.1■□□□□ 0.97
GMDS-208ENST00000530927 MCM7P33993 719 aa21.09■□□□□ 0.97
GMDS-208ENST00000530927 MCM2P49736 904 aa21.09■□□□□ 0.97
GMDS-208ENST00000530927 DEFB103AP81534 67 aa21.09■□□□□ 0.97
GMDS-208ENST00000530927 SPIRE1Q08AE8 756 aa21.09■□□□□ 0.97
GMDS-208ENST00000530927 TAF2Q6P1X5 1199 aa21.09■□□□□ 0.97
GMDS-208ENST00000530927 DBF4BQ8NFT6 615 aa21.09■□□□□ 0.97
GMDS-208ENST00000530927 FAM20AQ96MK3 541 aa21.09■□□□□ 0.97
GMDS-208ENST00000530927 PPP1R16BQ96T49 567 aa21.09■□□□□ 0.97
GMDS-208ENST00000530927 TTYH1Q9H313 450 aaPredicted RBP21.09■□□□□ 0.97
GMDS-208ENST00000530927 WRAP73Q9P2S5 460 aaPredicted RBP21.09■□□□□ 0.97
GMDS-208ENST00000530927 PCDHA2Q9Y5H9 948 aa21.09■□□□□ 0.97
GMDS-208ENST00000530927 CDY2AQ9Y6F7 541 aa21.09■□□□□ 0.97
GMDS-208ENST00000530927 EYSQ5T1H1 3165 aa21.08■□□□□ 0.97
GMDS-208ENST00000530927 MARCH6O60337 910 aa21.08■□□□□ 0.97
GMDS-208ENST00000530927 STBD1O95210 358 aa21.08■□□□□ 0.97
GMDS-208ENST00000530927 C22orf31O95567 290 aa21.08■□□□□ 0.97
GMDS-208ENST00000530927 OATP04181 439 aa21.08■□□□□ 0.97
GMDS-208ENST00000530927 GHRP10912 638 aa21.08■□□□□ 0.97
GMDS-208ENST00000530927 DNAJB2P25686 324 aa21.08■□□□□ 0.97
GMDS-208ENST00000530927 PPP2R5CQ13362 524 aa21.08■□□□□ 0.97
GMDS-208ENST00000530927 ZNF174Q15697 407 aa21.08■□□□□ 0.97
GMDS-208ENST00000530927 FAM26DQ5JW98 314 aa21.08■□□□□ 0.97
GMDS-208ENST00000530927 NCAPH2Q6IBW4 605 aa21.08■□□□□ 0.97
GMDS-208ENST00000530927 CNKSR3Q6P9H4 555 aa21.08■□□□□ 0.97
GMDS-208ENST00000530927 BBXQ8WY36 941 aaPredicted RBP21.08■□□□□ 0.97
GMDS-208ENST00000530927 FOXP1Q9H334 677 aaPredicted RBP21.08■□□□□ 0.97
GMDS-208ENST00000530927 YBX2Q9Y2T7 364 aaKnown RBP21.08■□□□□ 0.97
GMDS-208ENST00000530927 NEMFO60524 1076 aa21.07■□□□□ 0.96
GMDS-208ENST00000530927 ACTN1P12814 892 aa21.07■□□□□ 0.96
GMDS-208ENST00000530927 ATP2A2P16615 1042 aaKnown RBP21.07■□□□□ 0.96
GMDS-208ENST00000530927 WDR5P61964 334 aaKnown RBP21.07■□□□□ 0.96
GMDS-208ENST00000530927 CALCRLQ16602 461 aa21.07■□□□□ 0.96
GMDS-208ENST00000530927 PLEKHG4Q58EX7 1191 aa21.07■□□□□ 0.96
GMDS-208ENST00000530927 ZNF484Q5JVG2 852 aa21.07■□□□□ 0.96
GMDS-208ENST00000530927 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.07■□□□□ 0.967e-11■■■■■ 39.5
GMDS-208ENST00000530927 RPAINQ86UA6 219 aa21.07■□□□□ 0.96
GMDS-208ENST00000530927 NOSTRINQ8IVI9 506 aa21.07■□□□□ 0.96
GMDS-208ENST00000530927 NAP1L4Q99733 375 aaKnown RBP21.07■□□□□ 0.96
GMDS-208ENST00000530927 COL6A3P12111 3177 aa21.07■□□□□ 0.96
GMDS-208ENST00000530927 COL1A2P08123 1366 aa21.07■□□□□ 0.96
GMDS-208ENST00000530927 TBX3O15119 743 aa21.06■□□□□ 0.96
GMDS-208ENST00000530927 CAND2O75155 1236 aa21.06■□□□□ 0.96
GMDS-208ENST00000530927 TXKP42681 527 aa21.06■□□□□ 0.96
GMDS-208ENST00000530927 MRPS6P82932 125 aaKnown RBP21.06■□□□□ 0.96
GMDS-208ENST00000530927 GNL2Q13823 731 aaKnown RBP21.06■□□□□ 0.96
GMDS-208ENST00000530927 LPIN1Q14693 890 aa21.06■□□□□ 0.96
GMDS-208ENST00000530927 MTMR9Q96QG7 549 aa21.06■□□□□ 0.96
GMDS-208ENST00000530927 MTIF3Q9H2K0 278 aaKnown RBP21.06■□□□□ 0.96
GMDS-208ENST00000530927 CDHR5Q9HBB8 845 aa21.06■□□□□ 0.96
GMDS-208ENST00000530927 RGL1Q9NZL6 768 aa21.06■□□□□ 0.96
GMDS-208ENST00000530927 SEPT9Q9UHD8 586 aaPredicted RBP21.06■□□□□ 0.96
GMDS-208ENST00000530927 EVPLQ92817 2033 aa21.06■□□□□ 0.96
GMDS-208ENST00000530927 CHD7Q9P2D1 2997 aa21.06■□□□□ 0.96
GMDS-208ENST00000530927 PARNO95453 639 aaKnown RBP21.05■□□□□ 0.96
GMDS-208ENST00000530927 CLCN3P51790 818 aa21.05■□□□□ 0.96
GMDS-208ENST00000530927 PLA2G4FQ68DD2 849 aa21.05■□□□□ 0.96
GMDS-208ENST00000530927 KIAA0319LQ8IZA0 1049 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms