RNA–Protein interactions for RNA: ENST00000524454.1

VPS11-201, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 626 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-201ENST00000524454 CLCN1P35523 988 aa7.93□□□□□ -1.14
VPS11-201ENST00000524454 BEX3Q00994 111 aa7.93□□□□□ -1.14
VPS11-201ENST00000524454 KCNB1Q14721 858 aa7.93□□□□□ -1.14
VPS11-201ENST00000524454 ZNF174Q15697 407 aa7.93□□□□□ -1.14
VPS11-201ENST00000524454 DPCR1Q3MIW9 517 aa7.93□□□□□ -1.14
VPS11-201ENST00000524454 COBLL1Q53SF7 1204 aa7.93□□□□□ -1.14
VPS11-201ENST00000524454 FOXR2Q6PJQ5 311 aa7.93□□□□□ -1.14
VPS11-201ENST00000524454 C11orf57Q6ZUT1 292 aaPredicted RBP7.93□□□□□ -1.14
VPS11-201ENST00000524454 METTL3Q86U44 580 aaKnown RBP7.93□□□□□ -1.14
VPS11-201ENST00000524454 LUZP1Q86V48 1076 aa7.93□□□□□ -1.14
VPS11-201ENST00000524454 DHX40Q8IX18 779 aaKnown RBP7.93□□□□□ -1.14
VPS11-201ENST00000524454 MSL3Q8N5Y2 521 aaKnown RBP7.93□□□□□ -1.14
VPS11-201ENST00000524454 ARRDC4Q8NCT1 418 aa7.93□□□□□ -1.14
VPS11-201ENST00000524454 TBCKQ8TEA7 893 aa7.93□□□□□ -1.14
VPS11-201ENST00000524454 CRYGNQ8WXF5 182 aa7.93□□□□□ -1.14
VPS11-201ENST00000524454 RNF166Q96A37 237 aaPredicted RBP7.93□□□□□ -1.14
VPS11-201ENST00000524454 ZFRQ96KR1 1074 aaKnown RBP7.93□□□□□ -1.14
VPS11-201ENST00000524454 MTMR9Q96QG7 549 aa7.93□□□□□ -1.14
VPS11-201ENST00000524454 TAAR1Q96RJ0 339 aa7.93□□□□□ -1.14
VPS11-201ENST00000524454 PSTPIP2Q9H939 334 aa7.93□□□□□ -1.14
VPS11-201ENST00000524454 IMPACTQ9P2X3 320 aa7.93□□□□□ -1.14
VPS11-201ENST00000524454 STK17AQ9UEE5 414 aa7.93□□□□□ -1.14
VPS11-201ENST00000524454 ATP11BQ9Y2G3 1177 aa7.93□□□□□ -1.14
VPS11-201ENST00000524454 PCDHA5Q9Y5H7 936 aa7.93□□□□□ -1.14
VPS11-201ENST00000524454 LTBP2Q14767 1821 aa7.93□□□□□ -1.14
VPS11-201ENST00000524454 ABCB11O95342 1321 aa7.93□□□□□ -1.14
VPS11-201ENST00000524454 DOCK5Q9H7D0 1870 aa7.93□□□□□ -1.14
VPS11-201ENST00000524454 MYH7BA7E2Y1 1941 aa7.92□□□□□ -1.14
VPS11-201ENST00000524454 ASB14A6NK59 587 aa7.92□□□□□ -1.14
VPS11-201ENST00000524454 CBFA2T2O43439 604 aa7.92□□□□□ -1.14
VPS11-201ENST00000524454 ADAMTS4O75173 837 aa7.92□□□□□ -1.14
VPS11-201ENST00000524454 CYP3A4P08684 503 aa7.92□□□□□ -1.14
VPS11-201ENST00000524454 C6orf222P0C671 652 aaPredicted RBP7.92□□□□□ -1.14
VPS11-201ENST00000524454 PRKCSHP14314 528 aaPredicted RBP7.92□□□□□ -1.14
VPS11-201ENST00000524454 SMPD1P17405 629 aa7.92□□□□□ -1.14
VPS11-201ENST00000524454 HOXA13P31271 388 aaPredicted RBP7.92□□□□□ -1.14
VPS11-201ENST00000524454 CIITAP33076 1130 aa7.92□□□□□ -1.14
VPS11-201ENST00000524454 SREBF1P36956 1147 aa7.92□□□□□ -1.14
VPS11-201ENST00000524454 UBA7P41226 1012 aa7.92□□□□□ -1.14
VPS11-201ENST00000524454 ZNF75DP51815 510 aa7.92□□□□□ -1.14
VPS11-201ENST00000524454 RTP1P59025 263 aa7.92□□□□□ -1.14
VPS11-201ENST00000524454 AMPD3Q01432 767 aa7.92□□□□□ -1.14
VPS11-201ENST00000524454 TNFAIP2Q03169 654 aa7.92□□□□□ -1.14
VPS11-201ENST00000524454 PDE4DQ08499 809 aa7.92□□□□□ -1.14
VPS11-201ENST00000524454 DPYDQ12882 1025 aa7.92□□□□□ -1.14
VPS11-201ENST00000524454 KCNA10Q16322 511 aa7.92□□□□□ -1.14
VPS11-201ENST00000524454 INF2Q27J81 1249 aa7.92□□□□□ -1.14
VPS11-201ENST00000524454 TRIM60Q495X7 471 aa7.92□□□□□ -1.14
VPS11-201ENST00000524454 TAPT1Q6NXT6 567 aa7.92□□□□□ -1.14
VPS11-201ENST00000524454 PDXDC2PQ6P474 469 aa7.92□□□□□ -1.14
VPS11-201ENST00000524454 SLFN12Q8IYM2 578 aa7.92□□□□□ -1.14
VPS11-201ENST00000524454 ENOX1Q8TC92 643 aaKnown RBP7.92□□□□□ -1.14
VPS11-201ENST00000524454 SYTL5Q8TDW5 730 aaPredicted RBP7.92□□□□□ -1.14
VPS11-201ENST00000524454 PPP1R13LQ8WUF5 828 aa7.92□□□□□ -1.14
VPS11-201ENST00000524454 ABHD16BQ9H3Z7 469 aa7.92□□□□□ -1.14
VPS11-201ENST00000524454 EHMT1Q9H9B1 1298 aa7.92□□□□□ -1.14
VPS11-201ENST00000524454 KBTBD4Q9NVX7 518 aa7.92□□□□□ -1.14
VPS11-201ENST00000524454 NRBP1Q9UHY1 535 aa7.92□□□□□ -1.14
VPS11-201ENST00000524454 PCDHA1Q9Y5I3 950 aa7.92□□□□□ -1.14
VPS11-201ENST00000524454 KDM3AQ9Y4C1 1321 aa7.92□□□□□ -1.14
VPS11-201ENST00000524454 A0A1W2PQ45 241 aaPredicted RBP7.91□□□□□ -1.14
VPS11-201ENST00000524454 A0A1W2PQY0 241 aa7.91□□□□□ -1.14
VPS11-201ENST00000524454 WNT7AO00755 349 aa7.91□□□□□ -1.14
VPS11-201ENST00000524454 SORBS3O60504 671 aa7.91□□□□□ -1.14
VPS11-201ENST00000524454 CCNT1O60563 726 aaKnown RBP7.91□□□□□ -1.14
VPS11-201ENST00000524454 DUSP11O75319 330 aaKnown RBP7.91□□□□□ -1.14
VPS11-201ENST00000524454 EIF2AK2P19525 551 aaKnown RBP7.91□□□□□ -1.14
VPS11-201ENST00000524454 MUTP22033 750 aa7.91□□□□□ -1.14
VPS11-201ENST00000524454 MSNP26038 577 aaKnown RBP7.91□□□□□ -1.14
VPS11-201ENST00000524454 STAT6P42226 847 aa7.91□□□□□ -1.14
VPS11-201ENST00000524454 GSDMDP57764 484 aa7.91□□□□□ -1.14
VPS11-201ENST00000524454 GRIN1Q05586 938 aa7.91□□□□□ -1.14
VPS11-201ENST00000524454 PNOCQ13519 176 aa7.91□□□□□ -1.14
VPS11-201ENST00000524454 NCAPHQ15003 741 aa7.91□□□□□ -1.14
VPS11-201ENST00000524454 CALCRLQ16602 461 aa7.91□□□□□ -1.14
VPS11-201ENST00000524454 Q4G0T1 1027 aa7.91□□□□□ -1.14
VPS11-201ENST00000524454 HYIQ5T013 277 aa7.91□□□□□ -1.14
VPS11-201ENST00000524454 SLC39A5Q6ZMH5 540 aa7.91□□□□□ -1.14
VPS11-201ENST00000524454 RNF180Q86T96 592 aa7.91□□□□□ -1.14
VPS11-201ENST00000524454 TLK2Q86UE8 772 aa7.91□□□□□ -1.14
VPS11-201ENST00000524454 AOPEPQ8N6M6 819 aa7.91□□□□□ -1.14
VPS11-201ENST00000524454 COPS5Q92905 334 aa7.91□□□□□ -1.14
VPS11-201ENST00000524454 CCDC47Q96A33 483 aaKnown RBP7.91□□□□□ -1.14
VPS11-201ENST00000524454 KCTD12Q96CX2 325 aaKnown RBP7.91□□□□□ -1.14
VPS11-201ENST00000524454 PAGE5Q96GU1 130 aa7.91□□□□□ -1.14
VPS11-201ENST00000524454 EPSTI1Q96J88 318 aa7.91□□□□□ -1.14
VPS11-201ENST00000524454 TRIM5Q9C035 493 aa7.91□□□□□ -1.14
VPS11-201ENST00000524454 NT5C3AQ9H0P0 336 aa7.91□□□□□ -1.14
VPS11-201ENST00000524454 PRDM5Q9NQX1 630 aaPredicted RBP7.91□□□□□ -1.14
VPS11-201ENST00000524454 ADD3Q9UEY8 706 aaKnown RBP7.91□□□□□ -1.14
VPS11-201ENST00000524454 SERTAD1Q9UHV2 236 aa7.91□□□□□ -1.14
VPS11-201ENST00000524454 PHF24Q9UPV7 400 aa7.91□□□□□ -1.14
VPS11-201ENST00000524454 MRPL11Q9Y3B7 192 aaKnown RBP7.91□□□□□ -1.14
VPS11-201ENST00000524454 NR2E3Q9Y5X4 410 aa7.91□□□□□ -1.14
VPS11-201ENST00000524454 SPDYE3A6NKU9 549 aa7.9□□□□□ -1.14
VPS11-201ENST00000524454 RBAK-RBAKDNI3L0D1 243 aa7.9□□□□□ -1.14
VPS11-201ENST00000524454 MEIS2O14770 477 aa7.9□□□□□ -1.14
VPS11-201ENST00000524454 DYNC1LI2O43237 492 aaPredicted RBP7.9□□□□□ -1.14
VPS11-201ENST00000524454 ARIH2O95376 493 aa7.9□□□□□ -1.14
VPS11-201ENST00000524454 PTMAP06454 111 aaKnown RBP7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms