RNA–Protein interactions for RNA: ENST00000525878.5

CSDE1-210, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-210ENST00000525878 PDPK1O15530 556 aa6.59□□□□□ -1.35
CSDE1-210ENST00000525878 PYGMP11217 842 aa6.59□□□□□ -1.35
CSDE1-210ENST00000525878 AOAHP28039 575 aa6.59□□□□□ -1.35
CSDE1-210ENST00000525878 HERVK_113P62684 666 aa6.59□□□□□ -1.35
CSDE1-210ENST00000525878 SUMO1P63165 101 aaKnown RBP6.59□□□□□ -1.35
CSDE1-210ENST00000525878 RASGRF1Q13972 1273 aa6.59□□□□□ -1.35
CSDE1-210ENST00000525878 TBR1Q16650 682 aa6.59□□□□□ -1.35
CSDE1-210ENST00000525878 MAMDC4Q6UXC1 1216 aa6.59□□□□□ -1.35
CSDE1-210ENST00000525878 MTDHQ86UE4 582 aaKnown RBP6.59□□□□□ -1.35
CSDE1-210ENST00000525878 PTRH1Q86Y79 214 aaKnown RBP6.59□□□□□ -1.35
CSDE1-210ENST00000525878 TRIM55Q9BYV6 548 aa6.59□□□□□ -1.35
CSDE1-210ENST00000525878 MSL2Q9HCI7 577 aa6.59□□□□□ -1.35
CSDE1-210ENST00000525878 INCENPQ9NQS7 918 aa6.59□□□□□ -1.35
CSDE1-210ENST00000525878 GALNT8Q9NY28 637 aa6.59□□□□□ -1.35
CSDE1-210ENST00000525878 ARHGAP28Q9P2N2 729 aa6.59□□□□□ -1.35
CSDE1-210ENST00000525878 ING1Q9UK53 422 aaPredicted RBP6.59□□□□□ -1.35
CSDE1-210ENST00000525878 FBXO10Q9UK96 956 aa6.59□□□□□ -1.35
CSDE1-210ENST00000525878 CLASP2O75122 1294 aaKnown RBP6.58□□□□□ -1.36
CSDE1-210ENST00000525878 MPIG6BO95866 241 aa6.58□□□□□ -1.36
CSDE1-210ENST00000525878 JAM2P57087 298 aa6.58□□□□□ -1.36
CSDE1-210ENST00000525878 NOLC1Q14978 699 aaKnown RBP eCLIP6.58□□□□□ -1.36
CSDE1-210ENST00000525878 EIF4HQ15056 248 aaKnown RBP6.58□□□□□ -1.36
CSDE1-210ENST00000525878 WDR72Q3MJ13 1102 aa6.58□□□□□ -1.36
CSDE1-210ENST00000525878 FAM209AQ5JX71 171 aa6.58□□□□□ -1.36
CSDE1-210ENST00000525878 LARP4Q71RC2 724 aaKnown RBP eCLIP6.58□□□□□ -1.36
CSDE1-210ENST00000525878 POLNQ7Z5Q5 900 aa6.58□□□□□ -1.36
CSDE1-210ENST00000525878 CFHR4Q92496 578 aa6.58□□□□□ -1.36
CSDE1-210ENST00000525878 DPYSL5Q9BPU6 564 aa6.58□□□□□ -1.36
CSDE1-210ENST00000525878 CCDC113Q9H0I3 377 aa6.58□□□□□ -1.36
CSDE1-210ENST00000525878 SMURF1Q9HCE7 757 aa6.58□□□□□ -1.36
CSDE1-210ENST00000525878 CATSPERZQ9NTU4 200 aa6.58□□□□□ -1.36
CSDE1-210ENST00000525878 NPIPB8E9PQR5 432 aa6.57□□□□□ -1.36
CSDE1-210ENST00000525878 OVOL3O00110 214 aa6.57□□□□□ -1.36
CSDE1-210ENST00000525878 ACO1P21399 889 aaKnown RBP6.57□□□□□ -1.36
CSDE1-210ENST00000525878 RRADP55042 308 aa6.57□□□□□ -1.36
CSDE1-210ENST00000525878 LACTBP83111 547 aaPredicted RBP6.57□□□□□ -1.36
CSDE1-210ENST00000525878 USP39Q53GS9 565 aaKnown RBP6.57□□□□□ -1.36
CSDE1-210ENST00000525878 TRIM68Q6AZZ1 485 aa6.57□□□□□ -1.36
CSDE1-210ENST00000525878 IGFL4Q6B9Z1 124 aa6.57□□□□□ -1.36
CSDE1-210ENST00000525878 EXOC2Q96KP1 924 aa6.57□□□□□ -1.36
CSDE1-210ENST00000525878 BTBD2Q9BX70 525 aa6.57□□□□□ -1.36
CSDE1-210ENST00000525878 NR2E1Q9Y466 385 aa6.57□□□□□ -1.36
CSDE1-210ENST00000525878 ARHGAP6O43182 974 aa6.56□□□□□ -1.36
CSDE1-210ENST00000525878 NAT1P18440 290 aa6.56□□□□□ -1.36
CSDE1-210ENST00000525878 MC4RP32245 332 aa6.56□□□□□ -1.36
CSDE1-210ENST00000525878 GABREP78334 506 aa6.56□□□□□ -1.36
CSDE1-210ENST00000525878 GUCY1A3Q02108 690 aa6.56□□□□□ -1.36
CSDE1-210ENST00000525878 SEC23AQ15436 765 aa6.56□□□□□ -1.36
CSDE1-210ENST00000525878 KANK2Q63ZY3 851 aa6.56□□□□□ -1.36
CSDE1-210ENST00000525878 CKAP2LQ8IYA6 745 aa6.56□□□□□ -1.36
CSDE1-210ENST00000525878 EXTL1Q92935 676 aa6.56□□□□□ -1.36
CSDE1-210ENST00000525878 PLA2G12BQ9BX93 195 aa6.56□□□□□ -1.36
CSDE1-210ENST00000525878 AMNQ9BXJ7 453 aa6.56□□□□□ -1.36
CSDE1-210ENST00000525878 ZNF341Q9BYN7 854 aa6.56□□□□□ -1.36
CSDE1-210ENST00000525878 GSTA4O15217 222 aa6.55□□□□□ -1.36
CSDE1-210ENST00000525878 CDC14BO60729 498 aa6.55□□□□□ -1.36
CSDE1-210ENST00000525878 HMGCRP04035 888 aa6.55□□□□□ -1.36
CSDE1-210ENST00000525878 CRY1Q16526 586 aa6.55□□□□□ -1.36
CSDE1-210ENST00000525878 NRN1LQ496H8 165 aa6.55□□□□□ -1.36
CSDE1-210ENST00000525878 MTERF2Q49AM1 385 aa6.55□□□□□ -1.36
CSDE1-210ENST00000525878 USP30Q70CQ3 517 aa6.55□□□□□ -1.36
CSDE1-210ENST00000525878 CDC6Q99741 560 aa6.55□□□□□ -1.36
CSDE1-210ENST00000525878 PFDN2Q9UHV9 154 aa6.55□□□□□ -1.36
CSDE1-210ENST00000525878 PCDHA9Q9Y5H5 950 aa6.55□□□□□ -1.36
CSDE1-210ENST00000525878 CCDC66A2RUB6 948 aa6.54□□□□□ -1.36
CSDE1-210ENST00000525878 NARSO43776 548 aaKnown RBP6.54□□□□□ -1.36
CSDE1-210ENST00000525878 DIAPH1O60610 1272 aaKnown RBP6.54□□□□□ -1.36
CSDE1-210ENST00000525878 STK10O94804 968 aaKnown RBP6.54□□□□□ -1.36
CSDE1-210ENST00000525878 FAM153BP0C7A2 387 aa6.54□□□□□ -1.36
CSDE1-210ENST00000525878 KRT15P19012 456 aa6.54□□□□□ -1.36
CSDE1-210ENST00000525878 RPS19P39019 145 aaKnown RBP6.54□□□□□ -1.36
CSDE1-210ENST00000525878 KCNQ1P51787 676 aa6.54□□□□□ -1.36
CSDE1-210ENST00000525878 ST5P78524 1137 aa6.54□□□□□ -1.36
CSDE1-210ENST00000525878 SSRP1Q08945 709 aaKnown RBP6.54□□□□□ -1.36
CSDE1-210ENST00000525878 LONRF2Q1L5Z9 754 aa6.54□□□□□ -1.36
CSDE1-210ENST00000525878 FAM47CQ5HY64 1035 aa6.54□□□□□ -1.36
CSDE1-210ENST00000525878 NBPF6Q5VWK0 638 aa6.54□□□□□ -1.36
CSDE1-210ENST00000525878 TMEM200BQ69YZ2 307 aa6.54□□□□□ -1.36
CSDE1-210ENST00000525878 NBPF4Q96M43 638 aa6.54□□□□□ -1.36
CSDE1-210ENST00000525878 OR14A2Q96R54 314 aa6.54□□□□□ -1.36
CSDE1-210ENST00000525878 DHRS4Q9BTZ2 278 aa6.54□□□□□ -1.36
CSDE1-210ENST00000525878 KIAA1683Q9H0B3 1180 aa6.54□□□□□ -1.36
CSDE1-210ENST00000525878 PRAMEF25A6NGN4 478 aa6.53□□□□□ -1.36
CSDE1-210ENST00000525878 CRTAMO95727 393 aa6.53□□□□□ -1.36
CSDE1-210ENST00000525878 SRGAP2CP0DJJ0 459 aa6.53□□□□□ -1.36
CSDE1-210ENST00000525878 ADCY8P40145 1251 aa6.53□□□□□ -1.36
CSDE1-210ENST00000525878 ECE1P42892 770 aa6.53□□□□□ -1.36
CSDE1-210ENST00000525878 PTH1RQ03431 593 aa6.53□□□□□ -1.36
CSDE1-210ENST00000525878 FOXL1Q12952 345 aa6.53□□□□□ -1.36
CSDE1-210ENST00000525878 PCOLCEQ15113 449 aa6.53□□□□□ -1.36
CSDE1-210ENST00000525878 CRB2Q5IJ48 1285 aa6.53□□□□□ -1.36
CSDE1-210ENST00000525878 NOSTRINQ8IVI9 506 aa6.53□□□□□ -1.36
CSDE1-210ENST00000525878 AMER2Q8N7J2 671 aa6.53□□□□□ -1.36
CSDE1-210ENST00000525878 FAM89AQ96GI7 184 aa6.53□□□□□ -1.36
CSDE1-210ENST00000525878 PUF60Q9UHX1 559 aaKnown RBP6.53□□□□□ -1.36
CSDE1-210ENST00000525878 CCDC9Q9Y3X0 531 aaKnown RBP6.53□□□□□ -1.36
CSDE1-210ENST00000525878 A0A0G2JNJ9 132 aa6.52□□□□□ -1.37
CSDE1-210ENST00000525878 PMS2P1A4D2B8 440 aa6.52□□□□□ -1.37
CSDE1-210ENST00000525878 KCNK3O14649 394 aa6.52□□□□□ -1.37
CSDE1-210ENST00000525878 U2SURPO15042 1029 aaKnown RBP6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms