RNA–Protein interactions for RNA: ENST00000529873.5

CTNND1-221, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-221ENST00000529873 PCDHA6Q9UN73 950 aa9.15□□□□□ -0.94
CTNND1-221ENST00000529873 PCDHA8Q9Y5H6 950 aa9.15□□□□□ -0.94
CTNND1-221ENST00000529873 COL15A1P39059 1388 aa9.15□□□□□ -0.94
CTNND1-221ENST00000529873 CDC42BPAQ5VT25 1732 aa9.15□□□□□ -0.94
CTNND1-221ENST00000529873 FTCDO95954 541 aa9.15□□□□□ -0.94
CTNND1-221ENST00000529873 HOXA13P31271 388 aaPredicted RBP9.15□□□□□ -0.94
CTNND1-221ENST00000529873 ARL13BQ3SXY8 428 aa9.15□□□□□ -0.94
CTNND1-221ENST00000529873 EP400NLQ6ZTU2 488 aa9.15□□□□□ -0.94
CTNND1-221ENST00000529873 CFAP61Q8NHU2 1237 aa9.15□□□□□ -0.94
CTNND1-221ENST00000529873 ZNF341Q9BYN7 854 aa9.15□□□□□ -0.94
CTNND1-221ENST00000529873 SAMSN1Q9NSI8 373 aaKnown RBP9.15□□□□□ -0.94
CTNND1-221ENST00000529873 CDHR2Q9BYE9 1310 aa9.15□□□□□ -0.94
CTNND1-221ENST00000529873 SASH1O94885 1247 aa9.15□□□□□ -0.95
CTNND1-221ENST00000529873 SEC31AO94979 1220 aaKnown RBP9.15□□□□□ -0.95
CTNND1-221ENST00000529873 LARGE1O95461 756 aa9.15□□□□□ -0.95
CTNND1-221ENST00000529873 MXI1P50539 228 aa9.15□□□□□ -0.95
CTNND1-221ENST00000529873 TTC19Q6DKK2 380 aaPredicted RBP9.15□□□□□ -0.95
CTNND1-221ENST00000529873 TMTC3Q6ZXV5 915 aa9.15□□□□□ -0.95
CTNND1-221ENST00000529873 ARMCX2Q7L311 632 aa9.15□□□□□ -0.95
CTNND1-221ENST00000529873 RSRC2Q7L4I2 434 aaKnown RBP9.15□□□□□ -0.95
CTNND1-221ENST00000529873 LCA5Q86VQ0 697 aa9.15□□□□□ -0.95
CTNND1-221ENST00000529873 TTLL11Q8NHH1 800 aa9.15□□□□□ -0.95
CTNND1-221ENST00000529873 RAD54LQ92698 747 aa9.15□□□□□ -0.95
CTNND1-221ENST00000529873 GCNAQ96QF7 691 aa9.15□□□□□ -0.95
CTNND1-221ENST00000529873 FTOQ9C0B1 505 aaKnown RBP eCLIP9.15□□□□□ -0.952e-18■□□□□ 11.2
CTNND1-221ENST00000529873 OVOS2A0A0G2JMS6 1433 aa9.15□□□□□ -0.95
CTNND1-221ENST00000529873 OVOS2A0A0J9YW53 1432 aa9.15□□□□□ -0.95
CTNND1-221ENST00000529873 PLS3P13797 630 aa9.15□□□□□ -0.95
CTNND1-221ENST00000529873 CASP2P42575 452 aa9.15□□□□□ -0.95
CTNND1-221ENST00000529873 DR1Q01658 176 aa9.15□□□□□ -0.95
CTNND1-221ENST00000529873 NECTIN1Q15223 517 aa9.15□□□□□ -0.95
CTNND1-221ENST00000529873 OVOS2Q6IE36 1432 aa9.15□□□□□ -0.95
CTNND1-221ENST00000529873 BCAS4Q8TDM0 211 aa9.15□□□□□ -0.95
CTNND1-221ENST00000529873 TUBB6Q9BUF5 446 aa9.15□□□□□ -0.95
CTNND1-221ENST00000529873 LRRC4Q9HBW1 653 aa9.15□□□□□ -0.95
CTNND1-221ENST00000529873 ADGRB3O60242 1522 aa9.14□□□□□ -0.95
CTNND1-221ENST00000529873 IQCB1Q15051 598 aa9.14□□□□□ -0.95
CTNND1-221ENST00000529873 SCARA5Q6ZMJ2 495 aa9.14□□□□□ -0.95
CTNND1-221ENST00000529873 FAM210AQ96ND0 272 aa9.14□□□□□ -0.95
CTNND1-221ENST00000529873 TACO1Q9BSH4 297 aaKnown RBP9.14□□□□□ -0.95
CTNND1-221ENST00000529873 TULP4Q9NRJ4 1543 aa9.14□□□□□ -0.95
CTNND1-221ENST00000529873 BASP1P80723 227 aaKnown RBP9.14□□□□□ -0.95
CTNND1-221ENST00000529873 Q3C1V9 767 aa9.14□□□□□ -0.95
CTNND1-221ENST00000529873 TRIM68Q6AZZ1 485 aa9.14□□□□□ -0.95
CTNND1-221ENST00000529873 EFCAB13Q8IY85 973 aa9.14□□□□□ -0.95
CTNND1-221ENST00000529873 GPR101Q96P66 508 aaPredicted RBP9.14□□□□□ -0.95
CTNND1-221ENST00000529873 PPP1R16BQ96T49 567 aa9.14□□□□□ -0.95
CTNND1-221ENST00000529873 NDST4Q9H3R1 872 aa9.14□□□□□ -0.95
CTNND1-221ENST00000529873 NXF1Q9UBU9 619 aaKnown RBP9.14□□□□□ -0.95
CTNND1-221ENST00000529873 PRKAG2Q9UGJ0 569 aa9.14□□□□□ -0.95
CTNND1-221ENST00000529873 ABCB11O95342 1321 aa9.14□□□□□ -0.95
CTNND1-221ENST00000529873 GPC4O75487 556 aa9.14□□□□□ -0.95
CTNND1-221ENST00000529873 CD58P19256 250 aa9.14□□□□□ -0.95
CTNND1-221ENST00000529873 MX2P20592 715 aa9.14□□□□□ -0.95
CTNND1-221ENST00000529873 ARPP19P56211 112 aa9.14□□□□□ -0.95
CTNND1-221ENST00000529873 ESRRGP62508 458 aa9.14□□□□□ -0.95
CTNND1-221ENST00000529873 PFKFB3Q16875 520 aaPredicted RBP9.14□□□□□ -0.95
CTNND1-221ENST00000529873 PDXDC2PQ6P474 469 aa9.14□□□□□ -0.95
CTNND1-221ENST00000529873 UNC13DQ70J99 1090 aa9.14□□□□□ -0.95
CTNND1-221ENST00000529873 HSPH1Q92598 858 aa9.14□□□□□ -0.95
CTNND1-221ENST00000529873 UBN1Q9NPG3 1134 aa9.14□□□□□ -0.95
CTNND1-221ENST00000529873 SUFUQ9UMX1 484 aa9.14□□□□□ -0.95
CTNND1-221ENST00000529873 USP17L5A8MUK1 530 aa9.14□□□□□ -0.95
CTNND1-221ENST00000529873 ZBTB5O15062 677 aa9.14□□□□□ -0.95
CTNND1-221ENST00000529873 ECE2O60344 883 aa9.14□□□□□ -0.95
CTNND1-221ENST00000529873 RPS6KA4O75676 772 aa9.14□□□□□ -0.95
CTNND1-221ENST00000529873 PSMD7P51665 324 aa9.14□□□□□ -0.95
CTNND1-221ENST00000529873 PLTPP55058 493 aa9.14□□□□□ -0.95
CTNND1-221ENST00000529873 ORC2Q13416 577 aaPredicted RBP9.14□□□□□ -0.95
CTNND1-221ENST00000529873 DGKHQ86XP1 1220 aa9.14□□□□□ -0.95
CTNND1-221ENST00000529873 DNAAF3Q8N9W5 541 aa9.14□□□□□ -0.95
CTNND1-221ENST00000529873 FAM149B1Q96BN6 582 aa9.14□□□□□ -0.95
CTNND1-221ENST00000529873 FAM167AQ96KS9 214 aa9.14□□□□□ -0.95
CTNND1-221ENST00000529873 GSTA4O15217 222 aa9.13□□□□□ -0.95
CTNND1-221ENST00000529873 NDUFA10O95299 355 aa9.13□□□□□ -0.95
CTNND1-221ENST00000529873 CIITAP33076 1130 aa9.13□□□□□ -0.95
CTNND1-221ENST00000529873 OSTNP61366 133 aa9.13□□□□□ -0.95
CTNND1-221ENST00000529873 TSTA3Q13630 321 aaPredicted RBP9.13□□□□□ -0.95
CTNND1-221ENST00000529873 TTLL6Q8N841 843 aa9.13□□□□□ -0.95
CTNND1-221ENST00000529873 CEP72Q9P209 647 aa9.13□□□□□ -0.95
CTNND1-221ENST00000529873 EPS15L1Q9UBC2 864 aa9.13□□□□□ -0.95
CTNND1-221ENST00000529873 ATP8A1Q9Y2Q0 1164 aa9.13□□□□□ -0.95
CTNND1-221ENST00000529873 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.13□□□□□ -0.95
CTNND1-221ENST00000529873 TNS3Q68CZ2 1445 aa9.13□□□□□ -0.95
CTNND1-221ENST00000529873 CPDO75976 1380 aa9.13□□□□□ -0.95
CTNND1-221ENST00000529873 F8W8V4 182 aa9.13□□□□□ -0.95
CTNND1-221ENST00000529873 APOEP02649 317 aa9.13□□□□□ -0.95
CTNND1-221ENST00000529873 HSPA8P11142 646 aaKnown RBP9.13□□□□□ -0.95
CTNND1-221ENST00000529873 MARK3P27448 753 aa9.13□□□□□ -0.95
CTNND1-221ENST00000529873 NBPF9Q3BBW0 867 aa9.13□□□□□ -0.95
CTNND1-221ENST00000529873 RC3H1Q5TC82 1133 aaKnown RBP9.13□□□□□ -0.95
CTNND1-221ENST00000529873 ALS2CLQ60I27 953 aa9.13□□□□□ -0.95
CTNND1-221ENST00000529873 KCTD16Q68DU8 428 aa9.13□□□□□ -0.95
CTNND1-221ENST00000529873 DSTYKQ6XUX3 929 aa9.13□□□□□ -0.95
CTNND1-221ENST00000529873 BZW1Q7L1Q6 419 aaKnown RBP9.13□□□□□ -0.95
CTNND1-221ENST00000529873 THEM5Q8N1Q8 247 aa9.13□□□□□ -0.95
CTNND1-221ENST00000529873 ARHGEF40Q8TER5 1519 aa9.13□□□□□ -0.95
CTNND1-221ENST00000529873 GOLGA8IPA6NC78 632 aa9.13□□□□□ -0.95
CTNND1-221ENST00000529873 GOLGA8JA6NMD2 632 aa9.13□□□□□ -0.95
CTNND1-221ENST00000529873 WDR64B1ANS9 1081 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms