RNA–Protein interactions for RNA: ENST00000529379.1

NUP98-216, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-216ENST00000529379 CNOT6Q9ULM6 557 aaKnown RBP6.93□□□□□ -1.3
NUP98-216ENST00000529379 KCTD3Q9Y597 815 aa6.93□□□□□ -1.3
NUP98-216ENST00000529379 ZNF839A8K0R7 811 aa6.92□□□□□ -1.3
NUP98-216ENST00000529379 C8AP07357 584 aa6.92□□□□□ -1.3
NUP98-216ENST00000529379 SMAD4Q13485 552 aaKnown RBP6.92□□□□□ -1.3
NUP98-216ENST00000529379 PHF19Q5T6S3 580 aa6.92□□□□□ -1.3
NUP98-216ENST00000529379 ESRP1Q6NXG1 681 aaKnown RBP6.92□□□□□ -1.3
NUP98-216ENST00000529379 DTX3Q8N9I9 347 aa6.92□□□□□ -1.3
NUP98-216ENST00000529379 ZSWIM3Q96MP5 696 aa6.92□□□□□ -1.3
NUP98-216ENST00000529379 GBP4Q96PP9 640 aa6.92□□□□□ -1.3
NUP98-216ENST00000529379 KRTAP9-9Q9BYP9 154 aa6.92□□□□□ -1.3
NUP98-216ENST00000529379 KRTAP9-4Q9BYQ2 154 aa6.92□□□□□ -1.3
NUP98-216ENST00000529379 PCDH18Q9HCL0 1135 aa6.92□□□□□ -1.3
NUP98-216ENST00000529379 TOMM22Q9NS69 142 aa6.92□□□□□ -1.3
NUP98-216ENST00000529379 ATP8A1Q9Y2Q0 1164 aa6.92□□□□□ -1.3
NUP98-216ENST00000529379 PMF1-BGLAPU3KQ54 211 aa6.92□□□□□ -1.3
NUP98-216ENST00000529379 ZEB2O60315 1214 aa6.91□□□□□ -1.3
NUP98-216ENST00000529379 FNTBP49356 437 aa6.91□□□□□ -1.3
NUP98-216ENST00000529379 OCRLQ01968 901 aa6.91□□□□□ -1.3
NUP98-216ENST00000529379 STAT4Q14765 748 aa6.91□□□□□ -1.3
NUP98-216ENST00000529379 RTP5Q14D33 572 aa6.91□□□□□ -1.3
NUP98-216ENST00000529379 ZNF124Q15973 351 aa6.91□□□□□ -1.3
NUP98-216ENST00000529379 SKIDA1Q1XH10 827 aa6.91□□□□□ -1.3
NUP98-216ENST00000529379 CNKSR3Q6P9H4 555 aa6.91□□□□□ -1.3
NUP98-216ENST00000529379 KYQ8NBH2 561 aa6.91□□□□□ -1.3
NUP98-216ENST00000529379 ZCRB1Q8TBF4 217 aaKnown RBP6.91□□□□□ -1.3
NUP98-216ENST00000529379 FNIP1Q8TF40 1166 aa6.91□□□□□ -1.3
NUP98-216ENST00000529379 ERCC4Q92889 916 aaPredicted RBP6.91□□□□□ -1.3
NUP98-216ENST00000529379 ZBTB8AQ96BR9 441 aa6.91□□□□□ -1.3
NUP98-216ENST00000529379 FOXRED1Q96CU9 486 aaPredicted RBP6.91□□□□□ -1.3
NUP98-216ENST00000529379 C16orf92Q96LL3 132 aa6.91□□□□□ -1.3
NUP98-216ENST00000529379 TMEM209Q96SK2 561 aa6.91□□□□□ -1.3
NUP98-216ENST00000529379 BRINP2Q9C0B6 783 aa6.91□□□□□ -1.3
NUP98-216ENST00000529379 DLL4Q9NR61 685 aa6.91□□□□□ -1.3
NUP98-216ENST00000529379 ARHGAP28Q9P2N2 729 aa6.91□□□□□ -1.3
NUP98-216ENST00000529379 PRAMEF22A3QJZ6 481 aa6.9□□□□□ -1.3
NUP98-216ENST00000529379 GOLGA6L22H0YM25 854 aa6.9□□□□□ -1.3
NUP98-216ENST00000529379 BRINP1O60477 761 aa6.9□□□□□ -1.3
NUP98-216ENST00000529379 MPIG6BO95866 241 aa6.9□□□□□ -1.3
NUP98-216ENST00000529379 CYP17A1P05093 508 aa6.9□□□□□ -1.3
NUP98-216ENST00000529379 CPEP16870 476 aa6.9□□□□□ -1.3
NUP98-216ENST00000529379 PTGS1P23219 599 aa6.9□□□□□ -1.3
NUP98-216ENST00000529379 RAP1GAPP47736 663 aa6.9□□□□□ -1.3
NUP98-216ENST00000529379 CDKN1CP49918 316 aaPredicted RBP6.9□□□□□ -1.3
NUP98-216ENST00000529379 LINC00310P59036 64 aa6.9□□□□□ -1.3
NUP98-216ENST00000529379 SMAD3P84022 425 aaKnown RBP6.9□□□□□ -1.3
NUP98-216ENST00000529379 SMAD2Q15796 467 aaKnown RBP6.9□□□□□ -1.3
NUP98-216ENST00000529379 KCNA10Q16322 511 aa6.9□□□□□ -1.3
NUP98-216ENST00000529379 ATP13A4Q4VNC1 1196 aa6.9□□□□□ -1.3
NUP98-216ENST00000529379 PRAMEF18Q5VWM3 479 aa6.9□□□□□ -1.3
NUP98-216ENST00000529379 RTN4RL1Q86UN2 441 aaPredicted RBP6.9□□□□□ -1.3
NUP98-216ENST00000529379 HIPK4Q8NE63 616 aa6.9□□□□□ -1.3
NUP98-216ENST00000529379 ATL2Q8NHH9 583 aa6.9□□□□□ -1.3
NUP98-216ENST00000529379 IGDCC4Q8TDY8 1250 aa6.9□□□□□ -1.3
NUP98-216ENST00000529379 PWWP2AQ96N64 755 aa6.9□□□□□ -1.3
NUP98-216ENST00000529379 ZMAT4Q9H898 229 aa6.9□□□□□ -1.3
NUP98-216ENST00000529379 SPATA6Q9NWH7 488 aaPredicted RBP6.9□□□□□ -1.3
NUP98-216ENST00000529379 UCKL1Q9NWZ5 548 aa6.9□□□□□ -1.3
NUP98-216ENST00000529379 APOBEC2Q9Y235 224 aaKnown RBP6.9□□□□□ -1.3
NUP98-216ENST00000529379 ASB1Q9Y576 335 aa6.9□□□□□ -1.3
NUP98-216ENST00000529379 EIF4G1Q04637 1599 aaKnown RBP6.9□□□□□ -1.31
NUP98-216ENST00000529379 NPIPB6E9PJ23 425 aa6.89□□□□□ -1.31
NUP98-216ENST00000529379 GPR39O43194 453 aa6.89□□□□□ -1.31
NUP98-216ENST00000529379 IL18BPO95998 194 aa6.89□□□□□ -1.31
NUP98-216ENST00000529379 NCLP19338 710 aaKnown RBP6.89□□□□□ -1.31
NUP98-216ENST00000529379 TMPRSS15P98073 1019 aa6.89□□□□□ -1.31
NUP98-216ENST00000529379 DLX2Q07687 328 aaPredicted RBP6.89□□□□□ -1.31
NUP98-216ENST00000529379 C11orf74Q86VG3 221 aa6.89□□□□□ -1.31
NUP98-216ENST00000529379 CILP2Q8IUL8 1156 aa6.89□□□□□ -1.31
NUP98-216ENST00000529379 PASD1Q8IV76 773 aa6.89□□□□□ -1.31
NUP98-216ENST00000529379 WDR66Q8TBY9 1149 aa6.89□□□□□ -1.31
NUP98-216ENST00000529379 AMNQ9BXJ7 453 aa6.89□□□□□ -1.31
NUP98-216ENST00000529379 MS4A5Q9H3V2 200 aa6.89□□□□□ -1.31
NUP98-216ENST00000529379 MCM8Q9UJA3 840 aa6.89□□□□□ -1.31
NUP98-216ENST00000529379 NOP58Q9Y2X3 529 aaKnown RBP6.89□□□□□ -1.31
NUP98-216ENST00000529379 GOLGA3Q08378 1498 aa6.89□□□□□ -1.31
NUP98-216ENST00000529379 SMARCA4P51532 1647 aa6.88□□□□□ -1.31
NUP98-216ENST00000529379 CDK11BP21127 795 aaKnown RBP6.88□□□□□ -1.31
NUP98-216ENST00000529379 GLRBP48167 497 aa6.88□□□□□ -1.31
NUP98-216ENST00000529379 EVA1CP58658 441 aa6.88□□□□□ -1.31
NUP98-216ENST00000529379 EPHA7Q15375 998 aa6.88□□□□□ -1.31
NUP98-216ENST00000529379 TERF2Q15554 542 aa6.88□□□□□ -1.31
NUP98-216ENST00000529379 PKN1Q16512 942 aa6.88□□□□□ -1.31
NUP98-216ENST00000529379 VWA3BQ502W6 1294 aa6.88□□□□□ -1.31
NUP98-216ENST00000529379 ZNF385BQ569K4 471 aa6.88□□□□□ -1.31
NUP98-216ENST00000529379 LRSAM1Q6UWE0 723 aa6.88□□□□□ -1.31
NUP98-216ENST00000529379 TTLL6Q8N841 843 aa6.88□□□□□ -1.31
NUP98-216ENST00000529379 PRPF38AQ8NAV1 312 aaKnown RBP6.88□□□□□ -1.31
NUP98-216ENST00000529379 RTF1Q92541 710 aaKnown RBP6.88□□□□□ -1.31
NUP98-216ENST00000529379 DACT3Q96B18 629 aaPredicted RBP6.88□□□□□ -1.31
NUP98-216ENST00000529379 CLIC6Q96NY7 704 aa6.88□□□□□ -1.31
NUP98-216ENST00000529379 INCENPQ9NQS7 918 aa6.88□□□□□ -1.31
NUP98-216ENST00000529379 ARHGAP20Q9P2F6 1191 aa6.88□□□□□ -1.31
NUP98-216ENST00000529379 ZFP69BQ9UJL9 534 aa6.88□□□□□ -1.31
NUP98-216ENST00000529379 CROTQ9UKG9 612 aa6.88□□□□□ -1.31
NUP98-216ENST00000529379 SMARCA2P51531 1590 aa6.87□□□□□ -1.31
NUP98-216ENST00000529379 SOGA1O94964 1423 aa6.87□□□□□ -1.31
NUP98-216ENST00000529379 PHLDB1Q86UU1 1377 aa6.87□□□□□ -1.31
NUP98-216ENST00000529379 LCHNA4D1U4 455 aa6.87□□□□□ -1.31
NUP98-216ENST00000529379 RFXAPO00287 272 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms