RNA–Protein interactions for RNA: ENST00000529848.1

SVIP-203, Transcript of small VCP interacting protein, humanhuman

TSL 5

Gene SVIP, Length 263 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-203ENST00000529848 VASNQ6EMK4 673 aa5.29□□□□□ -1.56
SVIP-203ENST00000529848 TMEM132EQ6IEE7 984 aa5.29□□□□□ -1.56
SVIP-203ENST00000529848 TIGD7Q6NT04 549 aaPredicted RBP5.29□□□□□ -1.56
SVIP-203ENST00000529848 CD300LDQ6UXZ3 194 aa5.29□□□□□ -1.56
SVIP-203ENST00000529848 PHYKPLQ8IUZ5 450 aa5.29□□□□□ -1.56
SVIP-203ENST00000529848 CHMP4CQ96CF2 233 aa5.29□□□□□ -1.56
SVIP-203ENST00000529848 LIN37Q96GY3 246 aaPredicted RBP5.29□□□□□ -1.56
SVIP-203ENST00000529848 TUBGCP5Q96RT8 1024 aa5.29□□□□□ -1.56
SVIP-203ENST00000529848 DIRC2Q96SL1 478 aa5.29□□□□□ -1.56
SVIP-203ENST00000529848 EPB41L4BQ9H329 900 aa5.29□□□□□ -1.56
SVIP-203ENST00000529848 MS4A5Q9H3V2 200 aa5.29□□□□□ -1.56
SVIP-203ENST00000529848 NSUN3Q9H649 340 aaKnown RBP5.29□□□□□ -1.56
SVIP-203ENST00000529848 AASDHPPTQ9NRN7 309 aa5.29□□□□□ -1.56
SVIP-203ENST00000529848 TOPORSQ9NS56 1045 aaPredicted RBP5.29□□□□□ -1.56
SVIP-203ENST00000529848 THRAP3Q9Y2W1 955 aaKnown RBP5.29□□□□□ -1.56
SVIP-203ENST00000529848 SHTN1A0MZ66 631 aa5.28□□□□□ -1.56
SVIP-203ENST00000529848 PARNO95453 639 aaKnown RBP5.28□□□□□ -1.56
SVIP-203ENST00000529848 CFBP00751 764 aa5.28□□□□□ -1.56
SVIP-203ENST00000529848 ASGR2P07307 311 aa5.28□□□□□ -1.56
SVIP-203ENST00000529848 TMEM253P0C7T8 217 aa5.28□□□□□ -1.56
SVIP-203ENST00000529848 PFKLP17858 780 aa5.28□□□□□ -1.56
SVIP-203ENST00000529848 ITGB5P18084 799 aa5.28□□□□□ -1.56
SVIP-203ENST00000529848 CCND1P24385 295 aa5.28□□□□□ -1.56
SVIP-203ENST00000529848 IARSP41252 1262 aaKnown RBP5.28□□□□□ -1.56
SVIP-203ENST00000529848 TARBP2Q15633 366 aaKnown RBP5.28□□□□□ -1.56
SVIP-203ENST00000529848 CR1LQ2VPA4 569 aa5.28□□□□□ -1.56
SVIP-203ENST00000529848 TTC38Q5R3I4 469 aa5.28□□□□□ -1.56
SVIP-203ENST00000529848 ESPNLQ6ZVH7 1005 aa5.28□□□□□ -1.56
SVIP-203ENST00000529848 AMOTL1Q8IY63 956 aa5.28□□□□□ -1.56
SVIP-203ENST00000529848 FERMT2Q96AC1 680 aa5.28□□□□□ -1.56
SVIP-203ENST00000529848 ACAP3Q96P50 834 aa5.28□□□□□ -1.56
SVIP-203ENST00000529848 RNF38Q9H0F5 515 aa5.28□□□□□ -1.56
SVIP-203ENST00000529848 DCP1AQ9NPI6 582 aaPredicted RBP5.28□□□□□ -1.56
SVIP-203ENST00000529848 FAM53CQ9NYF3 392 aa5.28□□□□□ -1.56
SVIP-203ENST00000529848 HSPBP1Q9NZL4 362 aa5.28□□□□□ -1.56
SVIP-203ENST00000529848 FAN1Q9Y2M0 1017 aa5.28□□□□□ -1.56
SVIP-203ENST00000529848 EID1Q9Y6B2 187 aa5.28□□□□□ -1.56
SVIP-203ENST00000529848 TNKSO95271 1327 aa5.27□□□□□ -1.57
SVIP-203ENST00000529848 E2F8A0AVK6 867 aa5.27□□□□□ -1.57
SVIP-203ENST00000529848 LCHNA4D1U4 455 aa5.27□□□□□ -1.57
SVIP-203ENST00000529848 ZNF503-AS2A6NEH8 195 aa5.27□□□□□ -1.57
SVIP-203ENST00000529848 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.27□□□□□ -1.57
SVIP-203ENST00000529848 GOLGA6L22H0YM25 854 aa5.27□□□□□ -1.57
SVIP-203ENST00000529848 PEX10O60683 326 aa5.27□□□□□ -1.57
SVIP-203ENST00000529848 APOL3O95236 402 aa5.27□□□□□ -1.57
SVIP-203ENST00000529848 CYP2C8P10632 490 aa5.27□□□□□ -1.57
SVIP-203ENST00000529848 PTGS1P23219 599 aa5.27□□□□□ -1.57
SVIP-203ENST00000529848 MC4RP32245 332 aa5.27□□□□□ -1.57
SVIP-203ENST00000529848 MCL1Q07820 350 aa5.27□□□□□ -1.57
SVIP-203ENST00000529848 CACNB2Q08289 660 aaPredicted RBP5.27□□□□□ -1.57
SVIP-203ENST00000529848 PRAMEF9Q5VWM5 478 aa5.27□□□□□ -1.57
SVIP-203ENST00000529848 PGM2L1Q6PCE3 622 aa5.27□□□□□ -1.57
SVIP-203ENST00000529848 TMC5Q6UXY8 1006 aa5.27□□□□□ -1.57
SVIP-203ENST00000529848 TTLL7Q6ZT98 887 aa5.27□□□□□ -1.57
SVIP-203ENST00000529848 RTN4RL1Q86UN2 441 aaPredicted RBP5.27□□□□□ -1.57
SVIP-203ENST00000529848 PNMA8AQ86V59 439 aaPredicted RBP5.27□□□□□ -1.57
SVIP-203ENST00000529848 CILP2Q8IUL8 1156 aa5.27□□□□□ -1.57
SVIP-203ENST00000529848 CBARPQ8N350 705 aaPredicted RBP5.27□□□□□ -1.57
SVIP-203ENST00000529848 WDR48Q8TAF3 677 aa5.27□□□□□ -1.57
SVIP-203ENST00000529848 CALML6Q8TD86 181 aa5.27□□□□□ -1.57
SVIP-203ENST00000529848 CPA5Q8WXQ8 436 aa5.27□□□□□ -1.57
SVIP-203ENST00000529848 FUBP3Q96I24 572 aaKnown RBP eCLIP5.27□□□□□ -1.57
SVIP-203ENST00000529848 SLC39A2Q9NP94 309 aa5.27□□□□□ -1.57
SVIP-203ENST00000529848 UCKL1Q9NWZ5 548 aa5.27□□□□□ -1.57
SVIP-203ENST00000529848 BTBD7Q9P203 1132 aa5.27□□□□□ -1.57
SVIP-203ENST00000529848 CHPF2Q9P2E5 772 aa5.27□□□□□ -1.57
SVIP-203ENST00000529848 PLA2G2DQ9UNK4 145 aa5.27□□□□□ -1.57
SVIP-203ENST00000529848 ST20-MTHFSA0A0A6YYL1 179 aa5.26□□□□□ -1.57
SVIP-203ENST00000529848 ZNF839A8K0R7 811 aa5.26□□□□□ -1.57
SVIP-203ENST00000529848 PRLP01236 227 aa5.26□□□□□ -1.57
SVIP-203ENST00000529848 PFKPQ01813 784 aa5.26□□□□□ -1.57
SVIP-203ENST00000529848 SLC6A3Q01959 620 aa5.26□□□□□ -1.57
SVIP-203ENST00000529848 ALDH6A1Q02252 535 aaKnown RBP5.26□□□□□ -1.57
SVIP-203ENST00000529848 ROM1Q03395 351 aa5.26□□□□□ -1.57
SVIP-203ENST00000529848 PPP2R5AQ15172 486 aa5.26□□□□□ -1.57
SVIP-203ENST00000529848 CLUL1Q15846 466 aa5.26□□□□□ -1.57
SVIP-203ENST00000529848 HSP90AB2PQ58FF8 381 aa5.26□□□□□ -1.57
SVIP-203ENST00000529848 PRR23BQ6ZRT6 265 aa5.26□□□□□ -1.57
SVIP-203ENST00000529848 LDHDQ86WU2 507 aa5.26□□□□□ -1.57
SVIP-203ENST00000529848 CXorf67Q86X51 503 aaPredicted RBP5.26□□□□□ -1.57
SVIP-203ENST00000529848 FMNL3Q8IVF7 1028 aa5.26□□□□□ -1.57
SVIP-203ENST00000529848 RAVER1Q8IY67 606 aaKnown RBP5.26□□□□□ -1.57
SVIP-203ENST00000529848 FAM26EQ8N5C1 309 aa5.26□□□□□ -1.57
SVIP-203ENST00000529848 C1orf162Q8NEQ5 155 aaPredicted RBP5.26□□□□□ -1.57
SVIP-203ENST00000529848 LMBR1Q8WVP7 490 aa5.26□□□□□ -1.57
SVIP-203ENST00000529848 FOXRED1Q96CU9 486 aaPredicted RBP5.26□□□□□ -1.57
SVIP-203ENST00000529848 HOOK2Q96ED9 719 aa5.26□□□□□ -1.57
SVIP-203ENST00000529848 ZNF496Q96IT1 587 aaPredicted RBP5.26□□□□□ -1.57
SVIP-203ENST00000529848 MAML3Q96JK9 1138 aa5.26□□□□□ -1.57
SVIP-203ENST00000529848 FOXB1Q99853 325 aa5.26□□□□□ -1.57
SVIP-203ENST00000529848 PCDH18Q9HCL0 1135 aa5.26□□□□□ -1.57
SVIP-203ENST00000529848 INCENPQ9NQS7 918 aa5.26□□□□□ -1.57
SVIP-203ENST00000529848 MKS1Q9NXB0 559 aa5.26□□□□□ -1.57
SVIP-203ENST00000529848 MRFAP1Q9Y605 127 aa5.26□□□□□ -1.57
SVIP-203ENST00000529848 LRRC10BA6NIK2 292 aa5.25□□□□□ -1.57
SVIP-203ENST00000529848 PRPF6O94906 941 aaKnown RBP5.25□□□□□ -1.57
SVIP-203ENST00000529848 SNUPNO95149 360 aaKnown RBP5.25□□□□□ -1.57
SVIP-203ENST00000529848 C8BP07358 591 aa5.25□□□□□ -1.57
SVIP-203ENST00000529848 FBLN1P23142 703 aa5.25□□□□□ -1.57
SVIP-203ENST00000529848 MC3RP41968 323 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms