RNA–Protein interactions for RNA: ENST00000523765.1

LAMA4-220, Transcript of laminin subunit alpha 4, humanhuman

TSL 5

Gene LAMA4, Length 1,054 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-220ENST00000523765 VSIG10LQ86VR7 867 aa11.26□□□□□ -0.61
LAMA4-220ENST00000523765 CMTR2Q8IYT2 770 aaKnown RBP11.26□□□□□ -0.61
LAMA4-220ENST00000523765 MICAL1Q8TDZ2 1067 aa11.26□□□□□ -0.61
LAMA4-220ENST00000523765 PPP2R3CQ969Q6 453 aa11.26□□□□□ -0.61
LAMA4-220ENST00000523765 NEK1Q96PY6 1258 aa11.26□□□□□ -0.61
LAMA4-220ENST00000523765 JMJD4Q9H9V9 463 aa11.26□□□□□ -0.61
LAMA4-220ENST00000523765 MLXIPQ9HAP2 919 aa11.26□□□□□ -0.61
LAMA4-220ENST00000523765 SORCS3Q9UPU3 1222 aa11.26□□□□□ -0.61
LAMA4-220ENST00000523765 KAT6AQ92794 2004 aa11.26□□□□□ -0.61
LAMA4-220ENST00000523765 DENND4AQ7Z401 1863 aa11.25□□□□□ -0.61
LAMA4-220ENST00000523765 EP300Q09472 2414 aaPredicted RBP11.25□□□□□ -0.61
LAMA4-220ENST00000523765 HIDE1A8MVS5 230 aa11.25□□□□□ -0.61
LAMA4-220ENST00000523765 FSCN2O14926 492 aa11.25□□□□□ -0.61
LAMA4-220ENST00000523765 HSPD1P10809 573 aaKnown RBP11.25□□□□□ -0.61
LAMA4-220ENST00000523765 HAND2P61296 217 aa11.25□□□□□ -0.61
LAMA4-220ENST00000523765 SEMA3FQ13275 785 aa11.25□□□□□ -0.61
LAMA4-220ENST00000523765 MTMR3Q13615 1198 aa11.25□□□□□ -0.61
LAMA4-220ENST00000523765 ANGPT1Q15389 498 aa11.25□□□□□ -0.61
LAMA4-220ENST00000523765 NAALADL2Q58DX5 795 aa11.25□□□□□ -0.61
LAMA4-220ENST00000523765 KANK3Q6NY19 840 aa11.25□□□□□ -0.61
LAMA4-220ENST00000523765 CYFIP1Q7L576 1253 aa11.25□□□□□ -0.61
LAMA4-220ENST00000523765 TBC1D10CQ8IV04 446 aa11.25□□□□□ -0.61
LAMA4-220ENST00000523765 DCLK2Q8N568 766 aa11.25□□□□□ -0.61
LAMA4-220ENST00000523765 PI4K2BQ8TCG2 481 aa11.25□□□□□ -0.61
LAMA4-220ENST00000523765 DNAJB3Q8WWF6 145 aa11.25□□□□□ -0.61
LAMA4-220ENST00000523765 GPR20Q99678 358 aa11.25□□□□□ -0.61
LAMA4-220ENST00000523765 VAT1LQ9HCJ6 419 aa11.25□□□□□ -0.61
LAMA4-220ENST00000523765 RALYQ9UKM9 306 aaKnown RBP11.25□□□□□ -0.61
LAMA4-220ENST00000523765 PNMA2Q9UL42 364 aa11.25□□□□□ -0.61
LAMA4-220ENST00000523765 CDY2AQ9Y6F7 541 aa11.25□□□□□ -0.61
LAMA4-220ENST00000523765 CCDC171Q6TFL3 1326 aa11.25□□□□□ -0.61
LAMA4-220ENST00000523765 C8orf34Q49A92 452 aa11.24□□□□□ -0.61
LAMA4-220ENST00000523765 MARCH8Q5T0T0 291 aa11.24□□□□□ -0.61
LAMA4-220ENST00000523765 PLPP4Q5VZY2 271 aa11.24□□□□□ -0.61
LAMA4-220ENST00000523765 MCTP2Q6DN12 878 aa11.24□□□□□ -0.61
LAMA4-220ENST00000523765 TMEM184AQ6ZMB5 413 aa11.24□□□□□ -0.61
LAMA4-220ENST00000523765 STOX1Q6ZVD7 989 aa11.24□□□□□ -0.61
LAMA4-220ENST00000523765 MCF2L2Q86YR7 1114 aa11.24□□□□□ -0.61
LAMA4-220ENST00000523765 UBALD2Q8IYN6 164 aa11.24□□□□□ -0.61
LAMA4-220ENST00000523765 FLCNQ8NFG4 579 aa11.24□□□□□ -0.61
LAMA4-220ENST00000523765 TMX1Q9H3N1 280 aa11.24□□□□□ -0.61
LAMA4-220ENST00000523765 R4GN57 208 aa11.24□□□□□ -0.61
LAMA4-220ENST00000523765 FGF18O76093 207 aa11.23□□□□□ -0.61
LAMA4-220ENST00000523765 FGAP02671 866 aa11.23□□□□□ -0.61
LAMA4-220ENST00000523765 CLCN5P51795 746 aa11.23□□□□□ -0.61
LAMA4-220ENST00000523765 MRPS9P82933 396 aaKnown RBP11.23□□□□□ -0.61
LAMA4-220ENST00000523765 SP4Q02446 784 aa11.23□□□□□ -0.61
LAMA4-220ENST00000523765 GHRHRQ02643 423 aa11.23□□□□□ -0.61
LAMA4-220ENST00000523765 TMEM62Q0P6H9 643 aa11.23□□□□□ -0.61
LAMA4-220ENST00000523765 TSHZ1Q6ZSZ6 1077 aa11.23□□□□□ -0.61
LAMA4-220ENST00000523765 NPAS4Q8IUM7 802 aa11.23□□□□□ -0.61
LAMA4-220ENST00000523765 CCDC105Q8IYK2 499 aa11.23□□□□□ -0.61
LAMA4-220ENST00000523765 IPO9Q96P70 1041 aaKnown RBP11.23□□□□□ -0.61
LAMA4-220ENST00000523765 USP26Q9BXU7 913 aa11.23□□□□□ -0.61
LAMA4-220ENST00000523765 LIMD1Q9UGP4 676 aa11.23□□□□□ -0.61
LAMA4-220ENST00000523765 MRPL11Q9Y3B7 192 aaKnown RBP11.23□□□□□ -0.61
LAMA4-220ENST00000523765 NEDD4P46934 1319 aa11.23□□□□□ -0.61
LAMA4-220ENST00000523765 USP24Q9UPU5 2620 aa11.22□□□□□ -0.61
LAMA4-220ENST00000523765 MGEA5O60502 916 aa11.22□□□□□ -0.61
LAMA4-220ENST00000523765 GNAT1P11488 350 aa11.22□□□□□ -0.61
LAMA4-220ENST00000523765 TMEM266Q2M3C6 531 aa11.22□□□□□ -0.61
LAMA4-220ENST00000523765 SLC35G1Q2M3R5 365 aa11.22□□□□□ -0.61
LAMA4-220ENST00000523765 GPATCH4Q5T3I0 446 aaKnown RBP11.22□□□□□ -0.61
LAMA4-220ENST00000523765 FAM102BQ5T8I3 360 aa11.22□□□□□ -0.61
LAMA4-220ENST00000523765 KCNV1Q6PIU1 500 aa11.22□□□□□ -0.61
LAMA4-220ENST00000523765 STAG2Q8N3U4 1231 aa11.22□□□□□ -0.61
LAMA4-220ENST00000523765 C12orf76Q8N812 135 aaPredicted RBP11.22□□□□□ -0.61
LAMA4-220ENST00000523765 TTC14Q96N46 770 aa11.22□□□□□ -0.61
LAMA4-220ENST00000523765 CEP250Q9BV73 2442 aa11.22□□□□□ -0.61
LAMA4-220ENST00000523765 MFSD1Q9H3U5 465 aa11.22□□□□□ -0.61
LAMA4-220ENST00000523765 TMEM260Q9NX78 707 aa11.22□□□□□ -0.61
LAMA4-220ENST00000523765 DLL3Q9NYJ7 618 aa11.22□□□□□ -0.61
LAMA4-220ENST00000523765 PADI3Q9ULW8 664 aa11.22□□□□□ -0.61
LAMA4-220ENST00000523765 FRYQ5TBA9 3013 aa11.22□□□□□ -0.61
LAMA4-220ENST00000523765 BAHCC1Q9P281 2608 aa11.22□□□□□ -0.61
LAMA4-220ENST00000523765 FANCMQ8IYD8 2048 aa11.21□□□□□ -0.61
LAMA4-220ENST00000523765 LAMA4Q16363 1823 aa11.21□□□□□ -0.61
LAMA4-220ENST00000523765 NRCAMQ92823 1304 aa11.21□□□□□ -0.61
LAMA4-220ENST00000523765 NOP56O00567 594 aaKnown RBP11.21□□□□□ -0.61
LAMA4-220ENST00000523765 TGFB3P10600 412 aa11.21□□□□□ -0.61
LAMA4-220ENST00000523765 SCG2P13521 617 aa11.21□□□□□ -0.61
LAMA4-220ENST00000523765 AOC1P19801 751 aa11.21□□□□□ -0.61
LAMA4-220ENST00000523765 MARK3P27448 753 aa11.21□□□□□ -0.61
LAMA4-220ENST00000523765 PBX3P40426 434 aa11.21□□□□□ -0.61
LAMA4-220ENST00000523765 MRPS6P82932 125 aaKnown RBP11.21□□□□□ -0.61
LAMA4-220ENST00000523765 NUCB1Q02818 461 aa11.21□□□□□ -0.61
LAMA4-220ENST00000523765 ALX1Q15699 326 aa11.21□□□□□ -0.61
LAMA4-220ENST00000523765 DTWD2Q8NBA8 298 aa11.21□□□□□ -0.61
LAMA4-220ENST00000523765 COLGALT1Q8NBJ5 622 aa11.21□□□□□ -0.61
LAMA4-220ENST00000523765 PNMA1Q8ND90 353 aa11.21□□□□□ -0.61
LAMA4-220ENST00000523765 KCNG4Q8TDN1 519 aa11.21□□□□□ -0.61
LAMA4-220ENST00000523765 RIN2Q8WYP3 895 aaPredicted RBP11.21□□□□□ -0.61
LAMA4-220ENST00000523765 FAM227BQ96M60 508 aa11.21□□□□□ -0.61
LAMA4-220ENST00000523765 MAF1Q9H063 256 aa11.21□□□□□ -0.61
LAMA4-220ENST00000523765 CWH43Q9H720 699 aa11.21□□□□□ -0.61
LAMA4-220ENST00000523765 AAASQ9NRG9 546 aa11.21□□□□□ -0.61
LAMA4-220ENST00000523765 TYW1Q9NV66 732 aaKnown RBP11.21□□□□□ -0.61
LAMA4-220ENST00000523765 RTEL1Q9NZ71 1219 aa11.21□□□□□ -0.61
LAMA4-220ENST00000523765 NR2E1Q9Y466 385 aa11.21□□□□□ -0.61
LAMA4-220ENST00000523765 COL4A3Q01955 1670 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms