RNA–Protein interactions for RNA: ENST00000527644.1

TSPAN4-217, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 968 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-217ENST00000527644 PPP4R3AQ6IN85 833 aa29.79■■■□□ 2.36
TSPAN4-217ENST00000527644 CCDC83Q8IWF9 413 aa29.79■■■□□ 2.36
TSPAN4-217ENST00000527644 DNAJB3Q8WWF6 145 aa29.79■■■□□ 2.36
TSPAN4-217ENST00000527644 CDX2Q99626 313 aaPredicted RBP29.79■■■□□ 2.36
TSPAN4-217ENST00000527644 NAP1L4Q99733 375 aaKnown RBP29.79■■■□□ 2.36
TSPAN4-217ENST00000527644 SH2B1Q9NRF2 756 aaPredicted RBP29.79■■■□□ 2.36
TSPAN4-217ENST00000527644 DISC1Q9NRI5 854 aa29.79■■■□□ 2.36
TSPAN4-217ENST00000527644 PSMD10O75832 226 aa29.78■■■□□ 2.36
TSPAN4-217ENST00000527644 GCFC2P16383 781 aaKnown RBP29.78■■■□□ 2.36
TSPAN4-217ENST00000527644 ATP4AP20648 1035 aa29.78■■■□□ 2.36
TSPAN4-217ENST00000527644 JAK3P52333 1124 aa29.78■■■□□ 2.36
TSPAN4-217ENST00000527644 CKAP2LQ8IYA6 745 aa29.78■■■□□ 2.36
TSPAN4-217ENST00000527644 IL27Q8NEV9 243 aa29.78■■■□□ 2.36
TSPAN4-217ENST00000527644 DBF4BQ8NFT6 615 aa29.78■■■□□ 2.36
TSPAN4-217ENST00000527644 ETNPPLQ8TBG4 499 aa29.78■■■□□ 2.36
TSPAN4-217ENST00000527644 GABBR1Q9UBS5 961 aa29.78■■■□□ 2.36
TSPAN4-217ENST00000527644 YBX2Q9Y2T7 364 aaKnown RBP29.78■■■□□ 2.36
TSPAN4-217ENST00000527644 COL1A2P08123 1366 aa29.77■■■□□ 2.36
TSPAN4-217ENST00000527644 CHRNA1P02708 482 aa29.77■■■□□ 2.36
TSPAN4-217ENST00000527644 MMP1P03956 469 aa29.77■■■□□ 2.36
TSPAN4-217ENST00000527644 ZNF484Q5JVG2 852 aa29.77■■■□□ 2.36
TSPAN4-217ENST00000527644 MTHFD1LQ6UB35 978 aa29.77■■■□□ 2.36
TSPAN4-217ENST00000527644 HERC6Q8IVU3 1022 aa29.77■■■□□ 2.36
TSPAN4-217ENST00000527644 TRAPPC12Q8WVT3 735 aa29.77■■■□□ 2.36
TSPAN4-217ENST00000527644 BBXQ8WY36 941 aaPredicted RBP29.77■■■□□ 2.36
TSPAN4-217ENST00000527644 SEPT8Q92599 483 aa29.77■■■□□ 2.36
TSPAN4-217ENST00000527644 GJA10Q969M2 543 aa29.77■■■□□ 2.36
TSPAN4-217ENST00000527644 NKX2-4Q9H2Z4 354 aa29.77■■■□□ 2.36
TSPAN4-217ENST00000527644 UNC45AQ9H3U1 944 aa29.77■■■□□ 2.36
TSPAN4-217ENST00000527644 SLC28A3Q9HAS3 691 aa29.77■■■□□ 2.36
TSPAN4-217ENST00000527644 MGAT3Q09327 533 aa29.76■■■□□ 2.35
TSPAN4-217ENST00000527644 NR5A1Q13285 461 aa29.76■■■□□ 2.35
TSPAN4-217ENST00000527644 KRT40Q6A162 431 aa29.76■■■□□ 2.35
TSPAN4-217ENST00000527644 RDM1Q8NG50 284 aa29.76■■■□□ 2.35
TSPAN4-217ENST00000527644 TNFRSF25Q93038 417 aa29.76■■■□□ 2.35
TSPAN4-217ENST00000527644 ZBTB10Q96DT7 871 aa29.76■■■□□ 2.35
TSPAN4-217ENST00000527644 IGSF9BQ9UPX0 1349 aa29.75■■■□□ 2.35
TSPAN4-217ENST00000527644 KIF28PB7ZC32 967 aa29.75■■■□□ 2.35
TSPAN4-217ENST00000527644 CHMP2AO43633 222 aa29.75■■■□□ 2.35
TSPAN4-217ENST00000527644 SLC37A4O43826 429 aa29.75■■■□□ 2.35
TSPAN4-217ENST00000527644 GRIN2CQ14957 1233 aa29.75■■■□□ 2.35
TSPAN4-217ENST00000527644 EARS2Q5JPH6 523 aaKnown RBP29.75■■■□□ 2.35
TSPAN4-217ENST00000527644 GBF1Q92538 1859 aa29.75■■■□□ 2.35
TSPAN4-217ENST00000527644 FAM49AQ9H0Q0 323 aaPredicted RBP29.75■■■□□ 2.35
TSPAN4-217ENST00000527644 MYH9P35579 1960 aaKnown RBP29.75■■■□□ 2.35
TSPAN4-217ENST00000527644 SMIM35A0A1B0GVV1 85 aa29.74■■■□□ 2.35
TSPAN4-217ENST00000527644 CCNT1O60563 726 aaKnown RBP29.74■■■□□ 2.35
TSPAN4-217ENST00000527644 MYOGP15173 224 aa29.74■■■□□ 2.35
TSPAN4-217ENST00000527644 KLRC1P26715 233 aa29.74■■■□□ 2.35
TSPAN4-217ENST00000527644 MRPS6P82932 125 aaKnown RBP29.74■■■□□ 2.35
TSPAN4-217ENST00000527644 IER5Q5VY09 327 aa29.74■■■□□ 2.35
TSPAN4-217ENST00000527644 B3GNT9Q6UX72 402 aa29.74■■■□□ 2.35
TSPAN4-217ENST00000527644 NME8Q8N427 588 aa29.74■■■□□ 2.35
TSPAN4-217ENST00000527644 APBB2Q92870 758 aa29.74■■■□□ 2.35
TSPAN4-217ENST00000527644 FAM167AQ96KS9 214 aa29.74■■■□□ 2.35
TSPAN4-217ENST00000527644 FAM20AQ96MK3 541 aa29.74■■■□□ 2.35
TSPAN4-217ENST00000527644 OSBPL7Q9BZF2 842 aa29.74■■■□□ 2.35
TSPAN4-217ENST00000527644 BTBD18B2RXH4 712 aa29.73■■■□□ 2.35
TSPAN4-217ENST00000527644 ST18O60284 1047 aa29.73■■■□□ 2.35
TSPAN4-217ENST00000527644 DEFB103AP81534 67 aa29.73■■■□□ 2.35
TSPAN4-217ENST00000527644 HMGN5P82970 282 aaKnown RBP29.73■■■□□ 2.35
TSPAN4-217ENST00000527644 MIER3Q7Z3K6 550 aa29.73■■■□□ 2.35
TSPAN4-217ENST00000527644 DIS3L2Q8IYB7 885 aaKnown RBP29.73■■■□□ 2.35
TSPAN4-217ENST00000527644 KCNMB3Q9NPA1 279 aa29.73■■■□□ 2.35
TSPAN4-217ENST00000527644 CEP131Q9UPN4 1083 aa29.73■■■□□ 2.35
TSPAN4-217ENST00000527644 CDY2AQ9Y6F7 541 aa29.73■■■□□ 2.35
TSPAN4-217ENST00000527644 ZBTB42B2RXF5 422 aa29.72■■■□□ 2.35
TSPAN4-217ENST00000527644 TBX3O15119 743 aa29.72■■■□□ 2.35
TSPAN4-217ENST00000527644 FOSBP53539 338 aa29.72■■■□□ 2.35
TSPAN4-217ENST00000527644 MKRN4PQ13434 485 aaPredicted RBP29.72■■■□□ 2.35
TSPAN4-217ENST00000527644 MYLIPQ8WY64 445 aa29.72■■■□□ 2.35
TSPAN4-217ENST00000527644 IFIH1Q9BYX4 1025 aaKnown RBP29.72■■■□□ 2.35
TSPAN4-217ENST00000527644 NRBP2Q9NSY0 501 aa29.72■■■□□ 2.35
TSPAN4-217ENST00000527644 FAM205CA6NFA0 338 aa29.71■■■□□ 2.35
TSPAN4-217ENST00000527644 M0QZ92 97 aa29.71■■■□□ 2.35
TSPAN4-217ENST00000527644 PPP2R2DQ66LE6 453 aa29.71■■■□□ 2.35
TSPAN4-217ENST00000527644 CDH23Q9H251 3354 aa29.71■■■□□ 2.35
TSPAN4-217ENST00000527644 TLL1O43897 1013 aa29.7■■■□□ 2.35
TSPAN4-217ENST00000527644 ZNF862O60290 1169 aa29.7■■■□□ 2.35
TSPAN4-217ENST00000527644 AMHP03971 560 aa29.7■■■□□ 2.35
TSPAN4-217ENST00000527644 GHRP10912 638 aa29.7■■■□□ 2.35
TSPAN4-217ENST00000527644 LPIN1Q14693 890 aa29.7■■■□□ 2.35
TSPAN4-217ENST00000527644 SAFBQ15424 915 aaKnown RBP eCLIP29.7■■■□□ 2.35
TSPAN4-217ENST00000527644 FBXO47Q5MNV8 452 aa29.7■■■□□ 2.35
TSPAN4-217ENST00000527644 LIN28BQ6ZN17 250 aaKnown RBP eCLIP29.7■■■□□ 2.35
TSPAN4-217ENST00000527644 TRMT1LQ7Z2T5 733 aaKnown RBP29.7■■■□□ 2.35
TSPAN4-217ENST00000527644 C8orf76Q96K31 380 aa29.7■■■□□ 2.35
TSPAN4-217ENST00000527644 ZBED2Q9BTP6 218 aa29.7■■■□□ 2.35
TSPAN4-217ENST00000527644 TRPV2Q9Y5S1 764 aa29.7■■■□□ 2.35
TSPAN4-217ENST00000527644 SQORQ9Y6N5 450 aa29.7■■■□□ 2.35
TSPAN4-217ENST00000527644 CHD9Q3L8U1 2897 aa29.69■■■□□ 2.34
TSPAN4-217ENST00000527644 RBAK-RBAKDNI3L0D1 243 aa29.69■■■□□ 2.34
TSPAN4-217ENST00000527644 OATP04181 439 aa29.69■■■□□ 2.34
TSPAN4-217ENST00000527644 CA3P07451 260 aa29.69■■■□□ 2.34
TSPAN4-217ENST00000527644 PRKCEQ02156 737 aa29.69■■■□□ 2.34
TSPAN4-217ENST00000527644 WDR81Q562E7 1941 aa29.69■■■□□ 2.34
TSPAN4-217ENST00000527644 COL6A3P12111 3177 aa29.68■■■□□ 2.34
TSPAN4-217ENST00000527644 MARCH6O60337 910 aa29.68■■■□□ 2.34
TSPAN4-217ENST00000527644 GJB5O95377 273 aa29.68■■■□□ 2.34
TSPAN4-217ENST00000527644 C22orf31O95567 290 aa29.68■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms