RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 TRIM22Q8IYM9 498 aa16.12■□□□□ 0.17
CAPN1-212ENST00000527887 FBXO22Q8NEZ5 403 aa16.12■□□□□ 0.17
CAPN1-212ENST00000527887 ATP8B4Q8TF62 1192 aa16.12■□□□□ 0.17
CAPN1-212ENST00000527887 PHKBQ93100 1093 aa16.12■□□□□ 0.17
CAPN1-212ENST00000527887 HLA-CQ95604 372 aa16.12■□□□□ 0.17
CAPN1-212ENST00000527887 IL17RAQ96F46 866 aa16.12■□□□□ 0.17
CAPN1-212ENST00000527887 ZNF577Q9BSK1 485 aa16.12■□□□□ 0.17
CAPN1-212ENST00000527887 CDY2AQ9Y6F7 541 aa16.12■□□□□ 0.17
CAPN1-212ENST00000527887 COL1A2P08123 1366 aa16.12■□□□□ 0.17
CAPN1-212ENST00000527887 ENPP3O14638 875 aa16.11■□□□□ 0.17
CAPN1-212ENST00000527887 BACH1O14867 736 aa16.11■□□□□ 0.17
CAPN1-212ENST00000527887 KRT76Q01546 638 aa16.11■□□□□ 0.17
CAPN1-212ENST00000527887 PTPROQ16827 1216 aa16.11■□□□□ 0.17
CAPN1-212ENST00000527887 ZNF484Q5JVG2 852 aa16.11■□□□□ 0.17
CAPN1-212ENST00000527887 PDXDC2PQ6P474 469 aa16.11■□□□□ 0.17
CAPN1-212ENST00000527887 SLC26A6Q9BXS9 759 aa16.11■□□□□ 0.17
CAPN1-212ENST00000527887 OSBPL7Q9BZF2 842 aa16.11■□□□□ 0.17
CAPN1-212ENST00000527887 ZNF302Q9NR11 478 aa16.11■□□□□ 0.17
CAPN1-212ENST00000527887 RWDD3Q9Y3V2 267 aa16.11■□□□□ 0.17
CAPN1-212ENST00000527887 TRPV2Q9Y5S1 764 aa16.11■□□□□ 0.17
CAPN1-212ENST00000527887 KDM3AQ9Y4C1 1321 aa16.11■□□□□ 0.17
CAPN1-212ENST00000527887 UPP2O95045 317 aa16.1■□□□□ 0.17
CAPN1-212ENST00000527887 CCNE2O96020 404 aa16.1■□□□□ 0.17
CAPN1-212ENST00000527887 RB1P06400 928 aa16.1■□□□□ 0.17
CAPN1-212ENST00000527887 BMP1P13497 986 aa16.1■□□□□ 0.17
CAPN1-212ENST00000527887 CCT2P78371 535 aaKnown RBP16.1■□□□□ 0.17
CAPN1-212ENST00000527887 SSRP1Q08945 709 aaKnown RBP16.1■□□□□ 0.17
CAPN1-212ENST00000527887 EPC2Q52LR7 807 aa16.1■□□□□ 0.17
CAPN1-212ENST00000527887 ODR4Q5SWX8 454 aa16.1■□□□□ 0.17
CAPN1-212ENST00000527887 GALNT17Q6IS24 598 aa16.1■□□□□ 0.17
CAPN1-212ENST00000527887 MTHFD1LQ6UB35 978 aa16.1■□□□□ 0.17
CAPN1-212ENST00000527887 SPRED2Q7Z698 418 aa16.1■□□□□ 0.17
CAPN1-212ENST00000527887 ADAMTS19Q8TE59 1207 aa16.1■□□□□ 0.17
CAPN1-212ENST00000527887 GDPD5Q8WTR4 605 aa16.1■□□□□ 0.17
CAPN1-212ENST00000527887 UHRF1Q96T88 793 aaPredicted RBP16.1■□□□□ 0.17
CAPN1-212ENST00000527887 C17orf80Q9BSJ5 609 aa16.1■□□□□ 0.17
CAPN1-212ENST00000527887 CELF4Q9BZC1 486 aaKnown RBP16.1■□□□□ 0.17
CAPN1-212ENST00000527887 FAM49AQ9H0Q0 323 aaPredicted RBP16.1■□□□□ 0.17
CAPN1-212ENST00000527887 RNF216Q9NWF9 866 aaPredicted RBP16.1■□□□□ 0.17
CAPN1-212ENST00000527887 MTUS1Q9ULD2 1270 aa16.1■□□□□ 0.17
CAPN1-212ENST00000527887 MAFBQ9Y5Q3 323 aaPredicted RBP16.1■□□□□ 0.17
CAPN1-212ENST00000527887 REV3LO60673 3130 aa16.1■□□□□ 0.17
CAPN1-212ENST00000527887 MUC3AQ02505 3323 aa16.1■□□□□ 0.17
CAPN1-212ENST00000527887 BDP1A6H8Y1 2624 aa16.09■□□□□ 0.17
CAPN1-212ENST00000527887 COL4A6Q14031 1691 aa16.09■□□□□ 0.17
CAPN1-212ENST00000527887 H3BNC9 293 aa16.09■□□□□ 0.17
CAPN1-212ENST00000527887 CPLX1O14810 134 aa16.09■□□□□ 0.17
CAPN1-212ENST00000527887 EIF5BO60841 1220 aaKnown RBP16.09■□□□□ 0.17
CAPN1-212ENST00000527887 PSAPP07602 524 aa16.09■□□□□ 0.17
CAPN1-212ENST00000527887 KLRC1P26715 233 aa16.09■□□□□ 0.17
CAPN1-212ENST00000527887 NLRP5P59047 1200 aa16.09■□□□□ 0.17
CAPN1-212ENST00000527887 TOB2Q14106 344 aaPredicted RBP16.09■□□□□ 0.17
CAPN1-212ENST00000527887 KRT40Q6A162 431 aa16.09■□□□□ 0.17
CAPN1-212ENST00000527887 SWSAP1Q6NVH7 229 aa16.09■□□□□ 0.17
CAPN1-212ENST00000527887 CCDC60Q8IWA6 550 aaPredicted RBP16.09■□□□□ 0.17
CAPN1-212ENST00000527887 ZNF710Q8N1W2 664 aa16.09■□□□□ 0.17
CAPN1-212ENST00000527887 FIBCD1Q8N539 461 aa16.09■□□□□ 0.17
CAPN1-212ENST00000527887 BBXQ8WY36 941 aaPredicted RBP16.09■□□□□ 0.17
CAPN1-212ENST00000527887 MRPL38Q96DV4 380 aaKnown RBP16.09■□□□□ 0.17
CAPN1-212ENST00000527887 CEP131Q9UPN4 1083 aa16.09■□□□□ 0.17
CAPN1-212ENST00000527887 PCDHA10Q9Y5I2 948 aa16.09■□□□□ 0.17
CAPN1-212ENST00000527887 PRRC2BQ5JSZ5 2229 aaKnown RBP16.09■□□□□ 0.17
CAPN1-212ENST00000527887 DDX39AO00148 427 aaKnown RBP16.08■□□□□ 0.16
CAPN1-212ENST00000527887 DEXIO95424 95 aa16.08■□□□□ 0.16
CAPN1-212ENST00000527887 PRR16Q569H4 304 aa16.08■□□□□ 0.16
CAPN1-212ENST00000527887 TMEM192Q8IY95 271 aa16.08■□□□□ 0.16
CAPN1-212ENST00000527887 RIT2Q99578 217 aa16.08■□□□□ 0.16
CAPN1-212ENST00000527887 AGO3Q9H9G7 860 aaKnown RBP16.08■□□□□ 0.16
CAPN1-212ENST00000527887 NCOA5Q9HCD5 579 aaKnown RBP16.08■□□□□ 0.16
CAPN1-212ENST00000527887 VPS54Q9P1Q0 977 aa16.08■□□□□ 0.16
CAPN1-212ENST00000527887 IGSF9BQ9UPX0 1349 aa16.08■□□□□ 0.16
CAPN1-212ENST00000527887 WDR64B1ANS9 1081 aa16.07■□□□□ 0.16
CAPN1-212ENST00000527887 C5orf67F2Z3F1 127 aa16.07■□□□□ 0.16
CAPN1-212ENST00000527887 MAGEB2O15479 319 aa16.07■□□□□ 0.16
CAPN1-212ENST00000527887 STAG3L1P0CL83 205 aa16.07■□□□□ 0.16
CAPN1-212ENST00000527887 CD52P31358 61 aa16.07■□□□□ 0.16
CAPN1-212ENST00000527887 TFF2Q03403 129 aa16.07■□□□□ 0.16
CAPN1-212ENST00000527887 PAK2Q13177 524 aa16.07■□□□□ 0.16
CAPN1-212ENST00000527887 TIGD5Q53EQ6 642 aa16.07■□□□□ 0.16
CAPN1-212ENST00000527887 CKAP2LQ8IYA6 745 aa16.07■□□□□ 0.16
CAPN1-212ENST00000527887 TRAPPC12Q8WVT3 735 aa16.07■□□□□ 0.16
CAPN1-212ENST00000527887 CLP1Q92989 425 aaKnown RBP16.07■□□□□ 0.16
CAPN1-212ENST00000527887 ZNF689Q96CS4 500 aaPredicted RBP16.07■□□□□ 0.16
CAPN1-212ENST00000527887 FAM167AQ96KS9 214 aa16.07■□□□□ 0.16
CAPN1-212ENST00000527887 PDRG1Q9NUG6 133 aa16.07■□□□□ 0.16
CAPN1-212ENST00000527887 PADI3Q9ULW8 664 aa16.07■□□□□ 0.16
CAPN1-212ENST00000527887 PCDHA4Q9UN74 947 aa16.07■□□□□ 0.16
CAPN1-212ENST00000527887 PTPRSQ13332 1948 aa16.06■□□□□ 0.16
CAPN1-212ENST00000527887 DOCK5Q9H7D0 1870 aa16.06■□□□□ 0.16
CAPN1-212ENST00000527887 ADGRA3Q8IWK6 1321 aa16.06■□□□□ 0.16
CAPN1-212ENST00000527887 CDKL5O76039 1030 aa16.06■□□□□ 0.16
CAPN1-212ENST00000527887 ATP4AP20648 1035 aa16.06■□□□□ 0.16
CAPN1-212ENST00000527887 SFNP31947 248 aa16.06■□□□□ 0.16
CAPN1-212ENST00000527887 BMPR1AP36894 532 aa16.06■□□□□ 0.16
CAPN1-212ENST00000527887 ANAPC15P60006 121 aa16.06■□□□□ 0.16
CAPN1-212ENST00000527887 GPM6BQ13491 265 aa16.06■□□□□ 0.16
CAPN1-212ENST00000527887 NPAS4Q8IUM7 802 aa16.06■□□□□ 0.16
CAPN1-212ENST00000527887 KIAA0319LQ8IZA0 1049 aa16.06■□□□□ 0.16
CAPN1-212ENST00000527887 DAGLBQ8NCG7 672 aa16.06■□□□□ 0.16
CAPN1-212ENST00000527887 RDM1Q8NG50 284 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms