RNA–Protein interactions for RNA: ENST00000528048.5

SDHD-205, Transcript of succinate dehydrogenase complex subunit D, humanhuman

TSL 1 (best) BASIC

Gene SDHD, Length 905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-205ENST00000528048 JAK3P52333 1124 aa13.68□□□□□ -0.22
SDHD-205ENST00000528048 SMAD3P84022 425 aaKnown RBP13.68□□□□□ -0.22
SDHD-205ENST00000528048 GUCY1B3Q02153 619 aa13.68□□□□□ -0.22
SDHD-205ENST00000528048 RBL2Q08999 1139 aa13.68□□□□□ -0.22
SDHD-205ENST00000528048 NR5A1Q13285 461 aa13.68□□□□□ -0.22
SDHD-205ENST00000528048 PLCB4Q15147 1175 aa13.68□□□□□ -0.22
SDHD-205ENST00000528048 ZNF618Q5T7W0 954 aa13.68□□□□□ -0.22
SDHD-205ENST00000528048 PPP4R3AQ6IN85 833 aa13.68□□□□□ -0.22
SDHD-205ENST00000528048 LMBR1Q8WVP7 490 aa13.68□□□□□ -0.22
SDHD-205ENST00000528048 DHX38Q92620 1227 aaKnown RBP13.68□□□□□ -0.22
SDHD-205ENST00000528048 LENG9Q96B70 501 aa13.68□□□□□ -0.22
SDHD-205ENST00000528048 FAM20AQ96MK3 541 aa13.68□□□□□ -0.22
SDHD-205ENST00000528048 CTAGE1Q96RT6 745 aa13.68□□□□□ -0.22
SDHD-205ENST00000528048 PCYT2Q99447 389 aa13.68□□□□□ -0.22
SDHD-205ENST00000528048 BACH2Q9BYV9 841 aa13.68□□□□□ -0.22
SDHD-205ENST00000528048 DISC1Q9NRI5 854 aa13.68□□□□□ -0.22
SDHD-205ENST00000528048 NRBP2Q9NSY0 501 aa13.68□□□□□ -0.22
SDHD-205ENST00000528048 LRRC37A2A6NM11 1700 aa13.67□□□□□ -0.22
SDHD-205ENST00000528048 LCTP09848 1927 aa13.67□□□□□ -0.22
SDHD-205ENST00000528048 IGKV6D-21A0A0A0MT36 114 aa13.67□□□□□ -0.22
SDHD-205ENST00000528048 HOXC8P31273 242 aa13.67□□□□□ -0.22
SDHD-205ENST00000528048 HIC1Q14526 733 aa13.67□□□□□ -0.22
SDHD-205ENST00000528048 ZNF484Q5JVG2 852 aa13.67□□□□□ -0.22
SDHD-205ENST00000528048 MIER3Q7Z3K6 550 aa13.67□□□□□ -0.22
SDHD-205ENST00000528048 RDM1Q8NG50 284 aa13.67□□□□□ -0.22
SDHD-205ENST00000528048 ATP8B4Q8TF62 1192 aa13.67□□□□□ -0.22
SDHD-205ENST00000528048 MBOAT7Q96N66 472 aa13.67□□□□□ -0.22
SDHD-205ENST00000528048 GABBR1Q9UBS5 961 aa13.67□□□□□ -0.22
SDHD-205ENST00000528048 TUBE1Q9UJT0 475 aa13.67□□□□□ -0.22
SDHD-205ENST00000528048 MCM3APO60318 1980 aa13.67□□□□□ -0.22
SDHD-205ENST00000528048 EDIL3O43854 480 aa13.66□□□□□ -0.22
SDHD-205ENST00000528048 KCNJ6P48051 423 aa13.66□□□□□ -0.22
SDHD-205ENST00000528048 ST3GAL1Q11201 340 aa13.66□□□□□ -0.22
SDHD-205ENST00000528048 IKBKEQ14164 716 aa13.66□□□□□ -0.22
SDHD-205ENST00000528048 TRIM71Q2Q1W2 868 aaKnown RBP13.66□□□□□ -0.22
SDHD-205ENST00000528048 TRMT1LQ7Z2T5 733 aaKnown RBP13.66□□□□□ -0.22
SDHD-205ENST00000528048 IFNLR1Q8IU57 520 aaPredicted RBP13.66□□□□□ -0.22
SDHD-205ENST00000528048 CCDC60Q8IWA6 550 aaPredicted RBP13.66□□□□□ -0.22
SDHD-205ENST00000528048 SLFN12Q8IYM2 578 aa13.66□□□□□ -0.22
SDHD-205ENST00000528048 MARVELD3Q96A59 401 aa13.66□□□□□ -0.22
SDHD-205ENST00000528048 TMX3Q96JJ7 454 aa13.66□□□□□ -0.22
SDHD-205ENST00000528048 FAM167AQ96KS9 214 aa13.66□□□□□ -0.22
SDHD-205ENST00000528048 UNC45AQ9H3U1 944 aa13.66□□□□□ -0.22
SDHD-205ENST00000528048 MSRAQ9UJ68 235 aa13.66□□□□□ -0.22
SDHD-205ENST00000528048 CEP131Q9UPN4 1083 aa13.66□□□□□ -0.22
SDHD-205ENST00000528048 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.66□□□□□ -0.22
SDHD-205ENST00000528048 MAFBQ9Y5Q3 323 aaPredicted RBP13.66□□□□□ -0.22
SDHD-205ENST00000528048 FRMPD3Q5JV73 1810 aa13.65□□□□□ -0.22
SDHD-205ENST00000528048 KIF28PB7ZC32 967 aa13.65□□□□□ -0.22
SDHD-205ENST00000528048 M0QZ92 97 aa13.65□□□□□ -0.22
SDHD-205ENST00000528048 TBX3O15119 743 aa13.65□□□□□ -0.22
SDHD-205ENST00000528048 DKC1O60832 514 aaKnown RBP eCLIP13.65□□□□□ -0.22
SDHD-205ENST00000528048 EFCAB14O75071 495 aa13.65□□□□□ -0.22
SDHD-205ENST00000528048 PSMD10O75832 226 aa13.65□□□□□ -0.22
SDHD-205ENST00000528048 BAIAP3O94812 1187 aa13.65□□□□□ -0.22
SDHD-205ENST00000528048 CTSHP09668 335 aa13.65□□□□□ -0.22
SDHD-205ENST00000528048 ATP2B1P20020 1258 aa13.65□□□□□ -0.22
SDHD-205ENST00000528048 ADAM17P78536 824 aa13.65□□□□□ -0.22
SDHD-205ENST00000528048 ZNF697Q5TEC3 545 aa13.65□□□□□ -0.22
SDHD-205ENST00000528048 IER5Q5VY09 327 aa13.65□□□□□ -0.22
SDHD-205ENST00000528048 CNKSR3Q6P9H4 555 aa13.65□□□□□ -0.22
SDHD-205ENST00000528048 NME8Q8N427 588 aa13.65□□□□□ -0.22
SDHD-205ENST00000528048 DEFB123Q8N688 67 aa13.65□□□□□ -0.22
SDHD-205ENST00000528048 FBXO18Q8NFZ0 1043 aa13.65□□□□□ -0.22
SDHD-205ENST00000528048 BBXQ8WY36 941 aaPredicted RBP13.65□□□□□ -0.22
SDHD-205ENST00000528048 WNT8BQ93098 351 aa13.65□□□□□ -0.22
SDHD-205ENST00000528048 GJA10Q969M2 543 aa13.65□□□□□ -0.22
SDHD-205ENST00000528048 FAM49AQ9H0Q0 323 aaPredicted RBP13.65□□□□□ -0.22
SDHD-205ENST00000528048 SMC3Q9UQE7 1217 aa13.65□□□□□ -0.22
SDHD-205ENST00000528048 PCDHA2Q9Y5H9 948 aa13.65□□□□□ -0.22
SDHD-205ENST00000528048 ABHD14A-ACY1A0A1B0GW23 586 aa13.64□□□□□ -0.23
SDHD-205ENST00000528048 MBLAC1A4D2B0 266 aaPredicted RBP13.64□□□□□ -0.23
SDHD-205ENST00000528048 SLC37A4O43826 429 aa13.64□□□□□ -0.23
SDHD-205ENST00000528048 NBNO60934 754 aa13.64□□□□□ -0.23
SDHD-205ENST00000528048 CXCL10P02778 98 aa13.64□□□□□ -0.23
SDHD-205ENST00000528048 ATP2A2P16615 1042 aaKnown RBP13.64□□□□□ -0.23
SDHD-205ENST00000528048 KLRC1P26715 233 aa13.64□□□□□ -0.23
SDHD-205ENST00000528048 RAB30Q15771 203 aa13.64□□□□□ -0.23
SDHD-205ENST00000528048 EARS2Q5JPH6 523 aaKnown RBP13.64□□□□□ -0.23
SDHD-205ENST00000528048 MARCH8Q5T0T0 291 aa13.64□□□□□ -0.23
SDHD-205ENST00000528048 RASIP1Q5U651 963 aa13.64□□□□□ -0.23
SDHD-205ENST00000528048 FAM109BQ6ICB4 259 aaPredicted RBP13.64□□□□□ -0.23
SDHD-205ENST00000528048 MTHFD1LQ6UB35 978 aa13.64□□□□□ -0.23
SDHD-205ENST00000528048 RPAINQ86UA6 219 aa13.64□□□□□ -0.23
SDHD-205ENST00000528048 ETNPPLQ8TBG4 499 aa13.64□□□□□ -0.23
SDHD-205ENST00000528048 PHOSPHO2Q8TCD6 241 aa13.64□□□□□ -0.23
SDHD-205ENST00000528048 DNAJB3Q8WWF6 145 aa13.64□□□□□ -0.23
SDHD-205ENST00000528048 SEPT8Q92599 483 aa13.64□□□□□ -0.23
SDHD-205ENST00000528048 FOXP1Q9H334 677 aaPredicted RBP13.64□□□□□ -0.23
SDHD-205ENST00000528048 KCNMB3Q9NPA1 279 aa13.64□□□□□ -0.23
SDHD-205ENST00000528048 CXXC1Q9P0U4 656 aaPredicted RBP13.64□□□□□ -0.23
SDHD-205ENST00000528048 NOL7Q9UMY1 257 aaKnown RBP13.64□□□□□ -0.23
SDHD-205ENST00000528048 COL1A2P08123 1366 aa13.63□□□□□ -0.23
SDHD-205ENST00000528048 SMIM35A0A1B0GVV1 85 aa13.63□□□□□ -0.23
SDHD-205ENST00000528048 H3BQV1 296 aa13.63□□□□□ -0.23
SDHD-205ENST00000528048 MAGEB2O15479 319 aa13.63□□□□□ -0.23
SDHD-205ENST00000528048 TMOD1P28289 359 aa13.63□□□□□ -0.23
SDHD-205ENST00000528048 CALCRLQ16602 461 aa13.63□□□□□ -0.23
SDHD-205ENST00000528048 FAM26DQ5JW98 314 aa13.63□□□□□ -0.23
SDHD-205ENST00000528048 RUFY4Q6ZNE9 571 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms