RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 FOXB2Q5VYV0 432 aa5.95□□□□□ -1.46
USP48-211ENST00000526044 STYK1Q6J9G0 422 aa5.95□□□□□ -1.46
USP48-211ENST00000526044 KRT28Q7Z3Y7 464 aa5.95□□□□□ -1.46
USP48-211ENST00000526044 NLRP10Q86W26 655 aa5.95□□□□□ -1.46
USP48-211ENST00000526044 DCP2Q8IU60 420 aaKnown RBP5.95□□□□□ -1.46
USP48-211ENST00000526044 THAP3Q8WTV1 239 aaPredicted RBP5.95□□□□□ -1.46
USP48-211ENST00000526044 MZB1Q8WU39 189 aa5.95□□□□□ -1.46
USP48-211ENST00000526044 TSPAN17Q96FV3 270 aa5.95□□□□□ -1.46
USP48-211ENST00000526044 DHRS4Q9BTZ2 278 aa5.95□□□□□ -1.46
USP48-211ENST00000526044 AP5M1Q9H0R1 490 aa5.95□□□□□ -1.46
USP48-211ENST00000526044 CLDND1Q9NY35 253 aa5.95□□□□□ -1.46
USP48-211ENST00000526044 COA3Q9Y2R0 106 aaPredicted RBP5.95□□□□□ -1.46
USP48-211ENST00000526044 KNSTRNQ9Y448 316 aa5.95□□□□□ -1.46
USP48-211ENST00000526044 USP32Q8NFA0 1604 aa5.95□□□□□ -1.46
USP48-211ENST00000526044 C1orf167Q5SNV9 1468 aa5.95□□□□□ -1.46
USP48-211ENST00000526044 IRS2Q9Y4H2 1338 aa5.95□□□□□ -1.46
USP48-211ENST00000526044 KTN1Q86UP2 1357 aaKnown RBP5.94□□□□□ -1.46
USP48-211ENST00000526044 MST1RQ04912 1400 aa5.94□□□□□ -1.46
USP48-211ENST00000526044 MSCO60682 206 aa5.94□□□□□ -1.46
USP48-211ENST00000526044 HMGB1P09429 215 aaKnown RBP5.94□□□□□ -1.46
USP48-211ENST00000526044 SLC6A11P48066 632 aa5.94□□□□□ -1.46
USP48-211ENST00000526044 EPHB3P54753 998 aa5.94□□□□□ -1.46
USP48-211ENST00000526044 CNGB1Q14028 1251 aaPredicted RBP5.94□□□□□ -1.46
USP48-211ENST00000526044 TARBP2Q15633 366 aaKnown RBP5.94□□□□□ -1.46
USP48-211ENST00000526044 KCNT2Q6UVM3 1135 aa5.94□□□□□ -1.46
USP48-211ENST00000526044 DBX2Q6ZNG2 339 aa5.94□□□□□ -1.46
USP48-211ENST00000526044 BRINP3Q76B58 766 aa5.94□□□□□ -1.46
USP48-211ENST00000526044 IFNL3Q8IZI9 196 aa5.94□□□□□ -1.46
USP48-211ENST00000526044 JMYQ8N9B5 988 aa5.94□□□□□ -1.46
USP48-211ENST00000526044 SIGLEC10Q96LC7 697 aa5.94□□□□□ -1.46
USP48-211ENST00000526044 FBXL7Q9UJT9 491 aa5.94□□□□□ -1.46
USP48-211ENST00000526044 PCDHA5Q9Y5H7 936 aa5.94□□□□□ -1.46
USP48-211ENST00000526044 ATP7BP35670 1465 aa5.94□□□□□ -1.46
USP48-211ENST00000526044 IQSEC2Q5JU85 1478 aa5.94□□□□□ -1.46
USP48-211ENST00000526044 POLR3AO14802 1390 aaPredicted RBP5.93□□□□□ -1.46
USP48-211ENST00000526044 ANKRD36BQ8N2N9 1353 aa5.93□□□□□ -1.46
USP48-211ENST00000526044 CPSF1Q10570 1443 aaKnown RBP5.93□□□□□ -1.46
USP48-211ENST00000526044 CCDC163A0A0D9SF12 145 aa5.93□□□□□ -1.46
USP48-211ENST00000526044 PFKLP17858 780 aa5.93□□□□□ -1.46
USP48-211ENST00000526044 GPR85P60893 370 aa5.93□□□□□ -1.46
USP48-211ENST00000526044 LBX2Q6XYB7 198 aa5.93□□□□□ -1.46
USP48-211ENST00000526044 MAMDC2Q7Z304 686 aaPredicted RBP5.93□□□□□ -1.46
USP48-211ENST00000526044 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.93□□□□□ -1.46
USP48-211ENST00000526044 LILRB2Q8N423 598 aa5.93□□□□□ -1.46
USP48-211ENST00000526044 ZSWIM2Q8NEG5 633 aa5.93□□□□□ -1.46
USP48-211ENST00000526044 SEC14L1Q92503 715 aa5.93□□□□□ -1.46
USP48-211ENST00000526044 ALG3Q92685 438 aa5.93□□□□□ -1.46
USP48-211ENST00000526044 PTPRN2Q92932 1015 aa5.93□□□□□ -1.46
USP48-211ENST00000526044 EXOC2Q96KP1 924 aa5.93□□□□□ -1.46
USP48-211ENST00000526044 ZCCHC4Q9H5U6 513 aa5.93□□□□□ -1.46
USP48-211ENST00000526044 CNOT6Q9ULM6 557 aaKnown RBP5.93□□□□□ -1.46
USP48-211ENST00000526044 JAG2Q9Y219 1238 aa5.93□□□□□ -1.46
USP48-211ENST00000526044 MRPS23Q9Y3D9 190 aaKnown RBP5.93□□□□□ -1.46
USP48-211ENST00000526044 SIT1Q9Y3P8 196 aa5.93□□□□□ -1.46
USP48-211ENST00000526044 IRAK3Q9Y616 596 aa5.93□□□□□ -1.46
USP48-211ENST00000526044 NPHP3Q7Z494 1330 aa5.93□□□□□ -1.46
USP48-211ENST00000526044 AKAP12Q02952 1782 aa5.93□□□□□ -1.46
USP48-211ENST00000526044 A0A1W2PP64 1363 aa5.93□□□□□ -1.46
USP48-211ENST00000526044 MYOM1P52179 1685 aa5.92□□□□□ -1.46
USP48-211ENST00000526044 TOPAZ1Q8N9V7 1692 aa5.92□□□□□ -1.46
USP48-211ENST00000526044 FYB1O15117 783 aa5.92□□□□□ -1.46
USP48-211ENST00000526044 SGSM2O43147 1006 aa5.92□□□□□ -1.46
USP48-211ENST00000526044 DGKIO75912 1065 aa5.92□□□□□ -1.46
USP48-211ENST00000526044 NCAM1P13591 858 aa5.92□□□□□ -1.46
USP48-211ENST00000526044 NCKAP1LP55160 1127 aa5.92□□□□□ -1.46
USP48-211ENST00000526044 LINC00310P59036 64 aa5.92□□□□□ -1.46
USP48-211ENST00000526044 GABREP78334 506 aa5.92□□□□□ -1.46
USP48-211ENST00000526044 CHRNA2Q15822 529 aa5.92□□□□□ -1.46
USP48-211ENST00000526044 KIZQ2M2Z5 673 aa5.92□□□□□ -1.46
USP48-211ENST00000526044 C2orf27AQ580R0 203 aa5.92□□□□□ -1.46
USP48-211ENST00000526044 CC2D1BQ5T0F9 858 aaKnown RBP5.92□□□□□ -1.46
USP48-211ENST00000526044 IGDCC3Q8IVU1 814 aa5.92□□□□□ -1.46
USP48-211ENST00000526044 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.92□□□□□ -1.46
USP48-211ENST00000526044 DDX17Q92841 729 aaKnown RBP5.92□□□□□ -1.46
USP48-211ENST00000526044 KISS1RQ969F8 398 aaPredicted RBP5.92□□□□□ -1.46
USP48-211ENST00000526044 RNF38Q9H0F5 515 aa5.92□□□□□ -1.46
USP48-211ENST00000526044 IRF2BPLQ9H1B7 796 aa5.92□□□□□ -1.46
USP48-211ENST00000526044 CDIP1Q9H305 208 aa5.92□□□□□ -1.46
USP48-211ENST00000526044 EPB41L1Q9H4G0 881 aa5.92□□□□□ -1.46
USP48-211ENST00000526044 PARD6AQ9NPB6 346 aa5.92□□□□□ -1.46
USP48-211ENST00000526044 CGNL1Q0VF96 1302 aa5.92□□□□□ -1.46
USP48-211ENST00000526044 TTC21BQ7Z4L5 1316 aa5.92□□□□□ -1.46
USP48-211ENST00000526044 TTC21AQ8NDW8 1320 aa5.92□□□□□ -1.46
USP48-211ENST00000526044 BRD4O60885 1362 aaPredicted RBP5.92□□□□□ -1.46
USP48-211ENST00000526044 KIF1AQ12756 1690 aa5.91□□□□□ -1.46
USP48-211ENST00000526044 CD163L1Q9NR16 1453 aa5.91□□□□□ -1.46
USP48-211ENST00000526044 AQP7O14520 342 aa5.91□□□□□ -1.46
USP48-211ENST00000526044 IRS4O14654 1257 aaPredicted RBP5.91□□□□□ -1.46
USP48-211ENST00000526044 HGSO14964 777 aaPredicted RBP5.91□□□□□ -1.46
USP48-211ENST00000526044 ANP32CO43423 234 aa5.91□□□□□ -1.46
USP48-211ENST00000526044 BUB1BO60566 1050 aaPredicted RBP5.91□□□□□ -1.46
USP48-211ENST00000526044 ASGR2P07307 311 aa5.91□□□□□ -1.46
USP48-211ENST00000526044 FBLN1P23142 703 aa5.91□□□□□ -1.46
USP48-211ENST00000526044 ZNF385BQ569K4 471 aa5.91□□□□□ -1.46
USP48-211ENST00000526044 MILR1Q7Z6M3 343 aa5.91□□□□□ -1.46
USP48-211ENST00000526044 MORC1Q86VD1 984 aa5.91□□□□□ -1.46
USP48-211ENST00000526044 LRRC59Q96AG4 307 aaKnown RBP5.91□□□□□ -1.46
USP48-211ENST00000526044 ALG1Q9BT22 464 aa5.91□□□□□ -1.46
USP48-211ENST00000526044 JAM3Q9BX67 310 aa5.91□□□□□ -1.46
USP48-211ENST00000526044 PALD1Q9ULE6 856 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms