RNA–Protein interactions for RNA: ENST00000529898.1

CTR9-205, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-205ENST00000529898 LACTBP83111 547 aaPredicted RBP4.97□□□□□ -1.61
CTR9-205ENST00000529898 DBPQ10586 325 aaPredicted RBP4.97□□□□□ -1.61
CTR9-205ENST00000529898 SLFN13Q68D06 897 aa4.97□□□□□ -1.61
CTR9-205ENST00000529898 CASC1Q6TDU7 716 aa4.97□□□□□ -1.61
CTR9-205ENST00000529898 LIMS2Q7Z4I7 341 aa4.97□□□□□ -1.61
CTR9-205ENST00000529898 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.97□□□□□ -1.61
CTR9-205ENST00000529898 REXO1L1PQ8IX06 675 aa4.97□□□□□ -1.61
CTR9-205ENST00000529898 FBXW5Q969U6 566 aa4.97□□□□□ -1.61
CTR9-205ENST00000529898 GTPBP4Q9BZE4 634 aaKnown RBP4.97□□□□□ -1.61
CTR9-205ENST00000529898 SEC61A2Q9H9S3 476 aa4.97□□□□□ -1.61
CTR9-205ENST00000529898 GEMIN8Q9NWZ8 242 aaKnown RBP4.97□□□□□ -1.61
CTR9-205ENST00000529898 ARHGAP20Q9P2F6 1191 aa4.97□□□□□ -1.61
CTR9-205ENST00000529898 ZFP69BQ9UJL9 534 aa4.97□□□□□ -1.61
CTR9-205ENST00000529898 SRPK3Q9UPE1 567 aa4.97□□□□□ -1.61
CTR9-205ENST00000529898 SYNJ1O43426 1573 aa4.96□□□□□ -1.62
CTR9-205ENST00000529898 TNIKQ9UKE5 1360 aa4.96□□□□□ -1.62
CTR9-205ENST00000529898 FAM90A27PA6NNH2 459 aa4.96□□□□□ -1.62
CTR9-205ENST00000529898 KCNQ2O43526 872 aa4.96□□□□□ -1.62
CTR9-205ENST00000529898 INSRRP14616 1297 aa4.96□□□□□ -1.62
CTR9-205ENST00000529898 RALBP1Q15311 655 aa4.96□□□□□ -1.62
CTR9-205ENST00000529898 ARHGAP36Q6ZRI8 547 aa4.96□□□□□ -1.62
CTR9-205ENST00000529898 GSTCDQ8NEC7 633 aa4.96□□□□□ -1.62
CTR9-205ENST00000529898 DVL3Q92997 716 aaPredicted RBP4.96□□□□□ -1.62
CTR9-205ENST00000529898 LOXL4Q96JB6 756 aa4.96□□□□□ -1.62
CTR9-205ENST00000529898 ZNF830Q96NB3 372 aaPredicted RBP4.96□□□□□ -1.62
CTR9-205ENST00000529898 C8orf49Q96NF6 230 aa4.96□□□□□ -1.62
CTR9-205ENST00000529898 CDC6Q99741 560 aa4.96□□□□□ -1.62
CTR9-205ENST00000529898 PRDM16Q9HAZ2 1276 aa4.96□□□□□ -1.62
CTR9-205ENST00000529898 PFDN2Q9UHV9 154 aa4.96□□□□□ -1.62
CTR9-205ENST00000529898 SLC4A7Q9Y6M7 1214 aa4.96□□□□□ -1.62
CTR9-205ENST00000529898 RUSC2Q8N2Y8 1516 aa4.96□□□□□ -1.62
CTR9-205ENST00000529898 SOGA1O94964 1423 aa4.96□□□□□ -1.62
CTR9-205ENST00000529898 ZNF536O15090 1300 aa4.96□□□□□ -1.62
CTR9-205ENST00000529898 PEG3Q9GZU2 1588 aa4.95□□□□□ -1.62
CTR9-205ENST00000529898 PATE3B3GLJ2 98 aa4.95□□□□□ -1.62
CTR9-205ENST00000529898 ZNF561-AS1K7EIQ3 104 aa4.95□□□□□ -1.62
CTR9-205ENST00000529898 MAN2B1O00754 1011 aa4.95□□□□□ -1.62
CTR9-205ENST00000529898 B4GALT4O60513 344 aa4.95□□□□□ -1.62
CTR9-205ENST00000529898 FBXO21O94952 628 aa4.95□□□□□ -1.62
CTR9-205ENST00000529898 CNOT4O95628 575 aaKnown RBP4.95□□□□□ -1.62
CTR9-205ENST00000529898 PTPN1P18031 435 aaKnown RBP4.95□□□□□ -1.62
CTR9-205ENST00000529898 TNFRSF1AP19438 455 aa4.95□□□□□ -1.62
CTR9-205ENST00000529898 CSF2RBP32927 897 aa4.95□□□□□ -1.62
CTR9-205ENST00000529898 GJA4P35212 333 aa4.95□□□□□ -1.62
CTR9-205ENST00000529898 DMTNQ08495 405 aa4.95□□□□□ -1.62
CTR9-205ENST00000529898 CDSNQ15517 529 aa4.95□□□□□ -1.62
CTR9-205ENST00000529898 HSP90AB4PQ58FF6 505 aa4.95□□□□□ -1.62
CTR9-205ENST00000529898 HSP90AB3PQ58FF7 597 aa4.95□□□□□ -1.62
CTR9-205ENST00000529898 TRIM61Q5EBN2 209 aa4.95□□□□□ -1.62
CTR9-205ENST00000529898 FIGNQ5HY92 759 aa4.95□□□□□ -1.62
CTR9-205ENST00000529898 BTBD8Q5XKL5 378 aa4.95□□□□□ -1.62
CTR9-205ENST00000529898 ARHGEF18Q6ZSZ5 1173 aa4.95□□□□□ -1.62
CTR9-205ENST00000529898 FAM43BQ6ZT52 329 aaPredicted RBP4.95□□□□□ -1.62
CTR9-205ENST00000529898 STPG3Q8N7X2 389 aa4.95□□□□□ -1.62
CTR9-205ENST00000529898 CD244Q9BZW8 370 aa4.95□□□□□ -1.62
CTR9-205ENST00000529898 TSPYL1Q9H0U9 437 aa4.95□□□□□ -1.62
CTR9-205ENST00000529898 MEGF9Q9H1U4 602 aa4.95□□□□□ -1.62
CTR9-205ENST00000529898 CBLCQ9ULV8 474 aa4.95□□□□□ -1.62
CTR9-205ENST00000529898 MRPS23Q9Y3D9 190 aaKnown RBP4.95□□□□□ -1.62
CTR9-205ENST00000529898 PCDHA8Q9Y5H6 950 aa4.95□□□□□ -1.62
CTR9-205ENST00000529898 EEA1Q15075 1411 aa4.95□□□□□ -1.62
CTR9-205ENST00000529898 CCDC163A0A0D9SF12 145 aa4.94□□□□□ -1.62
CTR9-205ENST00000529898 FAM221BA6H8Z2 402 aa4.94□□□□□ -1.62
CTR9-205ENST00000529898 NPEPPSL1A6NEC2 478 aa4.94□□□□□ -1.62
CTR9-205ENST00000529898 H0Y858 1186 aa4.94□□□□□ -1.62
CTR9-205ENST00000529898 GSTA4O15217 222 aa4.94□□□□□ -1.62
CTR9-205ENST00000529898 CLASP2O75122 1294 aaKnown RBP4.94□□□□□ -1.62
CTR9-205ENST00000529898 PDE6AP16499 860 aa4.94□□□□□ -1.62
CTR9-205ENST00000529898 HERVK_113P62684 666 aa4.94□□□□□ -1.62
CTR9-205ENST00000529898 GUCY1A3Q02108 690 aa4.94□□□□□ -1.62
CTR9-205ENST00000529898 ICAM4Q14773 271 aa4.94□□□□□ -1.62
CTR9-205ENST00000529898 PHF19Q5T6S3 580 aa4.94□□□□□ -1.62
CTR9-205ENST00000529898 L1TD1Q5T7N2 865 aaKnown RBP4.94□□□□□ -1.62
CTR9-205ENST00000529898 SOGA3Q5TF21 947 aa4.94□□□□□ -1.62
CTR9-205ENST00000529898 TMED8Q6PL24 325 aaPredicted RBP4.94□□□□□ -1.62
CTR9-205ENST00000529898 MTDHQ86UE4 582 aaKnown RBP4.94□□□□□ -1.62
CTR9-205ENST00000529898 OSTM1Q86WC4 334 aa4.94□□□□□ -1.62
CTR9-205ENST00000529898 WWC2-AS2Q96NR7 200 aa4.94□□□□□ -1.62
CTR9-205ENST00000529898 DEPDC7Q96QD5 511 aa4.94□□□□□ -1.62
CTR9-205ENST00000529898 SMURF1Q9HCE7 757 aa4.94□□□□□ -1.62
CTR9-205ENST00000529898 ZDHHC9Q9Y397 364 aa4.94□□□□□ -1.62
CTR9-205ENST00000529898 TSC22D4Q9Y3Q8 395 aa4.94□□□□□ -1.62
CTR9-205ENST00000529898 KDM2BQ8NHM5 1336 aa4.94□□□□□ -1.62
CTR9-205ENST00000529898 GOLGA3Q08378 1498 aa4.94□□□□□ -1.62
CTR9-205ENST00000529898 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.93□□□□□ -1.62
CTR9-205ENST00000529898 PLEKHD1A6NEE1 506 aa4.93□□□□□ -1.62
CTR9-205ENST00000529898 MATN3O15232 486 aa4.93□□□□□ -1.62
CTR9-205ENST00000529898 CUTAO60888 179 aa4.93□□□□□ -1.62
CTR9-205ENST00000529898 EFCAB14O75071 495 aa4.93□□□□□ -1.62
CTR9-205ENST00000529898 C4BPAP04003 597 aaKnown RBP4.93□□□□□ -1.62
CTR9-205ENST00000529898 PYGMP11217 842 aa4.93□□□□□ -1.62
CTR9-205ENST00000529898 POLD1P28340 1107 aa4.93□□□□□ -1.62
CTR9-205ENST00000529898 GTF2F1P35269 517 aaKnown RBP eCLIP4.93□□□□□ -1.62
CTR9-205ENST00000529898 GLRBP48167 497 aa4.93□□□□□ -1.62
CTR9-205ENST00000529898 OS9Q13438 667 aaPredicted RBP4.93□□□□□ -1.62
CTR9-205ENST00000529898 TOP3AQ13472 1001 aaPredicted RBP4.93□□□□□ -1.62
CTR9-205ENST00000529898 PUM1Q14671 1186 aaKnown RBP eCLIP4.93□□□□□ -1.62
CTR9-205ENST00000529898 STILQ15468 1287 aa4.93□□□□□ -1.62
CTR9-205ENST00000529898 CXXC5Q7LFL8 322 aaKnown RBP4.93□□□□□ -1.62
CTR9-205ENST00000529898 CIR1Q86X95 450 aaPredicted RBP4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 102.1 ms