RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 IQSEC2Q5JU85 1478 aa10.11□□□□□ -0.79
CSDE1-213ENST00000530784 CEP170BQ9Y4F5 1589 aaPredicted RBP10.11□□□□□ -0.79
CSDE1-213ENST00000530784 EFCAB14O75071 495 aa10.11□□□□□ -0.79
CSDE1-213ENST00000530784 HOXA5P20719 270 aa10.11□□□□□ -0.79
CSDE1-213ENST00000530784 SQSTM1Q13501 440 aa10.11□□□□□ -0.79
CSDE1-213ENST00000530784 TTLL7Q6ZT98 887 aa10.11□□□□□ -0.79
CSDE1-213ENST00000530784 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.11□□□□□ -0.79
CSDE1-213ENST00000530784 ZC3H7AQ8IWR0 971 aaKnown RBP10.11□□□□□ -0.79
CSDE1-213ENST00000530784 SCLYQ96I15 445 aa10.11□□□□□ -0.79
CSDE1-213ENST00000530784 XYLT2Q9H1B5 865 aa10.11□□□□□ -0.79
CSDE1-213ENST00000530784 SFMBT1Q9UHJ3 866 aa10.11□□□□□ -0.79
CSDE1-213ENST00000530784 CBLCQ9ULV8 474 aa10.11□□□□□ -0.79
CSDE1-213ENST00000530784 CCDC141Q6ZP82 1450 aa10.1□□□□□ -0.79
CSDE1-213ENST00000530784 OTOL1A6NHN0 477 aaPredicted RBP10.1□□□□□ -0.79
CSDE1-213ENST00000530784 RASGRP1O95267 797 aa10.1□□□□□ -0.79
CSDE1-213ENST00000530784 KCNC1P48547 511 aa10.1□□□□□ -0.79
CSDE1-213ENST00000530784 SARSP49591 514 aaKnown RBP10.1□□□□□ -0.79
CSDE1-213ENST00000530784 ARHGAP36Q6ZRI8 547 aa10.1□□□□□ -0.79
CSDE1-213ENST00000530784 KCTD1Q719H9 257 aa10.1□□□□□ -0.79
CSDE1-213ENST00000530784 C16orf59Q7L2K0 433 aa10.1□□□□□ -0.79
CSDE1-213ENST00000530784 OSTM1Q86WC4 334 aa10.1□□□□□ -0.79
CSDE1-213ENST00000530784 SH3TC2Q8TF17 1288 aa10.1□□□□□ -0.79
CSDE1-213ENST00000530784 MRPL4Q9BYD3 311 aaKnown RBP10.1□□□□□ -0.79
CSDE1-213ENST00000530784 PDGFDQ9GZP0 370 aaPredicted RBP10.1□□□□□ -0.79
CSDE1-213ENST00000530784 NCOA5Q9HCD5 579 aaKnown RBP10.1□□□□□ -0.79
CSDE1-213ENST00000530784 HSPBP1Q9NZL4 362 aa10.1□□□□□ -0.79
CSDE1-213ENST00000530784 CAMSAP2Q08AD1 1489 aa10.1□□□□□ -0.79
CSDE1-213ENST00000530784 NCOA2Q15596 1464 aa10.1□□□□□ -0.79
CSDE1-213ENST00000530784 PDE6AP16499 860 aa10.09□□□□□ -0.79
CSDE1-213ENST00000530784 FAHP16930 419 aa10.09□□□□□ -0.79
CSDE1-213ENST00000530784 EPHA5P54756 1037 aa10.09□□□□□ -0.79
CSDE1-213ENST00000530784 ST5P78524 1137 aa10.09□□□□□ -0.79
CSDE1-213ENST00000530784 GPR19Q15760 415 aa10.09□□□□□ -0.79
CSDE1-213ENST00000530784 PAN2Q504Q3 1202 aaKnown RBP10.09□□□□□ -0.79
CSDE1-213ENST00000530784 TMC5Q6UXY8 1006 aa10.09□□□□□ -0.79
CSDE1-213ENST00000530784 PROSER1Q86XN7 944 aa10.09□□□□□ -0.79
CSDE1-213ENST00000530784 ZDHHC14Q8IZN3 488 aa10.09□□□□□ -0.79
CSDE1-213ENST00000530784 MAGEB10Q96LZ2 347 aaPredicted RBP10.09□□□□□ -0.79
CSDE1-213ENST00000530784 ZSWIM3Q96MP5 696 aa10.09□□□□□ -0.79
CSDE1-213ENST00000530784 CCDC66A2RUB6 948 aa10.08□□□□□ -0.8
CSDE1-213ENST00000530784 AMY2AP04746 511 aa10.08□□□□□ -0.8
CSDE1-213ENST00000530784 AMY2BP19961 511 aa10.08□□□□□ -0.8
CSDE1-213ENST00000530784 RPL13P26373 211 aaKnown RBP10.08□□□□□ -0.8
CSDE1-213ENST00000530784 DNM2P50570 870 aa10.08□□□□□ -0.8
CSDE1-213ENST00000530784 PRR31Q5SQ13 230 aa10.08□□□□□ -0.8
CSDE1-213ENST00000530784 LCE4AQ5TA78 99 aa10.08□□□□□ -0.8
CSDE1-213ENST00000530784 BRAPQ7Z569 592 aa10.08□□□□□ -0.8
CSDE1-213ENST00000530784 FGD2Q7Z6J4 655 aa10.08□□□□□ -0.8
CSDE1-213ENST00000530784 C20orf173Q96LM9 149 aa10.08□□□□□ -0.8
CSDE1-213ENST00000530784 DHX29Q7Z478 1369 aaKnown RBP10.08□□□□□ -0.8
CSDE1-213ENST00000530784 TCOF1Q13428 1488 aaKnown RBP10.08□□□□□ -0.8
CSDE1-213ENST00000530784 KDM5DQ9BY66 1539 aa10.07□□□□□ -0.8
CSDE1-213ENST00000530784 FAM135AQ9P2D6 1515 aa10.07□□□□□ -0.8
CSDE1-213ENST00000530784 A2ML1A8K2U0 1454 aa10.07□□□□□ -0.8
CSDE1-213ENST00000530784 DISP3Q9P2K9 1392 aa10.07□□□□□ -0.8
CSDE1-213ENST00000530784 KRTAP4-8A0A0G2JLE6 195 aa10.07□□□□□ -0.8
CSDE1-213ENST00000530784 KCNQ2O43526 872 aa10.07□□□□□ -0.8
CSDE1-213ENST00000530784 KRT15P19012 456 aa10.07□□□□□ -0.8
CSDE1-213ENST00000530784 JAM2P57087 298 aa10.07□□□□□ -0.8
CSDE1-213ENST00000530784 RTP5Q14D33 572 aa10.07□□□□□ -0.8
CSDE1-213ENST00000530784 FAM47CQ5HY64 1035 aa10.07□□□□□ -0.8
CSDE1-213ENST00000530784 PTRH1Q86Y79 214 aaKnown RBP10.07□□□□□ -0.8
CSDE1-213ENST00000530784 TRIM39Q9HCM9 518 aa10.07□□□□□ -0.8
CSDE1-213ENST00000530784 SRPK3Q9UPE1 567 aa10.07□□□□□ -0.8
CSDE1-213ENST00000530784 ZNF335Q9H4Z2 1342 aaPredicted RBP10.07□□□□□ -0.8
CSDE1-213ENST00000530784 ACOT7O00154 380 aa10.06□□□□□ -0.8
CSDE1-213ENST00000530784 CKMP06732 381 aa10.06□□□□□ -0.8
CSDE1-213ENST00000530784 CRY1Q16526 586 aa10.06□□□□□ -0.8
CSDE1-213ENST00000530784 CLIC6Q96NY7 704 aa10.06□□□□□ -0.8
CSDE1-213ENST00000530784 TMEM209Q96SK2 561 aa10.06□□□□□ -0.8
CSDE1-213ENST00000530784 RAPGEFL1Q9UHV5 662 aa10.06□□□□□ -0.8
CSDE1-213ENST00000530784 COQ6Q9Y2Z9 468 aa10.06□□□□□ -0.8
CSDE1-213ENST00000530784 PZPP20742 1482 aa10.05□□□□□ -0.8
CSDE1-213ENST00000530784 A0A0G2JLL6 359 aaPredicted RBP10.05□□□□□ -0.8
CSDE1-213ENST00000530784 MAN2B1O00754 1011 aa10.05□□□□□ -0.8
CSDE1-213ENST00000530784 PLD2O14939 933 aa10.05□□□□□ -0.8
CSDE1-213ENST00000530784 KIF3BO15066 747 aa10.05□□□□□ -0.8
CSDE1-213ENST00000530784 GSTA4O15217 222 aa10.05□□□□□ -0.8
CSDE1-213ENST00000530784 NT5DC1Q5TFE4 455 aa10.05□□□□□ -0.8
CSDE1-213ENST00000530784 ZNF761Q86XN6 746 aaPredicted RBP10.05□□□□□ -0.8
CSDE1-213ENST00000530784 ADAMTS17Q8TE56 1095 aa10.05□□□□□ -0.8
CSDE1-213ENST00000530784 CLUHP3Q96NS8 147 aa10.05□□□□□ -0.8
CSDE1-213ENST00000530784 ARHGEF5Q12774 1597 aa10.05□□□□□ -0.8
CSDE1-213ENST00000530784 SPATA31D1Q6ZQQ2 1576 aa10.05□□□□□ -0.8
CSDE1-213ENST00000530784 DNMT1P26358 1616 aaKnown RBP10.04□□□□□ -0.8
CSDE1-213ENST00000530784 TNRQ92752 1358 aa10.04□□□□□ -0.8
CSDE1-213ENST00000530784 TCRBV16S1A1N1A0A5B0 115 aa10.04□□□□□ -0.8
CSDE1-213ENST00000530784 FAM90A27PA6NNH2 459 aa10.04□□□□□ -0.8
CSDE1-213ENST00000530784 ZNF561-AS1K7EIQ3 104 aa10.04□□□□□ -0.8
CSDE1-213ENST00000530784 DDX3XO00571 662 aaKnown RBP eCLIP10.04□□□□□ -0.8
CSDE1-213ENST00000530784 KCNK3O14649 394 aa10.04□□□□□ -0.8
CSDE1-213ENST00000530784 PHF19Q5T6S3 580 aa10.04□□□□□ -0.8
CSDE1-213ENST00000530784 BTBD8Q5XKL5 378 aa10.04□□□□□ -0.8
CSDE1-213ENST00000530784 VASNQ6EMK4 673 aa10.04□□□□□ -0.8
CSDE1-213ENST00000530784 NLGN4XQ8N0W4 816 aa10.04□□□□□ -0.8
CSDE1-213ENST00000530784 CISD2Q8N5K1 135 aaKnown RBP10.04□□□□□ -0.8
CSDE1-213ENST00000530784 SMURF1Q9HCE7 757 aa10.04□□□□□ -0.8
CSDE1-213ENST00000530784 CROTQ9UKG9 612 aa10.04□□□□□ -0.8
CSDE1-213ENST00000530784 VPS8Q8N3P4 1428 aa10.04□□□□□ -0.8
CSDE1-213ENST00000530784 WASHC2CQ9Y4E1 1318 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms