RNA–Protein interactions for RNA: ENST00000530861.5

BDNF-215, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,918 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-215ENST00000530861 RNF146Q9NTX7 359 aa13.77□□□□□ -0.2
BDNF-215ENST00000530861 LIMA1Q9UHB6 759 aaKnown RBP13.77□□□□□ -0.2
BDNF-215ENST00000530861 RPS6P62753 249 aaKnown RBP13.77□□□□□ -0.21
BDNF-215ENST00000530861 FAM182AQ5T1J6 154 aa13.77□□□□□ -0.21
BDNF-215ENST00000530861 RNF187Q5TA31 235 aaPredicted RBP13.77□□□□□ -0.21
BDNF-215ENST00000530861 MOB2Q70IA6 237 aa13.77□□□□□ -0.21
BDNF-215ENST00000530861 ZDHHC15Q96MV8 337 aa13.77□□□□□ -0.21
BDNF-215ENST00000530861 GBP3Q9H0R5 595 aa13.77□□□□□ -0.21
BDNF-215ENST00000530861 GABBR1Q9UBS5 961 aa13.77□□□□□ -0.21
BDNF-215ENST00000530861 WNT10BO00744 389 aa13.77□□□□□ -0.21
BDNF-215ENST00000530861 IRX5P78411 483 aaPredicted RBP13.77□□□□□ -0.21
BDNF-215ENST00000530861 POTEAQ6S8J7 498 aa13.77□□□□□ -0.21
BDNF-215ENST00000530861 HDXQ7Z353 690 aa13.77□□□□□ -0.21
BDNF-215ENST00000530861 C4orf32Q8N8J7 132 aa13.77□□□□□ -0.21
BDNF-215ENST00000530861 PNKPQ96T60 521 aa13.77□□□□□ -0.21
BDNF-215ENST00000530861 ZNRF3Q9ULT6 936 aa13.77□□□□□ -0.21
BDNF-215ENST00000530861 ZSCAN5CA6NGD5 496 aaPredicted RBP13.76□□□□□ -0.21
BDNF-215ENST00000530861 TADA3O75528 432 aa13.76□□□□□ -0.21
BDNF-215ENST00000530861 AFPP02771 609 aaKnown RBP13.76□□□□□ -0.21
BDNF-215ENST00000530861 CRY2Q49AN0 593 aa13.76□□□□□ -0.21
BDNF-215ENST00000530861 SCARA5Q6ZMJ2 495 aa13.76□□□□□ -0.21
BDNF-215ENST00000530861 C10orf67Q8IYJ2 551 aa13.76□□□□□ -0.21
BDNF-215ENST00000530861 TMEM143Q96AN5 459 aa13.76□□□□□ -0.21
BDNF-215ENST00000530861 PAIP2Q9BPZ3 127 aaKnown RBP13.76□□□□□ -0.21
BDNF-215ENST00000530861 HIP1RO75146 1068 aa13.76□□□□□ -0.21
BDNF-215ENST00000530861 FOSP01100 380 aaPredicted RBP13.76□□□□□ -0.21
BDNF-215ENST00000530861 CKAP4Q07065 602 aaKnown RBP13.76□□□□□ -0.21
BDNF-215ENST00000530861 MAP9Q49MG5 647 aa13.76□□□□□ -0.21
BDNF-215ENST00000530861 CDKAL1Q5VV42 579 aa13.76□□□□□ -0.21
BDNF-215ENST00000530861 MKRN1Q9UHC7 482 aaKnown RBP13.76□□□□□ -0.21
BDNF-215ENST00000530861 A0A087X0T9 212 aa13.76□□□□□ -0.21
BDNF-215ENST00000530861 SPDYE2BA6NHP3 402 aa13.76□□□□□ -0.21
BDNF-215ENST00000530861 FAM228BP0C875 321 aa13.76□□□□□ -0.21
BDNF-215ENST00000530861 SPDYE6P0CI01 402 aa13.76□□□□□ -0.21
BDNF-215ENST00000530861 TMOD1P28289 359 aa13.76□□□□□ -0.21
BDNF-215ENST00000530861 SMTNP53814 917 aa13.76□□□□□ -0.21
BDNF-215ENST00000530861 KNOP1Q1ED39 458 aaKnown RBP13.76□□□□□ -0.21
BDNF-215ENST00000530861 DDX42Q86XP3 938 aaKnown RBP eCLIP13.76□□□□□ -0.21
BDNF-215ENST00000530861 SLC30A5Q8TAD4 765 aa13.76□□□□□ -0.21
BDNF-215ENST00000530861 SYNCQ9H7C4 482 aa13.76□□□□□ -0.21
BDNF-215ENST00000530861 KLRC4O43908 158 aa13.75□□□□□ -0.21
BDNF-215ENST00000530861 KAZNQ674X7 775 aa13.75□□□□□ -0.21
BDNF-215ENST00000530861 PPP4R3AQ6IN85 833 aa13.75□□□□□ -0.21
BDNF-215ENST00000530861 CCDC114Q96M63 670 aa13.75□□□□□ -0.21
BDNF-215ENST00000530861 MYOZ2Q9NPC6 264 aa13.75□□□□□ -0.21
BDNF-215ENST00000530861 GGA3Q9NZ52 723 aa13.75□□□□□ -0.21
BDNF-215ENST00000530861 DNAJC12Q9UKB3 198 aa13.75□□□□□ -0.21
BDNF-215ENST00000530861 NFU1Q9UMS0 254 aa13.75□□□□□ -0.21
BDNF-215ENST00000530861 PHLPP2Q6ZVD8 1323 aa13.75□□□□□ -0.21
BDNF-215ENST00000530861 GCFC2P16383 781 aaKnown RBP13.75□□□□□ -0.21
BDNF-215ENST00000530861 ACOT2P49753 483 aa13.75□□□□□ -0.21
BDNF-215ENST00000530861 POLGP54098 1239 aaPredicted RBP13.75□□□□□ -0.21
BDNF-215ENST00000530861 HP1BP3Q5SSJ5 553 aaPredicted RBP13.75□□□□□ -0.21
BDNF-215ENST00000530861 IL31RAQ8NI17 732 aa13.75□□□□□ -0.21
BDNF-215ENST00000530861 CCDC51Q96ER9 411 aa13.75□□□□□ -0.21
BDNF-215ENST00000530861 LRRC1Q9BTT6 524 aa13.75□□□□□ -0.21
BDNF-215ENST00000530861 APOL6Q9BWW8 343 aa13.75□□□□□ -0.21
BDNF-215ENST00000530861 DDX47Q9H0S4 455 aaKnown RBP13.75□□□□□ -0.21
BDNF-215ENST00000530861 KCNH7Q9NS40 1196 aa13.75□□□□□ -0.21
BDNF-215ENST00000530861 MRFAP1Q9Y605 127 aa13.75□□□□□ -0.21
BDNF-215ENST00000530861 PIK3R2O00459 728 aa13.75□□□□□ -0.21
BDNF-215ENST00000530861 H2AFZP0C0S5 128 aa13.75□□□□□ -0.21
BDNF-215ENST00000530861 NEFHP12036 1026 aa13.75□□□□□ -0.21
BDNF-215ENST00000530861 CTNNA2P26232 953 aa13.75□□□□□ -0.21
BDNF-215ENST00000530861 KLRC1P26715 233 aa13.75□□□□□ -0.21
BDNF-215ENST00000530861 HOXA10P31260 410 aaPredicted RBP13.75□□□□□ -0.21
BDNF-215ENST00000530861 VAV2P52735 878 aa13.75□□□□□ -0.21
BDNF-215ENST00000530861 H2AFVQ71UI9 128 aa13.75□□□□□ -0.21
BDNF-215ENST00000530861 RTKN2Q8IZC4 609 aa13.75□□□□□ -0.21
BDNF-215ENST00000530861 GUF1Q8N442 669 aaKnown RBP13.75□□□□□ -0.21
BDNF-215ENST00000530861 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.75□□□□□ -0.21
BDNF-215ENST00000530861 SCFD1Q8WVM8 642 aa13.75□□□□□ -0.21
BDNF-215ENST00000530861 HACL1Q9UJ83 578 aa13.75□□□□□ -0.21
BDNF-215ENST00000530861 KRIT1O00522 736 aa13.74□□□□□ -0.21
BDNF-215ENST00000530861 SMAD1Q15797 465 aaKnown RBP13.74□□□□□ -0.21
BDNF-215ENST00000530861 GPR162Q16538 588 aa13.74□□□□□ -0.21
BDNF-215ENST00000530861 KIAA1755Q5JYT7 1200 aa13.74□□□□□ -0.21
BDNF-215ENST00000530861 SH3RF1Q7Z6J0 888 aa13.74□□□□□ -0.21
BDNF-215ENST00000530861 THNSL1Q8IYQ7 743 aa13.74□□□□□ -0.21
BDNF-215ENST00000530861 HDAC7Q8WUI4 952 aa13.74□□□□□ -0.21
BDNF-215ENST00000530861 DCAF4Q8WV16 495 aa13.74□□□□□ -0.21
BDNF-215ENST00000530861 NLRP4Q96MN2 994 aa13.74□□□□□ -0.21
BDNF-215ENST00000530861 NACC1Q96RE7 527 aa13.74□□□□□ -0.21
BDNF-215ENST00000530861 C7orf25Q9BPX7 421 aa13.74□□□□□ -0.21
BDNF-215ENST00000530861 FAM213AQ9BRX8 229 aa13.74□□□□□ -0.21
BDNF-215ENST00000530861 ARHGAP20Q9P2F6 1191 aa13.74□□□□□ -0.21
BDNF-215ENST00000530861 NXF1Q9UBU9 619 aaKnown RBP13.74□□□□□ -0.21
BDNF-215ENST00000530861 AKAP3O75969 853 aa13.74□□□□□ -0.21
BDNF-215ENST00000530861 CC2D1AQ6P1N0 951 aaPredicted RBP13.74□□□□□ -0.21
BDNF-215ENST00000530861 SULF1Q8IWU6 871 aa13.74□□□□□ -0.21
BDNF-215ENST00000530861 CNKSR2Q8WXI2 1034 aa13.74□□□□□ -0.21
BDNF-215ENST00000530861 CUEDC2Q9H467 287 aa13.74□□□□□ -0.21
BDNF-215ENST00000530861 TRPC6Q9Y210 931 aa13.74□□□□□ -0.21
BDNF-215ENST00000530861 MEIS2O14770 477 aa13.74□□□□□ -0.21
BDNF-215ENST00000530861 SLCO1A2P46721 670 aa13.74□□□□□ -0.21
BDNF-215ENST00000530861 LIG4P49917 911 aa13.74□□□□□ -0.21
BDNF-215ENST00000530861 CFAP58Q5T655 872 aa13.74□□□□□ -0.21
BDNF-215ENST00000530861 PRPF38AQ8NAV1 312 aaKnown RBP13.74□□□□□ -0.21
BDNF-215ENST00000530861 TRIM58Q8NG06 486 aa13.74□□□□□ -0.21
BDNF-215ENST00000530861 KMT5AQ9NQR1 393 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms