RNA–Protein interactions for RNA: ENST00000529637.5

USP48-213, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 1 (best) BASIC

Gene USP48, Length 3,228 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-213ENST00000529637 UBLCP1Q8WVY7 318 aaPredicted RBP15.51■□□□□ 0.07
USP48-213ENST00000529637 TATDN2Q93075 761 aa15.51■□□□□ 0.07
USP48-213ENST00000529637 ZC3H12CQ9C0D7 883 aaKnown RBP15.51■□□□□ 0.07
USP48-213ENST00000529637 NOD2Q9HC29 1040 aa15.51■□□□□ 0.07
USP48-213ENST00000529637 LRRC4BQ9NT99 713 aa15.51■□□□□ 0.07
USP48-213ENST00000529637 STK17AQ9UEE5 414 aa15.51■□□□□ 0.07
USP48-213ENST00000529637 SERPINB13Q9UIV8 391 aa15.51■□□□□ 0.07
USP48-213ENST00000529637 FBXL5Q9UKA1 691 aa15.51■□□□□ 0.07
USP48-213ENST00000529637 FAM196BA6NMK8 535 aa15.51■□□□□ 0.07
USP48-213ENST00000529637 ATP6V1G2O95670 118 aa15.51■□□□□ 0.07
USP48-213ENST00000529637 IL1R1P14778 569 aa15.51■□□□□ 0.07
USP48-213ENST00000529637 IKQ13123 557 aaPredicted RBP15.51■□□□□ 0.07
USP48-213ENST00000529637 TRIM6Q9C030 488 aaPredicted RBP15.51■□□□□ 0.07
USP48-213ENST00000529637 RIOX1Q9H6W3 641 aa15.51■□□□□ 0.07
USP48-213ENST00000529637 USP17L10C9JJH3 530 aa15.51■□□□□ 0.07
USP48-213ENST00000529637 PPP1R12AO14974 1030 aaPredicted RBP15.51■□□□□ 0.07
USP48-213ENST00000529637 MYBP10242 640 aa15.51■□□□□ 0.07
USP48-213ENST00000529637 PPP2R2AP63151 447 aa15.51■□□□□ 0.07
USP48-213ENST00000529637 TCP10Q12799 353 aa15.51■□□□□ 0.07
USP48-213ENST00000529637 PPP1R7Q15435 360 aa15.51■□□□□ 0.07
USP48-213ENST00000529637 MAN2A1Q16706 1144 aa15.51■□□□□ 0.07
USP48-213ENST00000529637 MEI1Q5TIA1 1274 aa15.51■□□□□ 0.07
USP48-213ENST00000529637 PDXDC1Q6P996 788 aa15.51■□□□□ 0.07
USP48-213ENST00000529637 CPLX4Q7Z7G2 160 aa15.51■□□□□ 0.07
USP48-213ENST00000529637 ARFGAP2Q8N6H7 521 aa15.51■□□□□ 0.07
USP48-213ENST00000529637 RAD54LQ92698 747 aa15.51■□□□□ 0.07
USP48-213ENST00000529637 ATP6V0A4Q9HBG4 840 aa15.51■□□□□ 0.07
USP48-213ENST00000529637 PCDHA12Q9UN75 941 aa15.51■□□□□ 0.07
USP48-213ENST00000529637 TMCO5BA8MYB1 307 aa15.5■□□□□ 0.07
USP48-213ENST00000529637 TTLL1O95922 423 aa15.5■□□□□ 0.07
USP48-213ENST00000529637 KCNMA1Q12791 1236 aa15.5■□□□□ 0.07
USP48-213ENST00000529637 CENPPQ6IPU0 288 aa15.5■□□□□ 0.07
USP48-213ENST00000529637 CUL5Q93034 780 aa15.5■□□□□ 0.07
USP48-213ENST00000529637 MTMR9Q96QG7 549 aa15.5■□□□□ 0.07
USP48-213ENST00000529637 ISCUQ9H1K1 167 aa15.5■□□□□ 0.07
USP48-213ENST00000529637 PSTPIP2Q9H939 334 aa15.5■□□□□ 0.07
USP48-213ENST00000529637 DDX4Q9NQI0 724 aaKnown RBP15.5■□□□□ 0.07
USP48-213ENST00000529637 USP17L15C9J2P7 530 aa15.5■□□□□ 0.07
USP48-213ENST00000529637 USP17L13C9JLJ4 530 aa15.5■□□□□ 0.07
USP48-213ENST00000529637 USP17L11C9JVI0 530 aa15.5■□□□□ 0.07
USP48-213ENST00000529637 USP17L18D6R9N7 530 aa15.5■□□□□ 0.07
USP48-213ENST00000529637 USP17L22D6RA61 530 aa15.5■□□□□ 0.07
USP48-213ENST00000529637 USP17L17D6RBQ6 530 aa15.5■□□□□ 0.07
USP48-213ENST00000529637 USP17L19D6RCP7 530 aa15.5■□□□□ 0.07
USP48-213ENST00000529637 USP17L20D6RJB6 530 aa15.5■□□□□ 0.07
USP48-213ENST00000529637 BBOX1O75936 387 aa15.5■□□□□ 0.07
USP48-213ENST00000529637 RBM5P52756 815 aaKnown RBP eCLIP15.5■□□□□ 0.07
USP48-213ENST00000529637 USP17L24Q0WX57 530 aa15.5■□□□□ 0.07
USP48-213ENST00000529637 MYO1EQ12965 1108 aa15.5■□□□□ 0.07
USP48-213ENST00000529637 LACTB2Q53H82 288 aaPredicted RBP15.5■□□□□ 0.07
USP48-213ENST00000529637 USP17L6PQ6QN14 398 aa15.5■□□□□ 0.07
USP48-213ENST00000529637 RNF10Q8N5U6 811 aaKnown RBP15.5■□□□□ 0.07
USP48-213ENST00000529637 TCP11Q8WWU5 503 aa15.5■□□□□ 0.07
USP48-213ENST00000529637 JMJD4Q9H9V9 463 aa15.5■□□□□ 0.07
USP48-213ENST00000529637 C5orf60A6NFR6 353 aa15.49■□□□□ 0.07
USP48-213ENST00000529637 SRRM3A6NNA2 597 aaPredicted RBP15.49■□□□□ 0.07
USP48-213ENST00000529637 KCNK3O14649 394 aa15.49■□□□□ 0.07
USP48-213ENST00000529637 GYS1P13807 737 aa15.49■□□□□ 0.07
USP48-213ENST00000529637 DRD4P21917 467 aa15.49■□□□□ 0.07
USP48-213ENST00000529637 EPS15P42566 896 aa15.49■□□□□ 0.07
USP48-213ENST00000529637 CACNB3P54284 484 aa15.49■□□□□ 0.07
USP48-213ENST00000529637 CCDC84Q86UT8 332 aaPredicted RBP15.49■□□□□ 0.07
USP48-213ENST00000529637 MYOCDQ8IZQ8 938 aa15.49■□□□□ 0.07
USP48-213ENST00000529637 MAGEC3Q8TD91 643 aa15.49■□□□□ 0.07
USP48-213ENST00000529637 TBC1D5Q92609 795 aa15.49■□□□□ 0.07
USP48-213ENST00000529637 DDX47Q9H0S4 455 aaKnown RBP15.49■□□□□ 0.07
USP48-213ENST00000529637 KIAA1024Q9UPX6 916 aa15.49■□□□□ 0.07
USP48-213ENST00000529637 GOLGB1Q14789 3259 aaKnown RBP15.49■□□□□ 0.07
USP48-213ENST00000529637 PNMA6FA0A0J9YX94 578 aa15.49■□□□□ 0.07
USP48-213ENST00000529637 ESYT2A0FGR8 921 aa15.49■□□□□ 0.07
USP48-213ENST00000529637 GRID2IPA4D2P6 1211 aa15.49■□□□□ 0.07
USP48-213ENST00000529637 PPIP5K2O43314 1243 aa15.49■□□□□ 0.07
USP48-213ENST00000529637 SEMA3FQ13275 785 aa15.49■□□□□ 0.07
USP48-213ENST00000529637 GKAP1Q5VSY0 366 aaPredicted RBP15.49■□□□□ 0.07
USP48-213ENST00000529637 GUF1Q8N442 669 aaKnown RBP15.49■□□□□ 0.07
USP48-213ENST00000529637 NSMCE1Q8WV22 266 aa15.49■□□□□ 0.07
USP48-213ENST00000529637 RNF14Q9UBS8 474 aa15.49■□□□□ 0.07
USP48-213ENST00000529637 TNRC6CQ9HCJ0 1690 aaKnown RBP15.49■□□□□ 0.07
USP48-213ENST00000529637 A0A087X0T9 212 aa15.49■□□□□ 0.07
USP48-213ENST00000529637 A0A1B0GUA9 196 aa15.49■□□□□ 0.07
USP48-213ENST00000529637 PVALEFA0A1B0GWK0 134 aa15.49■□□□□ 0.07
USP48-213ENST00000529637 E9PMD0 336 aa15.49■□□□□ 0.07
USP48-213ENST00000529637 FAM228BP0C875 321 aa15.49■□□□□ 0.07
USP48-213ENST00000529637 FXR2P51116 673 aaKnown RBP eCLIP15.49■□□□□ 0.073e-8■□□□□ 9.3
USP48-213ENST00000529637 ZNF543Q08ER8 600 aa15.49■□□□□ 0.07
USP48-213ENST00000529637 NAB2Q15742 525 aa15.49■□□□□ 0.07
USP48-213ENST00000529637 HERC4Q5GLZ8 1057 aaPredicted RBP15.49■□□□□ 0.07
USP48-213ENST00000529637 FAM26FQ5R3K3 315 aa15.49■□□□□ 0.07
USP48-213ENST00000529637 LRIG3Q6UXM1 1119 aa15.49■□□□□ 0.07
USP48-213ENST00000529637 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.49■□□□□ 0.07
USP48-213ENST00000529637 PANK4Q9NVE7 773 aa15.49■□□□□ 0.07
USP48-213ENST00000529637 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.49■□□□□ 0.07
USP48-213ENST00000529637 ADAMTS1Q9UHI8 967 aa15.49■□□□□ 0.07
USP48-213ENST00000529637 TMEM59LQ9UK28 342 aa15.49■□□□□ 0.07
USP48-213ENST00000529637 DAPK3O43293 454 aa15.48■□□□□ 0.07
USP48-213ENST00000529637 HLA-DOAP06340 250 aa15.48■□□□□ 0.07
USP48-213ENST00000529637 CLTAP09496 248 aa15.48■□□□□ 0.07
USP48-213ENST00000529637 KIAA0753Q2KHM9 967 aa15.48■□□□□ 0.07
USP48-213ENST00000529637 MSL1Q68DK7 614 aa15.48■□□□□ 0.07
USP48-213ENST00000529637 CCDC50Q8IVM0 306 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms