RNA–Protein interactions for RNA: ENST00000529745.5

CCDC90B-215, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-215ENST00000529745 PBX2P40425 430 aa17.5■□□□□ 0.39
CCDC90B-215ENST00000529745 WDR5P61964 334 aaKnown RBP17.5■□□□□ 0.39
CCDC90B-215ENST00000529745 MGAT3Q09327 533 aa17.5■□□□□ 0.39
CCDC90B-215ENST00000529745 PPP4R3AQ6IN85 833 aa17.5■□□□□ 0.39
CCDC90B-215ENST00000529745 B3GNT9Q6UX72 402 aa17.5■□□□□ 0.39
CCDC90B-215ENST00000529745 ATP8B4Q8TF62 1192 aa17.5■□□□□ 0.39
CCDC90B-215ENST00000529745 ZNF576Q9H609 170 aa17.5■□□□□ 0.39
CCDC90B-215ENST00000529745 ZNF302Q9NR11 478 aa17.5■□□□□ 0.39
CCDC90B-215ENST00000529745 MSRAQ9UJ68 235 aa17.5■□□□□ 0.39
CCDC90B-215ENST00000529745 PCDHA10Q9Y5I2 948 aa17.5■□□□□ 0.39
CCDC90B-215ENST00000529745 IGSF9BQ9UPX0 1349 aa17.49■□□□□ 0.39
CCDC90B-215ENST00000529745 POTEB3A0JP26 581 aa17.49■□□□□ 0.39
CCDC90B-215ENST00000529745 DDX39AO00148 427 aaKnown RBP17.49■□□□□ 0.39
CCDC90B-215ENST00000529745 PSMD10O75832 226 aa17.49■□□□□ 0.39
CCDC90B-215ENST00000529745 GCFC2P16383 781 aaKnown RBP17.49■□□□□ 0.39
CCDC90B-215ENST00000529745 TCTN1Q2MV58 587 aa17.49■□□□□ 0.39
CCDC90B-215ENST00000529745 POTEBQ6S5H4 581 aa17.49■□□□□ 0.39
CCDC90B-215ENST00000529745 RUFY4Q6ZNE9 571 aa17.49■□□□□ 0.39
CCDC90B-215ENST00000529745 RDM1Q8NG50 284 aa17.49■□□□□ 0.39
CCDC90B-215ENST00000529745 ETNPPLQ8TBG4 499 aa17.49■□□□□ 0.39
CCDC90B-215ENST00000529745 TCEAL9Q9UHQ7 104 aa17.49■□□□□ 0.39
CCDC90B-215ENST00000529745 PCDHA2Q9Y5H9 948 aa17.49■□□□□ 0.39
CCDC90B-215ENST00000529745 COL4A6Q14031 1691 aa17.48■□□□□ 0.39
CCDC90B-215ENST00000529745 CCDC194A0A1B0GVG4 234 aa17.48■□□□□ 0.39
CCDC90B-215ENST00000529745 SMIM35A0A1B0GVV1 85 aa17.48■□□□□ 0.39
CCDC90B-215ENST00000529745 WDR64B1ANS9 1081 aa17.48■□□□□ 0.39
CCDC90B-215ENST00000529745 TDP2O95551 362 aa17.48■□□□□ 0.39
CCDC90B-215ENST00000529745 PSAPP07602 524 aa17.48■□□□□ 0.39
CCDC90B-215ENST00000529745 ATP4AP20648 1035 aa17.48■□□□□ 0.39
CCDC90B-215ENST00000529745 SFNP31947 248 aa17.48■□□□□ 0.39
CCDC90B-215ENST00000529745 IKBKEQ14164 716 aa17.48■□□□□ 0.39
CCDC90B-215ENST00000529745 PDXDC2PQ6P474 469 aa17.48■□□□□ 0.39
CCDC90B-215ENST00000529745 RSPH3Q86UC2 560 aa17.48■□□□□ 0.39
CCDC90B-215ENST00000529745 DBF4BQ8NFT6 615 aa17.48■□□□□ 0.39
CCDC90B-215ENST00000529745 BBXQ8WY36 941 aaPredicted RBP17.48■□□□□ 0.39
CCDC90B-215ENST00000529745 TNFRSF25Q93038 417 aa17.48■□□□□ 0.39
CCDC90B-215ENST00000529745 ZSCAN31Q96LW9 406 aaPredicted RBP17.48■□□□□ 0.39
CCDC90B-215ENST00000529745 NAP1L4Q99733 375 aaKnown RBP17.48■□□□□ 0.39
CCDC90B-215ENST00000529745 LLPHQ9BRT6 129 aaKnown RBP17.48■□□□□ 0.39
CCDC90B-215ENST00000529745 GJB4Q9NTQ9 266 aa17.48■□□□□ 0.39
CCDC90B-215ENST00000529745 TRPC6Q9Y210 931 aa17.48■□□□□ 0.39
CCDC90B-215ENST00000529745 YBX2Q9Y2T7 364 aaKnown RBP17.48■□□□□ 0.39
CCDC90B-215ENST00000529745 SQORQ9Y6N5 450 aa17.48■□□□□ 0.39
CCDC90B-215ENST00000529745 CHD9Q3L8U1 2897 aa17.47■□□□□ 0.39
CCDC90B-215ENST00000529745 PIEZO1Q92508 2521 aa17.47■□□□□ 0.39
CCDC90B-215ENST00000529745 BACH1O14867 736 aa17.47■□□□□ 0.39
CCDC90B-215ENST00000529745 GAS7O60861 476 aa17.47■□□□□ 0.39
CCDC90B-215ENST00000529745 CHRNA1P02708 482 aa17.47■□□□□ 0.39
CCDC90B-215ENST00000529745 KCNJ6P48051 423 aa17.47■□□□□ 0.39
CCDC90B-215ENST00000529745 JAK3P52333 1124 aa17.47■□□□□ 0.39
CCDC90B-215ENST00000529745 INF2Q27J81 1249 aa17.47■□□□□ 0.39
CCDC90B-215ENST00000529745 ZNF484Q5JVG2 852 aa17.47■□□□□ 0.39
CCDC90B-215ENST00000529745 LRCH2Q5VUJ6 765 aa17.47■□□□□ 0.39
CCDC90B-215ENST00000529745 SWSAP1Q6NVH7 229 aa17.47■□□□□ 0.39
CCDC90B-215ENST00000529745 FAM43BQ6ZT52 329 aaPredicted RBP17.47■□□□□ 0.39
CCDC90B-215ENST00000529745 NEK8Q86SG6 692 aa17.47■□□□□ 0.39
CCDC90B-215ENST00000529745 HERC6Q8IVU3 1022 aa17.47■□□□□ 0.39
CCDC90B-215ENST00000529745 APBB2Q92870 758 aa17.47■□□□□ 0.39
CCDC90B-215ENST00000529745 TEKT3Q9BXF9 490 aa17.47■□□□□ 0.39
CCDC90B-215ENST00000529745 KCNMB3Q9NPA1 279 aa17.47■□□□□ 0.39
CCDC90B-215ENST00000529745 SH2B1Q9NRF2 756 aaPredicted RBP17.47■□□□□ 0.39
CCDC90B-215ENST00000529745 KDM3AQ9Y4C1 1321 aa17.47■□□□□ 0.39
CCDC90B-215ENST00000529745 ZBTB42B2RXF5 422 aa17.46■□□□□ 0.39
CCDC90B-215ENST00000529745 TBX3O15119 743 aa17.46■□□□□ 0.39
CCDC90B-215ENST00000529745 JAK2O60674 1132 aa17.46■□□□□ 0.39
CCDC90B-215ENST00000529745 MMP1P03956 469 aa17.46■□□□□ 0.39
CCDC90B-215ENST00000529745 KRT2P35908 639 aa17.46■□□□□ 0.39
CCDC90B-215ENST00000529745 MTHFD1LQ6UB35 978 aa17.46■□□□□ 0.39
CCDC90B-215ENST00000529745 NME8Q8N427 588 aa17.46■□□□□ 0.39
CCDC90B-215ENST00000529745 OXER1Q8TDS5 423 aa17.46■□□□□ 0.39
CCDC90B-215ENST00000529745 ADAMTS19Q8TE59 1207 aa17.46■□□□□ 0.39
CCDC90B-215ENST00000529745 DNAJB3Q8WWF6 145 aa17.46■□□□□ 0.39
CCDC90B-215ENST00000529745 ATXN2LQ8WWM7 1075 aaKnown RBP17.46■□□□□ 0.39
CCDC90B-215ENST00000529745 FAM167AQ96KS9 214 aa17.46■□□□□ 0.39
CCDC90B-215ENST00000529745 FAM20AQ96MK3 541 aa17.46■□□□□ 0.39
CCDC90B-215ENST00000529745 NKX2-4Q9H2Z4 354 aa17.46■□□□□ 0.39
CCDC90B-215ENST00000529745 SLC28A3Q9HAS3 691 aa17.46■□□□□ 0.39
CCDC90B-215ENST00000529745 BRMS1Q9HCU9 246 aa17.46■□□□□ 0.39
CCDC90B-215ENST00000529745 DISC1Q9NRI5 854 aa17.46■□□□□ 0.39
CCDC90B-215ENST00000529745 DDX25Q9UHL0 483 aaKnown RBP17.46■□□□□ 0.39
CCDC90B-215ENST00000529745 ARIH1Q9Y4X5 557 aaPredicted RBP17.46■□□□□ 0.39
CCDC90B-215ENST00000529745 MYO9BQ13459 2157 aa17.46■□□□□ 0.39
CCDC90B-215ENST00000529745 CTSHP09668 335 aa17.45■□□□□ 0.38
CCDC90B-215ENST00000529745 RABGGTBP53611 331 aa17.45■□□□□ 0.38
CCDC90B-215ENST00000529745 IGBP1P78318 339 aa17.45■□□□□ 0.38
CCDC90B-215ENST00000529745 DEFB103AP81534 67 aa17.45■□□□□ 0.38
CCDC90B-215ENST00000529745 MRPS6P82932 125 aaKnown RBP17.45■□□□□ 0.38
CCDC90B-215ENST00000529745 GRIN2CQ14957 1233 aa17.45■□□□□ 0.38
CCDC90B-215ENST00000529745 RABEP1Q15276 862 aa17.45■□□□□ 0.38
CCDC90B-215ENST00000529745 SEPT8Q92599 483 aa17.45■□□□□ 0.38
CCDC90B-215ENST00000529745 OSBPL7Q9BZF2 842 aa17.45■□□□□ 0.38
CCDC90B-215ENST00000529745 UNC45AQ9H3U1 944 aa17.45■□□□□ 0.38
CCDC90B-215ENST00000529745 GABBR1Q9UBS5 961 aa17.45■□□□□ 0.38
CCDC90B-215ENST00000529745 RALGAPA2Q2PPJ7 1873 aa17.44■□□□□ 0.38
CCDC90B-215ENST00000529745 KIF28PB7ZC32 967 aa17.44■□□□□ 0.38
CCDC90B-215ENST00000529745 SLC37A4O43826 429 aa17.44■□□□□ 0.38
CCDC90B-215ENST00000529745 ZNF862O60290 1169 aa17.44■□□□□ 0.38
CCDC90B-215ENST00000529745 DTNBO60941 627 aa17.44■□□□□ 0.38
CCDC90B-215ENST00000529745 GJB5O95377 273 aa17.44■□□□□ 0.38
CCDC90B-215ENST00000529745 LETM2Q2VYF4 491 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms