RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 DYDC2Q96IM9 177 aa19.32■□□□□ 0.68
USH1C-205ENST00000527020 PKNOX2Q96KN3 472 aa19.32■□□□□ 0.68
USH1C-205ENST00000527020 NOX5Q96PH1 765 aa19.32■□□□□ 0.68
USH1C-205ENST00000527020 PSMB7Q99436 277 aa19.32■□□□□ 0.68
USH1C-205ENST00000527020 PLCB1Q9NQ66 1216 aa19.32■□□□□ 0.68
USH1C-205ENST00000527020 OLFML3Q9NRN5 406 aa19.32■□□□□ 0.68
USH1C-205ENST00000527020 SMARCAL1Q9NZC9 954 aa19.32■□□□□ 0.68
USH1C-205ENST00000527020 EHD2Q9NZN4 543 aa19.32■□□□□ 0.68
USH1C-205ENST00000527020 ERICH4A6NGS2 130 aa19.31■□□□□ 0.68
USH1C-205ENST00000527020 ZBTB39O15060 712 aa19.31■□□□□ 0.68
USH1C-205ENST00000527020 EIF3JO75822 258 aaKnown RBP19.31■□□□□ 0.68
USH1C-205ENST00000527020 RAD17O75943 681 aa19.31■□□□□ 0.68
USH1C-205ENST00000527020 AFPP02771 609 aaKnown RBP19.31■□□□□ 0.68
USH1C-205ENST00000527020 UBXN2AP68543 259 aa19.31■□□□□ 0.68
USH1C-205ENST00000527020 PPP2R5CQ13362 524 aa19.31■□□□□ 0.68
USH1C-205ENST00000527020 EZH2Q15910 746 aaKnown RBP19.31■□□□□ 0.68
USH1C-205ENST00000527020 LRCH2Q5VUJ6 765 aa19.31■□□□□ 0.68
USH1C-205ENST00000527020 C1orf186Q6ZWK4 172 aa19.31■□□□□ 0.68
USH1C-205ENST00000527020 TEX2Q8IWB9 1127 aa19.31■□□□□ 0.68
USH1C-205ENST00000527020 SPATA4Q8NEY3 305 aa19.31■□□□□ 0.68
USH1C-205ENST00000527020 TUFT1Q9NNX1 390 aa19.31■□□□□ 0.68
USH1C-205ENST00000527020 ADAM21Q9UKJ8 722 aa19.31■□□□□ 0.68
USH1C-205ENST00000527020 ZMYM2Q9UBW7 1377 aa19.31■□□□□ 0.68
USH1C-205ENST00000527020 SFI1A8K8P3 1242 aa19.3■□□□□ 0.68
USH1C-205ENST00000527020 GCOM1H8Y6P7 765 aaPredicted RBP19.3■□□□□ 0.68
USH1C-205ENST00000527020 TGFB1I1O43294 461 aa19.3■□□□□ 0.68
USH1C-205ENST00000527020 TBCAO75347 108 aaKnown RBP19.3■□□□□ 0.68
USH1C-205ENST00000527020 GCNT3O95395 438 aa19.3■□□□□ 0.68
USH1C-205ENST00000527020 VIL1P09327 827 aaKnown RBP19.3■□□□□ 0.68
USH1C-205ENST00000527020 POLR2MP0CAP2 368 aa19.3■□□□□ 0.68
USH1C-205ENST00000527020 PON1P27169 355 aa19.3■□□□□ 0.68
USH1C-205ENST00000527020 KLHL30Q0D2K2 578 aa19.3■□□□□ 0.68
USH1C-205ENST00000527020 EPHA7Q15375 998 aa19.3■□□□□ 0.68
USH1C-205ENST00000527020 NAB2Q15742 525 aa19.3■□□□□ 0.68
USH1C-205ENST00000527020 ASIC2Q16515 512 aa19.3■□□□□ 0.68
USH1C-205ENST00000527020 IQCEQ6IPM2 695 aa19.3■□□□□ 0.68
USH1C-205ENST00000527020 CCNI2Q6ZMN8 369 aaPredicted RBP19.3■□□□□ 0.68
USH1C-205ENST00000527020 IRF2BP2Q7Z5L9 587 aa19.3■□□□□ 0.68
USH1C-205ENST00000527020 GSPT2Q8IYD1 628 aaKnown RBP19.3■□□□□ 0.68
USH1C-205ENST00000527020 TXLNBQ8N3L3 684 aa19.3■□□□□ 0.68
USH1C-205ENST00000527020 KCTD17Q8N5Z5 321 aa19.3■□□□□ 0.68
USH1C-205ENST00000527020 IKZF4Q9H2S9 585 aa19.3■□□□□ 0.68
USH1C-205ENST00000527020 ZC3H4Q9UPT8 1303 aaKnown RBP19.3■□□□□ 0.68
USH1C-205ENST00000527020 UCHL3P15374 230 aa19.3■□□□□ 0.68
USH1C-205ENST00000527020 KLRC1P26715 233 aa19.3■□□□□ 0.68
USH1C-205ENST00000527020 GPS2Q13227 327 aa19.3■□□□□ 0.68
USH1C-205ENST00000527020 SLC15A2Q16348 729 aa19.3■□□□□ 0.68
USH1C-205ENST00000527020 SPDYE2Q495Y8 402 aa19.3■□□□□ 0.68
USH1C-205ENST00000527020 TPH2Q8IWU9 490 aa19.3■□□□□ 0.68
USH1C-205ENST00000527020 HDAC7Q8WUI4 952 aa19.3■□□□□ 0.68
USH1C-205ENST00000527020 PACSIN1Q9BY11 444 aa19.3■□□□□ 0.68
USH1C-205ENST00000527020 CLIC2O15247 247 aa19.29■□□□□ 0.68
USH1C-205ENST00000527020 SLC16A3O15427 465 aaKnown RBP19.29■□□□□ 0.68
USH1C-205ENST00000527020 CHMP2AO43633 222 aa19.29■□□□□ 0.68
USH1C-205ENST00000527020 XRCC5P13010 732 aaKnown RBP19.29■□□□□ 0.68
USH1C-205ENST00000527020 TRAF1Q13077 416 aa19.29■□□□□ 0.68
USH1C-205ENST00000527020 DLGAP5Q15398 846 aa19.29■□□□□ 0.68
USH1C-205ENST00000527020 ZNF772Q68DY9 489 aaPredicted RBP19.29■□□□□ 0.68
USH1C-205ENST00000527020 SLC35C1Q96A29 364 aa19.29■□□□□ 0.68
USH1C-205ENST00000527020 BORCS6Q96GS4 357 aa19.29■□□□□ 0.68
USH1C-205ENST00000527020 ZFP91Q96JP5 570 aaPredicted RBP19.29■□□□□ 0.68
USH1C-205ENST00000527020 LRRC1Q9BTT6 524 aa19.29■□□□□ 0.68
USH1C-205ENST00000527020 VCPKMTQ9H867 229 aa19.29■□□□□ 0.68
USH1C-205ENST00000527020 VIPAS39Q9H9C1 493 aa19.29■□□□□ 0.68
USH1C-205ENST00000527020 SIX2Q9NPC8 291 aa19.29■□□□□ 0.68
USH1C-205ENST00000527020 WRAP73Q9P2S5 460 aaPredicted RBP19.29■□□□□ 0.68
USH1C-205ENST00000527020 ADAMTS1Q9UHI8 967 aa19.29■□□□□ 0.68
USH1C-205ENST00000527020 AJAP1Q9UKB5 411 aaPredicted RBP19.29■□□□□ 0.68
USH1C-205ENST00000527020 LOXHD1Q8IVV2 1947 aa19.29■□□□□ 0.68
USH1C-205ENST00000527020 GAP43P17677 238 aa19.29■□□□□ 0.68
USH1C-205ENST00000527020 ZYXQ15942 572 aaKnown RBP19.29■□□□□ 0.68
USH1C-205ENST00000527020 ENOX2Q16206 610 aaKnown RBP19.29■□□□□ 0.68
USH1C-205ENST00000527020 MAP9Q49MG5 647 aa19.29■□□□□ 0.68
USH1C-205ENST00000527020 FIZ1Q96SL8 496 aa19.29■□□□□ 0.68
USH1C-205ENST00000527020 GLIS2Q9BZE0 524 aaPredicted RBP19.29■□□□□ 0.68
USH1C-205ENST00000527020 HPCAL4Q9UM19 191 aa19.29■□□□□ 0.68
USH1C-205ENST00000527020 ZBTB12Q9Y330 459 aaPredicted RBP19.29■□□□□ 0.68
USH1C-205ENST00000527020 PALMO75781 387 aa19.28■□□□□ 0.68
USH1C-205ENST00000527020 NMT1P30419 496 aaKnown RBP19.28■□□□□ 0.68
USH1C-205ENST00000527020 PRELPP51888 382 aa19.28■□□□□ 0.68
USH1C-205ENST00000527020 PTK2Q05397 1052 aa19.28■□□□□ 0.68
USH1C-205ENST00000527020 EXOC3L4Q17RC7 722 aa19.28■□□□□ 0.68
USH1C-205ENST00000527020 DCAF17Q5H9S7 520 aaPredicted RBP19.28■□□□□ 0.68
USH1C-205ENST00000527020 ZNF571Q7Z3V5 609 aaPredicted RBP19.28■□□□□ 0.68
USH1C-205ENST00000527020 RBM46Q8TBY0 533 aaKnown RBP19.28■□□□□ 0.68
USH1C-205ENST00000527020 CHURC1Q8WUH1 139 aa19.28■□□□□ 0.68
USH1C-205ENST00000527020 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.28■□□□□ 0.68
USH1C-205ENST00000527020 TMEM39BQ9GZU3 492 aa19.28■□□□□ 0.68
USH1C-205ENST00000527020 FBXO28Q9NVF7 368 aa19.28■□□□□ 0.68
USH1C-205ENST00000527020 VPS18Q9P253 973 aa19.28■□□□□ 0.68
USH1C-205ENST00000527020 DMGDHQ9UI17 866 aaKnown RBP19.28■□□□□ 0.68
USH1C-205ENST00000527020 FAN1Q9Y2M0 1017 aa19.28■□□□□ 0.68
USH1C-205ENST00000527020 PCDHGC5Q9Y5F6 944 aa19.28■□□□□ 0.68
USH1C-205ENST00000527020 EIF3DO15371 548 aaKnown RBP eCLIP19.27■□□□□ 0.68
USH1C-205ENST00000527020 PLA2G6O60733 806 aa19.27■□□□□ 0.68
USH1C-205ENST00000527020 ARP10275 920 aa19.27■□□□□ 0.68
USH1C-205ENST00000527020 AARSP49588 968 aaKnown RBP eCLIP19.27■□□□□ 0.68
USH1C-205ENST00000527020 CEP55Q53EZ4 464 aa19.27■□□□□ 0.68
USH1C-205ENST00000527020 B3GNT9Q6UX72 402 aa19.27■□□□□ 0.68
USH1C-205ENST00000527020 EXOC4Q96A65 974 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms