RNA–Protein interactions for RNA: ENST00000529928.1

COL16A1-216, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-216ENST00000529928 TRPC6Q9Y210 931 aa18.42■□□□□ 0.54
COL16A1-216ENST00000529928 FSD2A1L4K1 749 aa18.41■□□□□ 0.54
COL16A1-216ENST00000529928 GSPT1P15170 499 aaKnown RBP18.41■□□□□ 0.54
COL16A1-216ENST00000529928 TMEM62Q0P6H9 643 aa18.41■□□□□ 0.54
COL16A1-216ENST00000529928 CBX2Q14781 532 aaPredicted RBP18.41■□□□□ 0.54
COL16A1-216ENST00000529928 TTC22Q5TAA0 569 aa18.41■□□□□ 0.54
COL16A1-216ENST00000529928 RBM23Q86U06 439 aaKnown RBP18.41■□□□□ 0.54
COL16A1-216ENST00000529928 MB21D2Q8IYB1 491 aaPredicted RBP18.41■□□□□ 0.54
COL16A1-216ENST00000529928 PRSS33Q8NF86 280 aa18.41■□□□□ 0.54
COL16A1-216ENST00000529928 ZBTB10Q96DT7 871 aa18.41■□□□□ 0.54
COL16A1-216ENST00000529928 CELF4Q9BZC1 486 aaKnown RBP18.41■□□□□ 0.54
COL16A1-216ENST00000529928 LY9Q9HBG7 655 aa18.41■□□□□ 0.54
COL16A1-216ENST00000529928 SLC9A2Q9UBY0 812 aa18.41■□□□□ 0.54
COL16A1-216ENST00000529928 BARX2Q9UMQ3 279 aaPredicted RBP18.41■□□□□ 0.54
COL16A1-216ENST00000529928 USP15Q9Y4E8 981 aaPredicted RBP18.41■□□□□ 0.54
COL16A1-216ENST00000529928 PCDHA2Q9Y5H9 948 aa18.41■□□□□ 0.54
COL16A1-216ENST00000529928 GLP2RO95838 553 aa18.4■□□□□ 0.54
COL16A1-216ENST00000529928 ZXDAP98168 799 aa18.4■□□□□ 0.54
COL16A1-216ENST00000529928 UBE3AQ05086 875 aa18.4■□□□□ 0.54
COL16A1-216ENST00000529928 NME8Q8N427 588 aa18.4■□□□□ 0.54
COL16A1-216ENST00000529928 PCYT2Q99447 389 aa18.4■□□□□ 0.54
COL16A1-216ENST00000529928 MTA3Q9BTC8 594 aa18.4■□□□□ 0.54
COL16A1-216ENST00000529928 PHF7Q9BWX1 381 aaPredicted RBP18.4■□□□□ 0.54
COL16A1-216ENST00000529928 TLE6Q9H808 572 aa18.4■□□□□ 0.54
COL16A1-216ENST00000529928 RNF216Q9NWF9 866 aaPredicted RBP18.4■□□□□ 0.54
COL16A1-216ENST00000529928 PCDHB12Q9Y5F1 795 aa18.4■□□□□ 0.54
COL16A1-216ENST00000529928 KDM3AQ9Y4C1 1321 aa18.4■□□□□ 0.54
COL16A1-216ENST00000529928 SMIM35A0A1B0GVV1 85 aa18.39■□□□□ 0.53
COL16A1-216ENST00000529928 PLEKHA8P1O95397 391 aa18.39■□□□□ 0.53
COL16A1-216ENST00000529928 CHMLP26374 656 aa18.39■□□□□ 0.53
COL16A1-216ENST00000529928 UBE2SQ16763 222 aa18.39■□□□□ 0.53
COL16A1-216ENST00000529928 CASC1Q6TDU7 716 aa18.39■□□□□ 0.53
COL16A1-216ENST00000529928 TMTC2Q8N394 836 aa18.39■□□□□ 0.53
COL16A1-216ENST00000529928 FBXL6Q8N531 539 aa18.39■□□□□ 0.53
COL16A1-216ENST00000529928 SRBD1Q8N5C6 995 aaKnown RBP18.39■□□□□ 0.53
COL16A1-216ENST00000529928 MICAL1Q8TDZ2 1067 aa18.39■□□□□ 0.53
COL16A1-216ENST00000529928 AAASQ9NRG9 546 aa18.39■□□□□ 0.53
COL16A1-216ENST00000529928 PCDHA6Q9UN73 950 aa18.39■□□□□ 0.53
COL16A1-216ENST00000529928 PCDHB7Q9Y5E2 793 aa18.39■□□□□ 0.53
COL16A1-216ENST00000529928 PCDHA8Q9Y5H6 950 aa18.39■□□□□ 0.53
COL16A1-216ENST00000529928 PPFIA3O75145 1194 aa18.38■□□□□ 0.53
COL16A1-216ENST00000529928 ATF7P17544 494 aaPredicted RBP18.38■□□□□ 0.53
COL16A1-216ENST00000529928 SARSP49591 514 aaKnown RBP18.38■□□□□ 0.53
COL16A1-216ENST00000529928 GATMP50440 423 aa18.38■□□□□ 0.53
COL16A1-216ENST00000529928 KRT76Q01546 638 aa18.38■□□□□ 0.53
COL16A1-216ENST00000529928 PLCB4Q15147 1175 aa18.38■□□□□ 0.53
COL16A1-216ENST00000529928 IER5LQ5T953 404 aa18.38■□□□□ 0.53
COL16A1-216ENST00000529928 NFXL1Q6ZNB6 911 aa18.38■□□□□ 0.53
COL16A1-216ENST00000529928 PLPPR4Q7Z2D5 763 aa18.38■□□□□ 0.53
COL16A1-216ENST00000529928 TRAPPC12Q8WVT3 735 aa18.38■□□□□ 0.53
COL16A1-216ENST00000529928 PHOX2BQ99453 314 aa18.38■□□□□ 0.53
COL16A1-216ENST00000529928 SDF4Q9BRK5 362 aa18.38■□□□□ 0.53
COL16A1-216ENST00000529928 KCNH7Q9NS40 1196 aa18.38■□□□□ 0.53
COL16A1-216ENST00000529928 TRIOO75962 3097 aa18.38■□□□□ 0.53
COL16A1-216ENST00000529928 CCDC69A6NI79 296 aa18.37■□□□□ 0.53
COL16A1-216ENST00000529928 SGSM2O43147 1006 aa18.37■□□□□ 0.53
COL16A1-216ENST00000529928 CALM1P0DP23 149 aa18.37■□□□□ 0.53
COL16A1-216ENST00000529928 CALM2P0DP24 149 aa18.37■□□□□ 0.53
COL16A1-216ENST00000529928 CALM3P0DP25 149 aa18.37■□□□□ 0.53
COL16A1-216ENST00000529928 SLC26A2P50443 739 aa18.37■□□□□ 0.53
COL16A1-216ENST00000529928 STAT5BP51692 787 aa18.37■□□□□ 0.53
COL16A1-216ENST00000529928 ACTR2P61160 394 aa18.37■□□□□ 0.53
COL16A1-216ENST00000529928 SIGLEC14Q08ET2 396 aa18.37■□□□□ 0.53
COL16A1-216ENST00000529928 NFX1Q12986 1120 aaKnown RBP18.37■□□□□ 0.53
COL16A1-216ENST00000529928 SPOUT1Q5T280 376 aaKnown RBP18.37■□□□□ 0.53
COL16A1-216ENST00000529928 PDE12Q6L8Q7 609 aaKnown RBP18.37■□□□□ 0.53
COL16A1-216ENST00000529928 CMTR1Q8N1G2 835 aaKnown RBP18.37■□□□□ 0.53
COL16A1-216ENST00000529928 MAP4K1Q92918 833 aa18.37■□□□□ 0.53
COL16A1-216ENST00000529928 RPGRIP1Q96KN7 1286 aa18.37■□□□□ 0.53
COL16A1-216ENST00000529928 CDCA3Q99618 268 aaPredicted RBP18.37■□□□□ 0.53
COL16A1-216ENST00000529928 MXRA8Q9BRK3 442 aa18.37■□□□□ 0.53
COL16A1-216ENST00000529928 TMX1Q9H3N1 280 aa18.37■□□□□ 0.53
COL16A1-216ENST00000529928 TLR9Q9NR96 1032 aa18.37■□□□□ 0.53
COL16A1-216ENST00000529928 PCDHGC5Q9Y5F6 944 aa18.37■□□□□ 0.53
COL16A1-216ENST00000529928 NFASCO94856 1347 aa18.37■□□□□ 0.53
COL16A1-216ENST00000529928 PLXNA4Q9HCM2 1894 aa18.37■□□□□ 0.53
COL16A1-216ENST00000529928 PRC1O43663 620 aa18.36■□□□□ 0.53
COL16A1-216ENST00000529928 ST18O60284 1047 aa18.36■□□□□ 0.53
COL16A1-216ENST00000529928 TMEM266Q2M3C6 531 aa18.36■□□□□ 0.53
COL16A1-216ENST00000529928 ODR4Q5SWX8 454 aa18.36■□□□□ 0.53
COL16A1-216ENST00000529928 MTHFD1LQ6UB35 978 aa18.36■□□□□ 0.53
COL16A1-216ENST00000529928 ATP8B4Q8TF62 1192 aa18.36■□□□□ 0.53
COL16A1-216ENST00000529928 SUSD6Q92537 303 aa18.36■□□□□ 0.53
COL16A1-216ENST00000529928 TMEM87BQ96K49 555 aa18.36■□□□□ 0.53
COL16A1-216ENST00000529928 NEK1Q96PY6 1258 aa18.36■□□□□ 0.53
COL16A1-216ENST00000529928 C1orf112Q9NSG2 853 aa18.36■□□□□ 0.53
COL16A1-216ENST00000529928 LOXHD1Q8IVV2 1947 aa18.35■□□□□ 0.53
COL16A1-216ENST00000529928 DENND3A2RUS2 1198 aa18.35■□□□□ 0.53
COL16A1-216ENST00000529928 PER2O15055 1255 aa18.35■□□□□ 0.53
COL16A1-216ENST00000529928 RPS6KA5O75582 802 aa18.35■□□□□ 0.53
COL16A1-216ENST00000529928 FGF18O76093 207 aa18.35■□□□□ 0.53
COL16A1-216ENST00000529928 SRGAP2BP0DMP2 458 aa18.35■□□□□ 0.53
COL16A1-216ENST00000529928 IBSPP21815 317 aaPredicted RBP18.35■□□□□ 0.53
COL16A1-216ENST00000529928 PDE4AP27815 886 aa18.35■□□□□ 0.53
COL16A1-216ENST00000529928 MCM5P33992 734 aa18.35■□□□□ 0.53
COL16A1-216ENST00000529928 TCF15Q12870 199 aa18.35■□□□□ 0.53
COL16A1-216ENST00000529928 SLC24A5Q71RS6 500 aa18.35■□□□□ 0.53
COL16A1-216ENST00000529928 HEATR3Q7Z4Q2 680 aa18.35■□□□□ 0.53
COL16A1-216ENST00000529928 ERVK-5Q9HDB9 667 aa18.35■□□□□ 0.53
COL16A1-216ENST00000529928 RBM8AQ9Y5S9 174 aaKnown RBP18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms