RNA–Protein interactions for RNA: ENST00000524258.2

CLN8-207, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 2

Gene CLN8, Length 835 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-207ENST00000524258 FAM160B1Q5W0V3 765 aa13.48□□□□□ -0.25
CLN8-207ENST00000524258 LARP1BQ659C4 914 aaKnown RBP13.48□□□□□ -0.25
CLN8-207ENST00000524258 ZNF365Q70YC5 407 aa13.48□□□□□ -0.25
CLN8-207ENST00000524258 MIER3Q7Z3K6 550 aa13.48□□□□□ -0.25
CLN8-207ENST00000524258 LINC01465Q8N7H1 131 aa13.48□□□□□ -0.25
CLN8-207ENST00000524258 KIF3AQ9Y496 699 aa13.48□□□□□ -0.25
CLN8-207ENST00000524258 NEMFO60524 1076 aa13.47□□□□□ -0.25
CLN8-207ENST00000524258 GNAT1P11488 350 aa13.47□□□□□ -0.25
CLN8-207ENST00000524258 ATP2B1P20020 1258 aa13.47□□□□□ -0.25
CLN8-207ENST00000524258 FXR1P51114 621 aaKnown RBP eCLIP13.47□□□□□ -0.25
CLN8-207ENST00000524258 MGAT3Q09327 533 aa13.47□□□□□ -0.25
CLN8-207ENST00000524258 ORC2Q13416 577 aaPredicted RBP13.47□□□□□ -0.25
CLN8-207ENST00000524258 MKRN4PQ13434 485 aaPredicted RBP13.47□□□□□ -0.25
CLN8-207ENST00000524258 EPHA7Q15375 998 aa13.47□□□□□ -0.25
CLN8-207ENST00000524258 ZNF174Q15697 407 aa13.47□□□□□ -0.25
CLN8-207ENST00000524258 TTC38Q5R3I4 469 aa13.47□□□□□ -0.25
CLN8-207ENST00000524258 LRRC8DQ7L1W4 858 aa13.47□□□□□ -0.25
CLN8-207ENST00000524258 SLFN12Q8IYM2 578 aa13.47□□□□□ -0.25
CLN8-207ENST00000524258 BBXQ8WY36 941 aaPredicted RBP13.47□□□□□ -0.25
CLN8-207ENST00000524258 HSD17B14Q9BPX1 270 aa13.47□□□□□ -0.25
CLN8-207ENST00000524258 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.47□□□□□ -0.25
CLN8-207ENST00000524258 TUBE1Q9UJT0 475 aa13.47□□□□□ -0.25
CLN8-207ENST00000524258 NOD1Q9Y239 953 aa13.47□□□□□ -0.25
CLN8-207ENST00000524258 PCDHB6Q9Y5E3 794 aa13.47□□□□□ -0.25
CLN8-207ENST00000524258 PCDHA2Q9Y5H9 948 aa13.47□□□□□ -0.25
CLN8-207ENST00000524258 COL1A2P08123 1366 aa13.46□□□□□ -0.25
CLN8-207ENST00000524258 CAND2O75155 1236 aa13.46□□□□□ -0.25
CLN8-207ENST00000524258 C22orf31O95567 290 aa13.46□□□□□ -0.25
CLN8-207ENST00000524258 CHRNA1P02708 482 aa13.46□□□□□ -0.25
CLN8-207ENST00000524258 KLRC1P26715 233 aa13.46□□□□□ -0.25
CLN8-207ENST00000524258 MCM7P33993 719 aa13.46□□□□□ -0.25
CLN8-207ENST00000524258 RFC2P35250 354 aa13.46□□□□□ -0.25
CLN8-207ENST00000524258 PRKCEQ02156 737 aa13.46□□□□□ -0.25
CLN8-207ENST00000524258 CALCRLQ16602 461 aa13.46□□□□□ -0.25
CLN8-207ENST00000524258 ZNF484Q5JVG2 852 aa13.46□□□□□ -0.25
CLN8-207ENST00000524258 MTHFD1LQ6UB35 978 aa13.46□□□□□ -0.25
CLN8-207ENST00000524258 KIAA0319LQ8IZA0 1049 aa13.46□□□□□ -0.25
CLN8-207ENST00000524258 RETREG2Q8NC44 543 aa13.46□□□□□ -0.25
CLN8-207ENST00000524258 HERVK_113Q902F9 699 aa13.46□□□□□ -0.25
CLN8-207ENST00000524258 NIFKQ9BYG3 293 aaKnown RBP13.46□□□□□ -0.25
CLN8-207ENST00000524258 CXXC1Q9P0U4 656 aaPredicted RBP13.46□□□□□ -0.25
CLN8-207ENST00000524258 TRPC6Q9Y210 931 aa13.46□□□□□ -0.25
CLN8-207ENST00000524258 CHD9Q3L8U1 2897 aa13.46□□□□□ -0.25
CLN8-207ENST00000524258 SCN5AQ14524 2016 aa13.46□□□□□ -0.26
CLN8-207ENST00000524258 WDR81Q562E7 1941 aa13.45□□□□□ -0.26
CLN8-207ENST00000524258 SMIM35A0A1B0GVV1 85 aa13.45□□□□□ -0.26
CLN8-207ENST00000524258 TMEM150BA6NC51 233 aa13.45□□□□□ -0.26
CLN8-207ENST00000524258 SLITRK3O94933 977 aa13.45□□□□□ -0.26
CLN8-207ENST00000524258 OATP04181 439 aa13.45□□□□□ -0.26
CLN8-207ENST00000524258 SYT1P21579 422 aa13.45□□□□□ -0.26
CLN8-207ENST00000524258 THPOP40225 353 aa13.45□□□□□ -0.26
CLN8-207ENST00000524258 IGBP1P78318 339 aa13.45□□□□□ -0.26
CLN8-207ENST00000524258 IL17AQ16552 155 aa13.45□□□□□ -0.26
CLN8-207ENST00000524258 FAM109BQ6ICB4 259 aaPredicted RBP13.45□□□□□ -0.26
CLN8-207ENST00000524258 TAF2Q6P1X5 1199 aa13.45□□□□□ -0.26
CLN8-207ENST00000524258 ANO5Q75V66 913 aa13.45□□□□□ -0.26
CLN8-207ENST00000524258 CCDC155Q8N6L0 562 aa13.45□□□□□ -0.26
CLN8-207ENST00000524258 BANK1Q8NDB2 785 aa13.45□□□□□ -0.26
CLN8-207ENST00000524258 DNAJB3Q8WWF6 145 aa13.45□□□□□ -0.26
CLN8-207ENST00000524258 TTC12Q9H892 705 aaPredicted RBP13.45□□□□□ -0.26
CLN8-207ENST00000524258 RGL1Q9NZL6 768 aa13.45□□□□□ -0.26
CLN8-207ENST00000524258 PCDHA12Q9UN75 941 aa13.45□□□□□ -0.26
CLN8-207ENST00000524258 SAMM50Q9Y512 469 aa13.45□□□□□ -0.26
CLN8-207ENST00000524258 IGKV6-21A0A0C4DH24 114 aa13.44□□□□□ -0.26
CLN8-207ENST00000524258 RSPH10B2B2RC85 870 aa13.44□□□□□ -0.26
CLN8-207ENST00000524258 ZBTB39O15060 712 aa13.44□□□□□ -0.26
CLN8-207ENST00000524258 LYPLA2O95372 231 aa13.44□□□□□ -0.26
CLN8-207ENST00000524258 BAG4O95429 457 aaKnown RBP13.44□□□□□ -0.26
CLN8-207ENST00000524258 PARNO95453 639 aaKnown RBP13.44□□□□□ -0.26
CLN8-207ENST00000524258 FGBP02675 491 aa13.44□□□□□ -0.26
CLN8-207ENST00000524258 P4HBP07237 508 aaKnown RBP13.44□□□□□ -0.26
CLN8-207ENST00000524258 PFKMP08237 780 aa13.44□□□□□ -0.26
CLN8-207ENST00000524258 RSPH10BP0C881 870 aa13.44□□□□□ -0.26
CLN8-207ENST00000524258 SPATA31C1P0DKV0 1188 aa13.44□□□□□ -0.26
CLN8-207ENST00000524258 TXKP42681 527 aa13.44□□□□□ -0.26
CLN8-207ENST00000524258 QARSP47897 775 aaKnown RBP13.44□□□□□ -0.26
CLN8-207ENST00000524258 PSMC5P62195 406 aa13.44□□□□□ -0.26
CLN8-207ENST00000524258 XKR3Q5GH77 459 aa13.44□□□□□ -0.26
CLN8-207ENST00000524258 MCTP1Q6DN14 999 aa13.44□□□□□ -0.26
CLN8-207ENST00000524258 PSRC1Q6PGN9 363 aaPredicted RBP13.44□□□□□ -0.26
CLN8-207ENST00000524258 DEFB128Q7Z7B8 93 aa13.44□□□□□ -0.26
CLN8-207ENST00000524258 C4orf19Q8IY42 314 aa13.44□□□□□ -0.26
CLN8-207ENST00000524258 RPUSD2Q8IZ73 545 aaKnown RBP13.44□□□□□ -0.26
CLN8-207ENST00000524258 ZNF579Q8NAF0 562 aaKnown RBP13.44□□□□□ -0.26
CLN8-207ENST00000524258 DYDC2Q96IM9 177 aa13.44□□□□□ -0.26
CLN8-207ENST00000524258 FAM167AQ96KS9 214 aa13.44□□□□□ -0.26
CLN8-207ENST00000524258 EIF2AK1Q9BQI3 630 aaKnown RBP13.44□□□□□ -0.26
CLN8-207ENST00000524258 FOXD4L1Q9NU39 408 aa13.44□□□□□ -0.26
CLN8-207ENST00000524258 TCEAL9Q9UHQ7 104 aa13.44□□□□□ -0.26
CLN8-207ENST00000524258 MTMR6Q9Y217 621 aa13.44□□□□□ -0.26
CLN8-207ENST00000524258 TANC1Q9C0D5 1861 aa13.44□□□□□ -0.26
CLN8-207ENST00000524258 POTEMA6NI47 508 aa13.43□□□□□ -0.26
CLN8-207ENST00000524258 H3BQV1 296 aa13.43□□□□□ -0.26
CLN8-207ENST00000524258 OR52Z1P0C646 297 aa13.43□□□□□ -0.26
CLN8-207ENST00000524258 RESTQ13127 1097 aa13.43□□□□□ -0.26
CLN8-207ENST00000524258 PTGDRQ13258 359 aa13.43□□□□□ -0.26
CLN8-207ENST00000524258 PLEKHG4Q58EX7 1191 aa13.43□□□□□ -0.26
CLN8-207ENST00000524258 RILPL1Q5EBL4 403 aa13.43□□□□□ -0.26
CLN8-207ENST00000524258 NCAPH2Q6IBW4 605 aa13.43□□□□□ -0.26
CLN8-207ENST00000524258 KAT6AQ92794 2004 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms