RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 NFRKBQ6P4R8 1299 aa12.1□□□□□ -0.47
NEDD8-205ENST00000527046 SHC4Q6S5L8 630 aa12.1□□□□□ -0.47
NEDD8-205ENST00000527046 ANKRD33Q7Z3H0 272 aa12.1□□□□□ -0.47
NEDD8-205ENST00000527046 KCNK18Q7Z418 384 aa12.1□□□□□ -0.47
NEDD8-205ENST00000527046 C4orf19Q8IY42 314 aa12.1□□□□□ -0.47
NEDD8-205ENST00000527046 ATP8B4Q8TF62 1192 aa12.1□□□□□ -0.47
NEDD8-205ENST00000527046 LEO1Q8WVC0 666 aaPredicted RBP12.1□□□□□ -0.47
NEDD8-205ENST00000527046 TRAPPC12Q8WVT3 735 aa12.1□□□□□ -0.47
NEDD8-205ENST00000527046 GLG1Q92896 1179 aa12.1□□□□□ -0.47
NEDD8-205ENST00000527046 TNPO1Q92973 898 aaKnown RBP12.1□□□□□ -0.47
NEDD8-205ENST00000527046 TRPV6Q9H1D0 765 aa12.1□□□□□ -0.47
NEDD8-205ENST00000527046 SETD4Q9NVD3 440 aa12.1□□□□□ -0.47
NEDD8-205ENST00000527046 ERAP1Q9NZ08 941 aa12.1□□□□□ -0.47
NEDD8-205ENST00000527046 LRWD1Q9UFC0 647 aa12.1□□□□□ -0.47
NEDD8-205ENST00000527046 GTF2IRD1Q9UHL9 959 aa12.1□□□□□ -0.47
NEDD8-205ENST00000527046 A0A087X0B3 334 aa12.09□□□□□ -0.47
NEDD8-205ENST00000527046 A0A0U1RQG5 324 aaPredicted RBP12.09□□□□□ -0.47
NEDD8-205ENST00000527046 POTEB3A0JP26 581 aa12.09□□□□□ -0.47
NEDD8-205ENST00000527046 MBLAC1A4D2B0 266 aaPredicted RBP12.09□□□□□ -0.47
NEDD8-205ENST00000527046 B4GALT4O60513 344 aa12.09□□□□□ -0.47
NEDD8-205ENST00000527046 SLC26A2P50443 739 aa12.09□□□□□ -0.47
NEDD8-205ENST00000527046 PTPN11Q06124 597 aaPredicted RBP12.09□□□□□ -0.47
NEDD8-205ENST00000527046 FAAP100Q0VG06 881 aa12.09□□□□□ -0.47
NEDD8-205ENST00000527046 MKRN4PQ13434 485 aaPredicted RBP12.09□□□□□ -0.47
NEDD8-205ENST00000527046 TRIM71Q2Q1W2 868 aaKnown RBP12.09□□□□□ -0.47
NEDD8-205ENST00000527046 TRIM60Q495X7 471 aa12.09□□□□□ -0.47
NEDD8-205ENST00000527046 PDXDC2PQ6P474 469 aa12.09□□□□□ -0.47
NEDD8-205ENST00000527046 POTEBQ6S5H4 581 aa12.09□□□□□ -0.47
NEDD8-205ENST00000527046 CLEC17AQ6ZS10 378 aa12.09□□□□□ -0.47
NEDD8-205ENST00000527046 SH3RF1Q7Z6J0 888 aa12.09□□□□□ -0.47
NEDD8-205ENST00000527046 TPH2Q8IWU9 490 aa12.09□□□□□ -0.47
NEDD8-205ENST00000527046 DHX38Q92620 1227 aaKnown RBP12.09□□□□□ -0.47
NEDD8-205ENST00000527046 TOX2Q96NM4 488 aa12.09□□□□□ -0.47
NEDD8-205ENST00000527046 SH2D3AQ9BRG2 576 aa12.09□□□□□ -0.47
NEDD8-205ENST00000527046 LXNQ9BS40 222 aa12.09□□□□□ -0.47
NEDD8-205ENST00000527046 CCSER1Q9C0I3 900 aa12.09□□□□□ -0.47
NEDD8-205ENST00000527046 GDPD2Q9HCC8 539 aa12.09□□□□□ -0.47
NEDD8-205ENST00000527046 PDLIM7Q9NR12 457 aa12.09□□□□□ -0.47
NEDD8-205ENST00000527046 TRMT13Q9NUP7 481 aaKnown RBP12.09□□□□□ -0.47
NEDD8-205ENST00000527046 CEP131Q9UPN4 1083 aa12.09□□□□□ -0.47
NEDD8-205ENST00000527046 SAMM50Q9Y512 469 aa12.09□□□□□ -0.47
NEDD8-205ENST00000527046 IGKV6-21A0A0C4DH24 114 aa12.08□□□□□ -0.48
NEDD8-205ENST00000527046 BACH1O14867 736 aa12.08□□□□□ -0.48
NEDD8-205ENST00000527046 TREHO43280 583 aa12.08□□□□□ -0.48
NEDD8-205ENST00000527046 OATP04181 439 aa12.08□□□□□ -0.48
NEDD8-205ENST00000527046 ITGB8P26012 769 aa12.08□□□□□ -0.48
NEDD8-205ENST00000527046 LONP1P36776 959 aaKnown RBP12.08□□□□□ -0.48
NEDD8-205ENST00000527046 NPEPPSP55786 919 aa12.08□□□□□ -0.48
NEDD8-205ENST00000527046 RTP1P59025 263 aa12.08□□□□□ -0.48
NEDD8-205ENST00000527046 PRKCEQ02156 737 aa12.08□□□□□ -0.48
NEDD8-205ENST00000527046 GPNMBQ14956 572 aa12.08□□□□□ -0.48
NEDD8-205ENST00000527046 STK38Q15208 465 aa12.08□□□□□ -0.48
NEDD8-205ENST00000527046 TMEM119Q4V9L6 283 aa12.08□□□□□ -0.48
NEDD8-205ENST00000527046 NAALADL2Q58DX5 795 aa12.08□□□□□ -0.48
NEDD8-205ENST00000527046 XKR3Q5GH77 459 aa12.08□□□□□ -0.48
NEDD8-205ENST00000527046 FAM160B1Q5W0V3 765 aa12.08□□□□□ -0.48
NEDD8-205ENST00000527046 TRAF7Q6Q0C0 670 aa12.08□□□□□ -0.48
NEDD8-205ENST00000527046 TRMT1LQ7Z2T5 733 aaKnown RBP12.08□□□□□ -0.48
NEDD8-205ENST00000527046 LINC01465Q8N7H1 131 aa12.08□□□□□ -0.48
NEDD8-205ENST00000527046 LMBR1Q8WVP7 490 aa12.08□□□□□ -0.48
NEDD8-205ENST00000527046 BBXQ8WY36 941 aaPredicted RBP12.08□□□□□ -0.48
NEDD8-205ENST00000527046 VWCEQ96DN2 955 aa12.08□□□□□ -0.48
NEDD8-205ENST00000527046 AZI2Q9H6S1 392 aa12.08□□□□□ -0.48
NEDD8-205ENST00000527046 ZSWIM4Q9H7M6 989 aa12.08□□□□□ -0.48
NEDD8-205ENST00000527046 TUFT1Q9NNX1 390 aa12.08□□□□□ -0.48
NEDD8-205ENST00000527046 CFAP45Q9UL16 551 aa12.08□□□□□ -0.48
NEDD8-205ENST00000527046 KAT6AQ92794 2004 aa12.08□□□□□ -0.48
NEDD8-205ENST00000527046 HBP1O60381 514 aa12.07□□□□□ -0.48
NEDD8-205ENST00000527046 C22orf31O95567 290 aa12.07□□□□□ -0.48
NEDD8-205ENST00000527046 XRCC6P12956 609 aaKnown RBP eCLIP12.07□□□□□ -0.48
NEDD8-205ENST00000527046 MUTP22033 750 aa12.07□□□□□ -0.48
NEDD8-205ENST00000527046 KRT85P78386 507 aa12.07□□□□□ -0.48
NEDD8-205ENST00000527046 GRIK4Q16099 956 aa12.07□□□□□ -0.48
NEDD8-205ENST00000527046 TMEM266Q2M3C6 531 aa12.07□□□□□ -0.48
NEDD8-205ENST00000527046 PLA2G4FQ68DD2 849 aa12.07□□□□□ -0.48
NEDD8-205ENST00000527046 POTEGQ6S5H5 508 aa12.07□□□□□ -0.48
NEDD8-205ENST00000527046 RUFY4Q6ZNE9 571 aa12.07□□□□□ -0.48
NEDD8-205ENST00000527046 KRI1Q8N9T8 703 aaKnown RBP12.07□□□□□ -0.48
NEDD8-205ENST00000527046 NEK9Q8TD19 979 aa12.07□□□□□ -0.48
NEDD8-205ENST00000527046 PIGOQ8TEQ8 1089 aa12.07□□□□□ -0.48
NEDD8-205ENST00000527046 SYMPKQ92797 1274 aaKnown RBP12.07□□□□□ -0.48
NEDD8-205ENST00000527046 EVPLQ92817 2033 aa12.07□□□□□ -0.48
NEDD8-205ENST00000527046 VTI1AQ96AJ9 217 aa12.07□□□□□ -0.48
NEDD8-205ENST00000527046 AK8Q96MA6 479 aa12.07□□□□□ -0.48
NEDD8-205ENST00000527046 PLIN2Q99541 437 aa12.07□□□□□ -0.48
NEDD8-205ENST00000527046 KATNAL1Q9BW62 490 aa12.07□□□□□ -0.48
NEDD8-205ENST00000527046 OSBPL7Q9BZF2 842 aa12.07□□□□□ -0.48
NEDD8-205ENST00000527046 BLOC1S4Q9NUP1 217 aa12.07□□□□□ -0.48
NEDD8-205ENST00000527046 NRCAMQ92823 1304 aa12.07□□□□□ -0.48
NEDD8-205ENST00000527046 MKI67P46013 3256 aaKnown RBP12.06□□□□□ -0.48
NEDD8-205ENST00000527046 TRIM43BA6NCK2 446 aa12.06□□□□□ -0.48
NEDD8-205ENST00000527046 DDX11L8A8MPP1 907 aa12.06□□□□□ -0.48
NEDD8-205ENST00000527046 E9PMD0 336 aa12.06□□□□□ -0.48
NEDD8-205ENST00000527046 CUTAO60888 179 aa12.06□□□□□ -0.48
NEDD8-205ENST00000527046 CYP2C9P11712 490 aa12.06□□□□□ -0.48
NEDD8-205ENST00000527046 KLRC1P26715 233 aa12.06□□□□□ -0.48
NEDD8-205ENST00000527046 YWHABP31946 246 aaKnown RBP12.06□□□□□ -0.48
NEDD8-205ENST00000527046 CCT6AP40227 531 aaKnown RBP12.06□□□□□ -0.48
NEDD8-205ENST00000527046 RARRES1P49788 294 aa12.06□□□□□ -0.48
NEDD8-205ENST00000527046 CHMP4BP1P59074 171 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms