RNA–Protein interactions for RNA: ENST00000528149.5

CCDC90B-210, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-210ENST00000528149 CACNA1HO95180 2353 aa13.06□□□□□ -0.32
CCDC90B-210ENST00000528149 A6NJR5 290 aa13.06□□□□□ -0.32
CCDC90B-210ENST00000528149 DCXO43602 365 aa13.06□□□□□ -0.32
CCDC90B-210ENST00000528149 F13A1P00488 732 aa13.06□□□□□ -0.32
CCDC90B-210ENST00000528149 CYP2C9P11712 490 aa13.06□□□□□ -0.32
CCDC90B-210ENST00000528149 IL9P15248 144 aa13.06□□□□□ -0.32
CCDC90B-210ENST00000528149 MCM7P33993 719 aa13.06□□□□□ -0.32
CCDC90B-210ENST00000528149 SETQ01105 290 aaPredicted RBP13.06□□□□□ -0.32
CCDC90B-210ENST00000528149 ITGB3BPQ13352 177 aaPredicted RBP13.06□□□□□ -0.32
CCDC90B-210ENST00000528149 ITGA7Q13683 1181 aa13.06□□□□□ -0.32
CCDC90B-210ENST00000528149 NBPF20Q3BBV1 942 aa13.06□□□□□ -0.32
CCDC90B-210ENST00000528149 CELF3Q5SZQ8 465 aaKnown RBP13.06□□□□□ -0.32
CCDC90B-210ENST00000528149 MOXD1Q6UVY6 613 aa13.06□□□□□ -0.32
CCDC90B-210ENST00000528149 NIPA1Q7RTP0 329 aa13.06□□□□□ -0.32
CCDC90B-210ENST00000528149 DHX37Q8IY37 1157 aaKnown RBP13.06□□□□□ -0.32
CCDC90B-210ENST00000528149 SLC43A3Q8NBI5 491 aa13.06□□□□□ -0.32
CCDC90B-210ENST00000528149 GDPD5Q8WTR4 605 aa13.06□□□□□ -0.32
CCDC90B-210ENST00000528149 WNT8BQ93098 351 aa13.06□□□□□ -0.32
CCDC90B-210ENST00000528149 SPATA33Q96N06 139 aa13.06□□□□□ -0.32
CCDC90B-210ENST00000528149 IPO9Q96P70 1041 aaKnown RBP13.06□□□□□ -0.32
CCDC90B-210ENST00000528149 UBE2ZQ9H832 354 aaPredicted RBP13.06□□□□□ -0.32
CCDC90B-210ENST00000528149 KCNH7Q9NS40 1196 aa13.06□□□□□ -0.32
CCDC90B-210ENST00000528149 ZDHHC9Q9Y397 364 aa13.06□□□□□ -0.32
CCDC90B-210ENST00000528149 SCN5AQ14524 2016 aa13.06□□□□□ -0.32
CCDC90B-210ENST00000528149 KAT6AQ92794 2004 aa13.06□□□□□ -0.32
CCDC90B-210ENST00000528149 ARID2Q68CP9 1835 aa13.05□□□□□ -0.32
CCDC90B-210ENST00000528149 CYP3A7-CYP3A51PA0A087WV96 503 aa13.05□□□□□ -0.32
CCDC90B-210ENST00000528149 DDX39AO00148 427 aaKnown RBP13.05□□□□□ -0.32
CCDC90B-210ENST00000528149 MEIS1O00470 390 aa13.05□□□□□ -0.32
CCDC90B-210ENST00000528149 BRD1O95696 1058 aa13.05□□□□□ -0.32
CCDC90B-210ENST00000528149 GCFC2P16383 781 aaKnown RBP13.05□□□□□ -0.32
CCDC90B-210ENST00000528149 CYP3A7P24462 503 aa13.05□□□□□ -0.32
CCDC90B-210ENST00000528149 ICAM3P32942 547 aa13.05□□□□□ -0.32
CCDC90B-210ENST00000528149 ZNF174Q15697 407 aa13.05□□□□□ -0.32
CCDC90B-210ENST00000528149 FOXD4L6Q3SYB3 417 aaPredicted RBP13.05□□□□□ -0.32
CCDC90B-210ENST00000528149 FOXD4L3Q6VB84 417 aaPredicted RBP13.05□□□□□ -0.32
CCDC90B-210ENST00000528149 HFE2Q6ZVN8 426 aa13.05□□□□□ -0.32
CCDC90B-210ENST00000528149 RPUSD2Q8IZ73 545 aaKnown RBP13.05□□□□□ -0.32
CCDC90B-210ENST00000528149 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.05□□□□□ -0.32
CCDC90B-210ENST00000528149 MBOAT7Q96N66 472 aa13.05□□□□□ -0.32
CCDC90B-210ENST00000528149 FTOQ9C0B1 505 aaKnown RBP eCLIP13.05□□□□□ -0.32
CCDC90B-210ENST00000528149 SPC25Q9HBM1 224 aa13.05□□□□□ -0.32
CCDC90B-210ENST00000528149 AGO4Q9HCK5 861 aaKnown RBP13.05□□□□□ -0.32
CCDC90B-210ENST00000528149 Q9Y3F1 56 aa13.05□□□□□ -0.32
CCDC90B-210ENST00000528149 PCDHB6Q9Y5E3 794 aa13.05□□□□□ -0.32
CCDC90B-210ENST00000528149 C5orf42Q9H799 3197 aa13.05□□□□□ -0.32
CCDC90B-210ENST00000528149 PTPRZ1P23471 2315 aaPredicted RBP13.04□□□□□ -0.32
CCDC90B-210ENST00000528149 MSH4O15457 936 aa13.04□□□□□ -0.32
CCDC90B-210ENST00000528149 NEMFO60524 1076 aa13.04□□□□□ -0.32
CCDC90B-210ENST00000528149 KCNA5P22460 613 aa13.04□□□□□ -0.32
CCDC90B-210ENST00000528149 TRAPPC10P48553 1259 aa13.04□□□□□ -0.32
CCDC90B-210ENST00000528149 CPT1AP50416 773 aa13.04□□□□□ -0.32
CCDC90B-210ENST00000528149 LEXMQ3ZCV2 418 aa13.04□□□□□ -0.32
CCDC90B-210ENST00000528149 Q4G0T1 1027 aa13.04□□□□□ -0.32
CCDC90B-210ENST00000528149 FAM47CQ5HY64 1035 aa13.04□□□□□ -0.32
CCDC90B-210ENST00000528149 UTP14CQ5TAP6 766 aaKnown RBP13.04□□□□□ -0.32
CCDC90B-210ENST00000528149 PPP4R3AQ6IN85 833 aa13.04□□□□□ -0.32
CCDC90B-210ENST00000528149 GDF6Q6KF10 455 aaPredicted RBP13.04□□□□□ -0.32
CCDC90B-210ENST00000528149 ETNPPLQ8TBG4 499 aa13.04□□□□□ -0.32
CCDC90B-210ENST00000528149 CDHR1Q96JP9 859 aa13.04□□□□□ -0.32
CCDC90B-210ENST00000528149 PCYT2Q99447 389 aa13.04□□□□□ -0.32
CCDC90B-210ENST00000528149 NAP1L4Q99733 375 aaKnown RBP13.04□□□□□ -0.32
CCDC90B-210ENST00000528149 C16orf70Q9BSU1 422 aa13.04□□□□□ -0.32
CCDC90B-210ENST00000528149 MTG1Q9BT17 334 aaPredicted RBP13.04□□□□□ -0.32
CCDC90B-210ENST00000528149 OSBPL7Q9BZF2 842 aa13.04□□□□□ -0.32
CCDC90B-210ENST00000528149 TMEM60Q9H2L4 133 aa13.04□□□□□ -0.32
CCDC90B-210ENST00000528149 TRIP12Q14669 1992 aaPredicted RBP13.03□□□□□ -0.32
CCDC90B-210ENST00000528149 POTEB3A0JP26 581 aa13.03□□□□□ -0.32
CCDC90B-210ENST00000528149 IPO5O00410 1097 aaKnown RBP13.03□□□□□ -0.32
CCDC90B-210ENST00000528149 NKRFO15226 690 aaKnown RBP eCLIP13.03□□□□□ -0.32
CCDC90B-210ENST00000528149 CCNE2O96020 404 aa13.03□□□□□ -0.32
CCDC90B-210ENST00000528149 PSEN2P49810 448 aa13.03□□□□□ -0.32
CCDC90B-210ENST00000528149 FOXK2Q01167 660 aa13.03□□□□□ -0.32
CCDC90B-210ENST00000528149 CACNB1Q02641 598 aaPredicted RBP13.03□□□□□ -0.32
CCDC90B-210ENST00000528149 RILPL1Q5EBL4 403 aa13.03□□□□□ -0.32
CCDC90B-210ENST00000528149 PTCRAQ6ISU1 281 aaPredicted RBP13.03□□□□□ -0.32
CCDC90B-210ENST00000528149 KCNV1Q6PIU1 500 aa13.03□□□□□ -0.32
CCDC90B-210ENST00000528149 POTEBQ6S5H4 581 aa13.03□□□□□ -0.32
CCDC90B-210ENST00000528149 DEFB128Q7Z7B8 93 aa13.03□□□□□ -0.32
CCDC90B-210ENST00000528149 PRSS33Q8NF86 280 aa13.03□□□□□ -0.32
CCDC90B-210ENST00000528149 PPTC7Q8NI37 304 aa13.03□□□□□ -0.32
CCDC90B-210ENST00000528149 DHX38Q92620 1227 aaKnown RBP13.03□□□□□ -0.32
CCDC90B-210ENST00000528149 CHAMP1Q96JM3 812 aa13.03□□□□□ -0.32
CCDC90B-210ENST00000528149 SLC9A7Q96T83 725 aa13.03□□□□□ -0.32
CCDC90B-210ENST00000528149 GPR20Q99678 358 aa13.03□□□□□ -0.32
CCDC90B-210ENST00000528149 ZNF577Q9BSK1 485 aa13.03□□□□□ -0.32
CCDC90B-210ENST00000528149 ZSCAN16Q9H4T2 348 aaPredicted RBP13.03□□□□□ -0.32
CCDC90B-210ENST00000528149 MLXIPQ9HAP2 919 aa13.03□□□□□ -0.32
CCDC90B-210ENST00000528149 KCNMB3Q9NPA1 279 aa13.03□□□□□ -0.32
CCDC90B-210ENST00000528149 TECTAO75443 2155 aa13.03□□□□□ -0.32
CCDC90B-210ENST00000528149 TANC1Q9C0D5 1861 aa13.02□□□□□ -0.32
CCDC90B-210ENST00000528149 PTPRSQ13332 1948 aa13.02□□□□□ -0.32
CCDC90B-210ENST00000528149 LOXHD1Q8IVV2 1947 aa13.02□□□□□ -0.32
CCDC90B-210ENST00000528149 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.02□□□□□ -0.33
CCDC90B-210ENST00000528149 GSTTP1A0A1W2PQM5 241 aa13.02□□□□□ -0.33
CCDC90B-210ENST00000528149 LGALS2P05162 132 aa13.02□□□□□ -0.33
CCDC90B-210ENST00000528149 TGFB3P10600 412 aa13.02□□□□□ -0.33
CCDC90B-210ENST00000528149 HOXD8P13378 290 aaPredicted RBP13.02□□□□□ -0.33
CCDC90B-210ENST00000528149 PDIA4P13667 645 aaKnown RBP13.02□□□□□ -0.33
CCDC90B-210ENST00000528149 MARK3P27448 753 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms