RNA–Protein interactions for RNA: ENST00000525132.1

CSDE1-209, Transcript of cold shock domain containing E1, humanhuman

TSL 5

Gene CSDE1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-209ENST00000525132 ATXN3LQ9H3M9 355 aa4.3□□□□□ -1.72
CSDE1-209ENST00000525132 COPRSQ9NQ92 184 aa4.3□□□□□ -1.72
CSDE1-209ENST00000525132 METTL5Q9NRN9 209 aaKnown RBP4.3□□□□□ -1.72
CSDE1-209ENST00000525132 BSDC1Q9NW68 430 aaPredicted RBP4.3□□□□□ -1.72
CSDE1-209ENST00000525132 IL17BQ9UHF5 180 aa4.3□□□□□ -1.72
CSDE1-209ENST00000525132 RNF112Q9ULX5 631 aa4.3□□□□□ -1.72
CSDE1-209ENST00000525132 AP4E1Q9UPM8 1137 aa4.3□□□□□ -1.72
CSDE1-209ENST00000525132 NFAT5O94916 1531 aa4.3□□□□□ -1.72
CSDE1-209ENST00000525132 DDX60Q8IY21 1712 aaKnown RBP4.29□□□□□ -1.72
CSDE1-209ENST00000525132 SOS1Q07889 1333 aaPredicted RBP4.29□□□□□ -1.72
CSDE1-209ENST00000525132 ZNF521Q96K83 1311 aa4.29□□□□□ -1.72
CSDE1-209ENST00000525132 FAM95CA0A1B0GW59 222 aa4.29□□□□□ -1.72
CSDE1-209ENST00000525132 KLRG2A4D1S0 409 aaPredicted RBP4.29□□□□□ -1.72
CSDE1-209ENST00000525132 KIAA1324LA8MWY0 1029 aaPredicted RBP4.29□□□□□ -1.72
CSDE1-209ENST00000525132 FANCGO15287 622 aa4.29□□□□□ -1.72
CSDE1-209ENST00000525132 SMARCA5O60264 1052 aaPredicted RBP4.29□□□□□ -1.72
CSDE1-209ENST00000525132 F13BP05160 661 aa4.29□□□□□ -1.72
CSDE1-209ENST00000525132 CA3P07451 260 aa4.29□□□□□ -1.72
CSDE1-209ENST00000525132 NFICP08651 508 aa4.29□□□□□ -1.72
CSDE1-209ENST00000525132 CLCN5P51795 746 aa4.29□□□□□ -1.72
CSDE1-209ENST00000525132 GTF2A2P52657 109 aa4.29□□□□□ -1.72
CSDE1-209ENST00000525132 SEPT6Q14141 434 aa4.29□□□□□ -1.72
CSDE1-209ENST00000525132 NAALADL2Q58DX5 795 aa4.29□□□□□ -1.72
CSDE1-209ENST00000525132 ZC3H14Q6PJT7 736 aaKnown RBP4.29□□□□□ -1.72
CSDE1-209ENST00000525132 SPRED2Q7Z698 418 aa4.29□□□□□ -1.72
CSDE1-209ENST00000525132 ZAR1Q86SH2 424 aa4.29□□□□□ -1.72
CSDE1-209ENST00000525132 DTWD2Q8NBA8 298 aa4.29□□□□□ -1.72
CSDE1-209ENST00000525132 PLPPR2Q96GM1 343 aa4.29□□□□□ -1.72
CSDE1-209ENST00000525132 BCL11AQ9H165 835 aa4.29□□□□□ -1.72
CSDE1-209ENST00000525132 KBTBD4Q9NVX7 518 aa4.29□□□□□ -1.72
CSDE1-209ENST00000525132 STOML1Q9UBI4 398 aa4.29□□□□□ -1.72
CSDE1-209ENST00000525132 PCDHA11Q9Y5I1 949 aa4.29□□□□□ -1.72
CSDE1-209ENST00000525132 SNCAIPQ9Y6H5 919 aa4.29□□□□□ -1.72
CSDE1-209ENST00000525132 ZNF831Q5JPB2 1677 aa4.29□□□□□ -1.72
CSDE1-209ENST00000525132 SCO2A0A1W2PP80 73 aa4.28□□□□□ -1.72
CSDE1-209ENST00000525132 GSC2O15499 205 aa4.28□□□□□ -1.72
CSDE1-209ENST00000525132 GAS2O43903 313 aaKnown RBP4.28□□□□□ -1.72
CSDE1-209ENST00000525132 KCNK5O95279 499 aa4.28□□□□□ -1.72
CSDE1-209ENST00000525132 MED26O95402 600 aa4.28□□□□□ -1.72
CSDE1-209ENST00000525132 PF4P02776 101 aa4.28□□□□□ -1.72
CSDE1-209ENST00000525132 SLFN14P0C7P3 912 aa4.28□□□□□ -1.72
CSDE1-209ENST00000525132 RPS12P25398 132 aaKnown RBP4.28□□□□□ -1.72
CSDE1-209ENST00000525132 ASPAP45381 313 aa4.28□□□□□ -1.72
CSDE1-209ENST00000525132 CD97P48960 835 aa4.28□□□□□ -1.72
CSDE1-209ENST00000525132 TLE2Q04725 743 aa4.28□□□□□ -1.72
CSDE1-209ENST00000525132 CAMK2GQ13555 558 aaPredicted RBP4.28□□□□□ -1.72
CSDE1-209ENST00000525132 KCNC3Q14003 757 aa4.28□□□□□ -1.72
CSDE1-209ENST00000525132 SLBPQ14493 270 aaKnown RBP eCLIP4.28□□□□□ -1.72
CSDE1-209ENST00000525132 CLUL1Q15846 466 aa4.28□□□□□ -1.72
CSDE1-209ENST00000525132 CPSF6Q16630 551 aaKnown RBP eCLIP4.28□□□□□ -1.723e-7■□□□□ 8.6
CSDE1-209ENST00000525132 MSMPQ1L6U9 139 aa4.28□□□□□ -1.72
CSDE1-209ENST00000525132 TSNAXIP1Q2TAA8 658 aa4.28□□□□□ -1.72
CSDE1-209ENST00000525132 IL31Q6EBC2 164 aa4.28□□□□□ -1.72
CSDE1-209ENST00000525132 BNC2Q6ZN30 1099 aaPredicted RBP4.28□□□□□ -1.72
CSDE1-209ENST00000525132 DYMQ7RTS9 669 aa4.28□□□□□ -1.72
CSDE1-209ENST00000525132 WFDC3Q8IUB2 231 aa4.28□□□□□ -1.72
CSDE1-209ENST00000525132 ZFPM1Q8IX07 1006 aa4.28□□□□□ -1.72
CSDE1-209ENST00000525132 SECISBP2LQ93073 1101 aaKnown RBP4.28□□□□□ -1.72
CSDE1-209ENST00000525132 FBRSQ9HAH7 460 aa4.28□□□□□ -1.72
CSDE1-209ENST00000525132 MRS2Q9HD23 443 aa4.28□□□□□ -1.72
CSDE1-209ENST00000525132 ZFP64Q9NPA5 681 aa4.28□□□□□ -1.72
CSDE1-209ENST00000525132 LMCD1Q9NZU5 365 aa4.28□□□□□ -1.72
CSDE1-209ENST00000525132 ADAMTS1Q9UHI8 967 aa4.28□□□□□ -1.72
CSDE1-209ENST00000525132 POLR3KQ9Y2Y1 108 aaPredicted RBP4.28□□□□□ -1.72
CSDE1-209ENST00000525132 U3KQE9 123 aa4.28□□□□□ -1.72
CSDE1-209ENST00000525132 MGAMO43451 1857 aa4.28□□□□□ -1.72
CSDE1-209ENST00000525132 CAPN8A6NHC0 703 aa4.27□□□□□ -1.73
CSDE1-209ENST00000525132 LOC730098B7Z3J9 87 aa4.27□□□□□ -1.73
CSDE1-209ENST00000525132 TNPO2O14787 897 aaKnown RBP4.27□□□□□ -1.73
CSDE1-209ENST00000525132 KIAA0355O15063 1070 aa4.27□□□□□ -1.73
CSDE1-209ENST00000525132 SART1O43290 800 aaKnown RBP4.27□□□□□ -1.73
CSDE1-209ENST00000525132 MBTPS2O43462 519 aa4.27□□□□□ -1.73
CSDE1-209ENST00000525132 SLC28A2O43868 658 aa4.27□□□□□ -1.73
CSDE1-209ENST00000525132 SYNCRIPO60506 623 aaKnown RBP4.27□□□□□ -1.73
CSDE1-209ENST00000525132 SIX3O95343 332 aaPredicted RBP4.27□□□□□ -1.73
CSDE1-209ENST00000525132 F13A1P00488 732 aa4.27□□□□□ -1.73
CSDE1-209ENST00000525132 CR2P20023 1033 aa4.27□□□□□ -1.73
CSDE1-209ENST00000525132 ITGAEP38570 1179 aa4.27□□□□□ -1.73
CSDE1-209ENST00000525132 RPL6Q02878 288 aaKnown RBP4.27□□□□□ -1.73
CSDE1-209ENST00000525132 WIPI1Q5MNZ9 446 aaPredicted RBP4.27□□□□□ -1.73
CSDE1-209ENST00000525132 FBXL19Q6PCT2 694 aa4.27□□□□□ -1.73
CSDE1-209ENST00000525132 SMYD4Q8IYR2 804 aaPredicted RBP4.27□□□□□ -1.73
CSDE1-209ENST00000525132 MAML2Q8IZL2 1156 aaPredicted RBP4.27□□□□□ -1.73
CSDE1-209ENST00000525132 SHKBP1Q8TBC3 707 aa4.27□□□□□ -1.73
CSDE1-209ENST00000525132 GATAD2BQ8WXI9 593 aa4.27□□□□□ -1.73
CSDE1-209ENST00000525132 UBXN4Q92575 508 aa4.27□□□□□ -1.73
CSDE1-209ENST00000525132 SPATA32Q96LK8 384 aa4.27□□□□□ -1.73
CSDE1-209ENST00000525132 WNT10AQ9GZT5 417 aa4.27□□□□□ -1.73
CSDE1-209ENST00000525132 CBX8Q9HC52 389 aa4.27□□□□□ -1.73
CSDE1-209ENST00000525132 RAD18Q9NS91 495 aa4.27□□□□□ -1.73
CSDE1-209ENST00000525132 PCDHA4Q9UN74 947 aa4.27□□□□□ -1.73
CSDE1-209ENST00000525132 DAGLAQ9Y4D2 1042 aa4.27□□□□□ -1.73
CSDE1-209ENST00000525132 CELSR1Q9NYQ6 3014 aa4.27□□□□□ -1.73
CSDE1-209ENST00000525132 COL6A5A8TX70 2615 aa4.27□□□□□ -1.73
CSDE1-209ENST00000525132 CACNA1DQ01668 2161 aa4.27□□□□□ -1.73
CSDE1-209ENST00000525132 CABIN1Q9Y6J0 2220 aa4.26□□□□□ -1.73
CSDE1-209ENST00000525132 ADGRG4Q8IZF6 3080 aa4.26□□□□□ -1.73
CSDE1-209ENST00000525132 UBR4Q5T4S7 5183 aa4.26□□□□□ -1.73
CSDE1-209ENST00000525132 PHIPQ8WWQ0 1821 aa4.26□□□□□ -1.73
CSDE1-209ENST00000525132 PCLOQ9Y6V0 5065 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms