RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 EML1O00423 815 aa14.28□□□□□ -0.12
CCDC90B-216ENST00000529856 NEMFO60524 1076 aa14.28□□□□□ -0.12
CCDC90B-216ENST00000529856 CAND2O75155 1236 aa14.28□□□□□ -0.12
CCDC90B-216ENST00000529856 FGBP02675 491 aa14.28□□□□□ -0.12
CCDC90B-216ENST00000529856 PFKMP08237 780 aa14.28□□□□□ -0.12
CCDC90B-216ENST00000529856 ATP2B1P20020 1258 aa14.28□□□□□ -0.12
CCDC90B-216ENST00000529856 FXR1P51114 621 aaKnown RBP eCLIP14.28□□□□□ -0.12
CCDC90B-216ENST00000529856 IGBP1P78318 339 aa14.28□□□□□ -0.12
CCDC90B-216ENST00000529856 CALCRLQ16602 461 aa14.28□□□□□ -0.12
CCDC90B-216ENST00000529856 ZNF484Q5JVG2 852 aa14.28□□□□□ -0.12
CCDC90B-216ENST00000529856 TAF2Q6P1X5 1199 aa14.28□□□□□ -0.12
CCDC90B-216ENST00000529856 POTEHQ6S545 545 aa14.28□□□□□ -0.12
CCDC90B-216ENST00000529856 RUFY4Q6ZNE9 571 aa14.28□□□□□ -0.12
CCDC90B-216ENST00000529856 DEFB128Q7Z7B8 93 aa14.28□□□□□ -0.12
CCDC90B-216ENST00000529856 RPAINQ86UA6 219 aa14.28□□□□□ -0.12
CCDC90B-216ENST00000529856 CKAP2LQ8IYA6 745 aa14.28□□□□□ -0.12
CCDC90B-216ENST00000529856 TRAPPC12Q8WVT3 735 aa14.28□□□□□ -0.12
CCDC90B-216ENST00000529856 BBXQ8WY36 941 aaPredicted RBP14.28□□□□□ -0.12
CCDC90B-216ENST00000529856 SNX21Q969T3 373 aa14.28□□□□□ -0.12
CCDC90B-216ENST00000529856 MTMR9Q96QG7 549 aa14.28□□□□□ -0.12
CCDC90B-216ENST00000529856 TUBE1Q9UJT0 475 aa14.28□□□□□ -0.12
CCDC90B-216ENST00000529856 IGSF9BQ9UPX0 1349 aa14.28□□□□□ -0.12
CCDC90B-216ENST00000529856 TANC1Q9C0D5 1861 aa14.27□□□□□ -0.12
CCDC90B-216ENST00000529856 COL1A2P08123 1366 aa14.27□□□□□ -0.12
CCDC90B-216ENST00000529856 RSPH10B2B2RC85 870 aa14.27□□□□□ -0.13
CCDC90B-216ENST00000529856 H3BQV1 296 aa14.27□□□□□ -0.13
CCDC90B-216ENST00000529856 K7ELQ4 463 aaPredicted RBP14.27□□□□□ -0.13
CCDC90B-216ENST00000529856 ZNF862O60290 1169 aa14.27□□□□□ -0.13
CCDC90B-216ENST00000529856 RSPH10BP0C881 870 aa14.27□□□□□ -0.13
CCDC90B-216ENST00000529856 TRAPPC10P48553 1259 aa14.27□□□□□ -0.13
CCDC90B-216ENST00000529856 UGCGQ16739 394 aa14.27□□□□□ -0.13
CCDC90B-216ENST00000529856 RASIP1Q5U651 963 aa14.27□□□□□ -0.13
CCDC90B-216ENST00000529856 LARP1BQ659C4 914 aaKnown RBP14.27□□□□□ -0.13
CCDC90B-216ENST00000529856 MTHFD1LQ6UB35 978 aa14.27□□□□□ -0.13
CCDC90B-216ENST00000529856 HERVK_113Q902F9 699 aa14.27□□□□□ -0.13
CCDC90B-216ENST00000529856 ZBTB10Q96DT7 871 aa14.27□□□□□ -0.13
CCDC90B-216ENST00000529856 FAM167AQ96KS9 214 aa14.27□□□□□ -0.13
CCDC90B-216ENST00000529856 RNPC3Q96LT9 517 aaKnown RBP14.27□□□□□ -0.13
CCDC90B-216ENST00000529856 NRBP2Q9NSY0 501 aa14.27□□□□□ -0.13
CCDC90B-216ENST00000529856 PCDHA2Q9Y5H9 948 aa14.27□□□□□ -0.13
CCDC90B-216ENST00000529856 ZBTB42B2RXF5 422 aa14.26□□□□□ -0.13
CCDC90B-216ENST00000529856 SOX1O00570 391 aaPredicted RBP14.26□□□□□ -0.13
CCDC90B-216ENST00000529856 NBNO60934 754 aa14.26□□□□□ -0.13
CCDC90B-216ENST00000529856 CXCL10P02778 98 aa14.26□□□□□ -0.13
CCDC90B-216ENST00000529856 KLRC1P26715 233 aa14.26□□□□□ -0.13
CCDC90B-216ENST00000529856 MCM7P33993 719 aa14.26□□□□□ -0.13
CCDC90B-216ENST00000529856 SPIRE1Q08AE8 756 aa14.26□□□□□ -0.13
CCDC90B-216ENST00000529856 ORC2Q13416 577 aaPredicted RBP14.26□□□□□ -0.13
CCDC90B-216ENST00000529856 MBTPS1Q14703 1052 aa14.26□□□□□ -0.13
CCDC90B-216ENST00000529856 EPHA7Q15375 998 aa14.26□□□□□ -0.13
CCDC90B-216ENST00000529856 ZNF174Q15697 407 aa14.26□□□□□ -0.13
CCDC90B-216ENST00000529856 FAM26DQ5JW98 314 aa14.26□□□□□ -0.13
CCDC90B-216ENST00000529856 TTC38Q5R3I4 469 aa14.26□□□□□ -0.13
CCDC90B-216ENST00000529856 MCTP1Q6DN14 999 aa14.26□□□□□ -0.13
CCDC90B-216ENST00000529856 OTOP2Q7RTS6 562 aa14.26□□□□□ -0.13
CCDC90B-216ENST00000529856 TRMT1LQ7Z2T5 733 aaKnown RBP14.26□□□□□ -0.13
CCDC90B-216ENST00000529856 RSPH3Q86UC2 560 aa14.26□□□□□ -0.13
CCDC90B-216ENST00000529856 DNAJB3Q8WWF6 145 aa14.26□□□□□ -0.13
CCDC90B-216ENST00000529856 INTS4Q96HW7 963 aaKnown RBP14.26□□□□□ -0.13
CCDC90B-216ENST00000529856 FTOQ9C0B1 505 aaKnown RBP eCLIP14.26□□□□□ -0.13
CCDC90B-216ENST00000529856 TMEM60Q9H2L4 133 aa14.26□□□□□ -0.13
CCDC90B-216ENST00000529856 NOL7Q9UMY1 257 aaKnown RBP14.26□□□□□ -0.13
CCDC90B-216ENST00000529856 PCDHA12Q9UN75 941 aa14.26□□□□□ -0.13
CCDC90B-216ENST00000529856 TET1Q8NFU7 2136 aa14.26□□□□□ -0.13
CCDC90B-216ENST00000529856 STBD1O95210 358 aa14.25□□□□□ -0.13
CCDC90B-216ENST00000529856 CHRNA1P02708 482 aa14.25□□□□□ -0.13
CCDC90B-216ENST00000529856 OATP04181 439 aa14.25□□□□□ -0.13
CCDC90B-216ENST00000529856 RPLP2P05387 115 aaKnown RBP14.25□□□□□ -0.13
CCDC90B-216ENST00000529856 TXKP42681 527 aa14.25□□□□□ -0.13
CCDC90B-216ENST00000529856 TOB1P50616 345 aaPredicted RBP14.25□□□□□ -0.13
CCDC90B-216ENST00000529856 PSMC5P62195 406 aa14.25□□□□□ -0.13
CCDC90B-216ENST00000529856 PRKCEQ02156 737 aa14.25□□□□□ -0.13
CCDC90B-216ENST00000529856 NIFKQ9BYG3 293 aaKnown RBP14.25□□□□□ -0.13
CCDC90B-216ENST00000529856 MTIF3Q9H2K0 278 aaKnown RBP14.25□□□□□ -0.13
CCDC90B-216ENST00000529856 TTC12Q9H892 705 aaPredicted RBP14.25□□□□□ -0.13
CCDC90B-216ENST00000529856 CEP131Q9UPN4 1083 aa14.25□□□□□ -0.13
CCDC90B-216ENST00000529856 SMIM35A0A1B0GVV1 85 aa14.24□□□□□ -0.13
CCDC90B-216ENST00000529856 C22orf31O95567 290 aa14.24□□□□□ -0.13
CCDC90B-216ENST00000529856 P4HBP07237 508 aaKnown RBP14.24□□□□□ -0.13
CCDC90B-216ENST00000529856 CTSHP09668 335 aa14.24□□□□□ -0.13
CCDC90B-216ENST00000529856 ACTN1P12814 892 aa14.24□□□□□ -0.13
CCDC90B-216ENST00000529856 QARSP47897 775 aaKnown RBP14.24□□□□□ -0.13
CCDC90B-216ENST00000529856 XKR3Q5GH77 459 aa14.24□□□□□ -0.13
CCDC90B-216ENST00000529856 NCAPH2Q6IBW4 605 aa14.24□□□□□ -0.13
CCDC90B-216ENST00000529856 NME8Q8N427 588 aa14.24□□□□□ -0.13
CCDC90B-216ENST00000529856 C4orf32Q8N8J7 132 aa14.24□□□□□ -0.13
CCDC90B-216ENST00000529856 BANK1Q8NDB2 785 aa14.24□□□□□ -0.13
CCDC90B-216ENST00000529856 LRCH3Q96II8 777 aa14.24□□□□□ -0.13
CCDC90B-216ENST00000529856 FAM49AQ9H0Q0 323 aaPredicted RBP14.24□□□□□ -0.13
CCDC90B-216ENST00000529856 CXXC1Q9P0U4 656 aaPredicted RBP14.24□□□□□ -0.13
CCDC90B-216ENST00000529856 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.23□□□□□ -0.13
CCDC90B-216ENST00000529856 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.23□□□□□ -0.13
CCDC90B-216ENST00000529856 MAGEB2O15479 319 aa14.23□□□□□ -0.13
CCDC90B-216ENST00000529856 DKC1O60832 514 aaKnown RBP eCLIP14.23□□□□□ -0.13
CCDC90B-216ENST00000529856 PDCP20941 246 aa14.23□□□□□ -0.13
CCDC90B-216ENST00000529856 MGAT3Q09327 533 aa14.23□□□□□ -0.13
CCDC90B-216ENST00000529856 NBR1Q14596 966 aa14.23□□□□□ -0.13
CCDC90B-216ENST00000529856 TARBP2Q15633 366 aaKnown RBP14.23□□□□□ -0.13
CCDC90B-216ENST00000529856 CNKSR3Q6P9H4 555 aa14.23□□□□□ -0.13
CCDC90B-216ENST00000529856 KIAA0319LQ8IZA0 1049 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms