RNA–Protein interactions for RNA: ENST00000526258.5

KDM2A-207, Transcript of lysine demethylase 2A, humanhuman

TSL 1 (best)

Gene KDM2A, Length 5,671 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2A-207ENST00000526258 L1RE1Q9UN81 338 aa13.92□□□□□ -0.18
KDM2A-207ENST00000526258 WASLO00401 505 aaPredicted RBP13.91□□□□□ -0.18
KDM2A-207ENST00000526258 SEC24DO94855 1032 aaPredicted RBP13.91□□□□□ -0.18
KDM2A-207ENST00000526258 KITP10721 976 aa13.91□□□□□ -0.18
KDM2A-207ENST00000526258 BBS9Q3SYG4 887 aa13.91□□□□□ -0.18
KDM2A-207ENST00000526258 SSH3Q8TE77 659 aa13.91□□□□□ -0.18
KDM2A-207ENST00000526258 DDX17Q92841 729 aaKnown RBP13.91□□□□□ -0.18
KDM2A-207ENST00000526258 MTBPQ96DY7 904 aa13.91□□□□□ -0.18
KDM2A-207ENST00000526258 GOLPH3LQ9H4A5 285 aa13.91□□□□□ -0.18
KDM2A-207ENST00000526258 PNMA2Q9UL42 364 aa13.91□□□□□ -0.18
KDM2A-207ENST00000526258 XPO1O14980 1071 aaKnown RBP13.91□□□□□ -0.18
KDM2A-207ENST00000526258 PFDN6O15212 129 aa13.91□□□□□ -0.18
KDM2A-207ENST00000526258 MAPK4P31152 587 aa13.91□□□□□ -0.18
KDM2A-207ENST00000526258 BLVRAP53004 296 aa13.91□□□□□ -0.18
KDM2A-207ENST00000526258 CACNA2D1P54289 1103 aa13.91□□□□□ -0.18
KDM2A-207ENST00000526258 TPH2Q8IWU9 490 aa13.91□□□□□ -0.18
KDM2A-207ENST00000526258 NOA1Q8NC60 698 aaKnown RBP13.91□□□□□ -0.18
KDM2A-207ENST00000526258 SLITRK6Q9H5Y7 841 aa13.91□□□□□ -0.18
KDM2A-207ENST00000526258 GINM1Q9NU53 330 aa13.91□□□□□ -0.18
KDM2A-207ENST00000526258 KDM3AQ9Y4C1 1321 aa13.91□□□□□ -0.18
KDM2A-207ENST00000526258 CCNE1P24864 410 aa13.91□□□□□ -0.18
KDM2A-207ENST00000526258 TECP42680 631 aa13.91□□□□□ -0.18
KDM2A-207ENST00000526258 DEFA1P59665 94 aa13.91□□□□□ -0.18
KDM2A-207ENST00000526258 DEFA3P59666 94 aa13.91□□□□□ -0.18
KDM2A-207ENST00000526258 R3HDM1Q15032 1099 aaKnown RBP13.91□□□□□ -0.18
KDM2A-207ENST00000526258 CDAN1Q8IWY9 1227 aa13.91□□□□□ -0.18
KDM2A-207ENST00000526258 FOXP1Q9H334 677 aaPredicted RBP13.91□□□□□ -0.18
KDM2A-207ENST00000526258 NDST4Q9H3R1 872 aa13.91□□□□□ -0.18
KDM2A-207ENST00000526258 SNX12Q9UMY4 172 aa13.91□□□□□ -0.18
KDM2A-207ENST00000526258 KRT37O76014 449 aa13.91□□□□□ -0.18
KDM2A-207ENST00000526258 HORMAD1Q86X24 394 aa13.91□□□□□ -0.18
KDM2A-207ENST00000526258 FMR1NBQ8N0W7 255 aaPredicted RBP13.91□□□□□ -0.18
KDM2A-207ENST00000526258 DDI1Q8WTU0 396 aa13.91□□□□□ -0.18
KDM2A-207ENST00000526258 COPG1Q9Y678 874 aaKnown RBP13.91□□□□□ -0.18
KDM2A-207ENST00000526258 CAPN1P07384 714 aa13.9□□□□□ -0.18
KDM2A-207ENST00000526258 TSTA3Q13630 321 aaPredicted RBP13.9□□□□□ -0.18
KDM2A-207ENST00000526258 EIF4A2Q14240 407 aaKnown RBP13.9□□□□□ -0.18
KDM2A-207ENST00000526258 C4orf50Q6ZRC1 276 aa13.9□□□□□ -0.18
KDM2A-207ENST00000526258 FAM43BQ6ZT52 329 aaPredicted RBP13.9□□□□□ -0.18
KDM2A-207ENST00000526258 REXO1Q8N1G1 1221 aaKnown RBP13.9□□□□□ -0.18
KDM2A-207ENST00000526258 CMTR1Q8N1G2 835 aaKnown RBP13.9□□□□□ -0.18
KDM2A-207ENST00000526258 WDR60Q8WVS4 1066 aa13.9□□□□□ -0.18
KDM2A-207ENST00000526258 CAB39Q9Y376 341 aaPredicted RBP13.9□□□□□ -0.18
KDM2A-207ENST00000526258 RIMS2Q9UQ26 1411 aa13.9□□□□□ -0.18
KDM2A-207ENST00000526258 KDSRQ06136 332 aa13.9□□□□□ -0.18
KDM2A-207ENST00000526258 RCN1Q15293 331 aa13.9□□□□□ -0.18
KDM2A-207ENST00000526258 PIGOQ8TEQ8 1089 aa13.9□□□□□ -0.18
KDM2A-207ENST00000526258 PNKPQ96T60 521 aa13.9□□□□□ -0.18
KDM2A-207ENST00000526258 PKD2L2Q9NZM6 624 aa13.9□□□□□ -0.18
KDM2A-207ENST00000526258 HSPA4LO95757 839 aa13.9□□□□□ -0.18
KDM2A-207ENST00000526258 SERPINB8P50452 374 aa13.9□□□□□ -0.18
KDM2A-207ENST00000526258 YARSP54577 528 aaKnown RBP13.9□□□□□ -0.18
KDM2A-207ENST00000526258 FOXR1Q6PIV2 292 aa13.9□□□□□ -0.18
KDM2A-207ENST00000526258 BLIDQ8IZY5 108 aa13.9□□□□□ -0.18
KDM2A-207ENST00000526258 PDIK1LQ8N165 341 aa13.9□□□□□ -0.18
KDM2A-207ENST00000526258 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.9□□□□□ -0.188e-7■■□□□ 13.4
KDM2A-207ENST00000526258 C14orf93Q9H972 538 aaKnown RBP13.9□□□□□ -0.18
KDM2A-207ENST00000526258 TUBA8Q9NY65 449 aaPredicted RBP13.9□□□□□ -0.18
KDM2A-207ENST00000526258 IPO11Q9UI26 975 aaKnown RBP13.9□□□□□ -0.18
KDM2A-207ENST00000526258 COL17A1Q9UMD9 1497 aaPredicted RBP13.9□□□□□ -0.18
KDM2A-207ENST00000526258 LGALS16A8MUM7 142 aa13.9□□□□□ -0.18
KDM2A-207ENST00000526258 EYA2O00167 538 aa13.9□□□□□ -0.18
KDM2A-207ENST00000526258 ZNF185O15231 689 aa13.9□□□□□ -0.18
KDM2A-207ENST00000526258 ADARP55265 1226 aaKnown RBP13.9□□□□□ -0.18
KDM2A-207ENST00000526258 CATSPER3Q86XQ3 398 aa13.9□□□□□ -0.18
KDM2A-207ENST00000526258 AFPP02771 609 aaKnown RBP13.9□□□□□ -0.18
KDM2A-207ENST00000526258 P4HA1P13674 534 aa13.9□□□□□ -0.18
KDM2A-207ENST00000526258 PRAMEP78395 509 aa13.9□□□□□ -0.18
KDM2A-207ENST00000526258 FKBP3Q00688 224 aaKnown RBP13.9□□□□□ -0.18
KDM2A-207ENST00000526258 NLRP3Q96P20 1036 aa13.9□□□□□ -0.18
KDM2A-207ENST00000526258 KDM4CQ9H3R0 1056 aa13.9□□□□□ -0.18
KDM2A-207ENST00000526258 MID2Q9UJV3 735 aa13.9□□□□□ -0.18
KDM2A-207ENST00000526258 SYNGAP1Q96PV0 1343 aa13.89□□□□□ -0.19
KDM2A-207ENST00000526258 OR52Z1P0C646 297 aa13.89□□□□□ -0.19
KDM2A-207ENST00000526258 CAV1Q03135 178 aa13.89□□□□□ -0.19
KDM2A-207ENST00000526258 CC2D2BQ6DHV5 1058 aa13.89□□□□□ -0.19
KDM2A-207ENST00000526258 DDX42Q86XP3 938 aaKnown RBP eCLIP13.89□□□□□ -0.19
KDM2A-207ENST00000526258 WWP1Q9H0M0 922 aa13.89□□□□□ -0.19
KDM2A-207ENST00000526258 ZNF277Q9NRM2 450 aaPredicted RBP13.89□□□□□ -0.19
KDM2A-207ENST00000526258 FAM187AA6NFU0 413 aa13.89□□□□□ -0.19
KDM2A-207ENST00000526258 TEX33O43247 280 aa13.89□□□□□ -0.19
KDM2A-207ENST00000526258 TAF5LO75529 589 aa13.89□□□□□ -0.19
KDM2A-207ENST00000526258 SASH1O94885 1247 aa13.89□□□□□ -0.19
KDM2A-207ENST00000526258 ENO1P06733 434 aaKnown RBP13.89□□□□□ -0.19
KDM2A-207ENST00000526258 ATP6V1E1P36543 226 aa13.89□□□□□ -0.19
KDM2A-207ENST00000526258 SIX5Q8N196 739 aa13.89□□□□□ -0.19
KDM2A-207ENST00000526258 PAGE5Q96GU1 130 aa13.89□□□□□ -0.19
KDM2A-207ENST00000526258 UHRF1BP1Q6BDS2 1440 aa13.89□□□□□ -0.19
KDM2A-207ENST00000526258 CAPN9O14815 690 aa13.89□□□□□ -0.19
KDM2A-207ENST00000526258 HSPD1P10809 573 aaKnown RBP13.89□□□□□ -0.19
KDM2A-207ENST00000526258 MYCLP12524 364 aaPredicted RBP13.89□□□□□ -0.19
KDM2A-207ENST00000526258 POLR2BP30876 1174 aaKnown RBP13.89□□□□□ -0.19
KDM2A-207ENST00000526258 ICA1Q05084 483 aa13.89□□□□□ -0.19
KDM2A-207ENST00000526258 UBE3AQ05086 875 aa13.89□□□□□ -0.19
KDM2A-207ENST00000526258 TRIM67Q6ZTA4 783 aa13.89□□□□□ -0.19
KDM2A-207ENST00000526258 NEK8Q86SG6 692 aa13.89□□□□□ -0.19
KDM2A-207ENST00000526258 JDP2Q8WYK2 163 aa13.89□□□□□ -0.19
KDM2A-207ENST00000526258 NCLNQ969V3 563 aa13.89□□□□□ -0.19
KDM2A-207ENST00000526258 BRD8Q9H0E9 1235 aa13.89□□□□□ -0.19
KDM2A-207ENST00000526258 DIABLOQ9NR28 239 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms