RNA–Protein interactions for RNA: ENST00000523417.5

TOP1MT-217, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 3

Gene TOP1MT, Length 698 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-217ENST00000523417 FAM86B1E9PN63 330 aa14.4□□□□□ -0.1
TOP1MT-217ENST00000523417 RBAK-RBAKDNI3L0D1 243 aa14.4□□□□□ -0.1
TOP1MT-217ENST00000523417 HBP1O60381 514 aa14.4□□□□□ -0.1
TOP1MT-217ENST00000523417 DGKIO75912 1065 aa14.4□□□□□ -0.1
TOP1MT-217ENST00000523417 CCNE2O96020 404 aa14.4□□□□□ -0.1
TOP1MT-217ENST00000523417 FAM86B2P0C5J1 330 aa14.4□□□□□ -0.1
TOP1MT-217ENST00000523417 CIITAP33076 1130 aa14.4□□□□□ -0.1
TOP1MT-217ENST00000523417 METAP2P50579 478 aaKnown RBP eCLIP14.4□□□□□ -0.1
TOP1MT-217ENST00000523417 TIGD5Q53EQ6 642 aa14.4□□□□□ -0.1
TOP1MT-217ENST00000523417 POTEBQ6S5H4 581 aa14.4□□□□□ -0.1
TOP1MT-217ENST00000523417 MTHFD1LQ6UB35 978 aa14.4□□□□□ -0.1
TOP1MT-217ENST00000523417 ATP8B4Q8TF62 1192 aa14.4□□□□□ -0.1
TOP1MT-217ENST00000523417 CCDC12Q8WUD4 166 aaPredicted RBP14.4□□□□□ -0.1
TOP1MT-217ENST00000523417 PLVAPQ9BX97 442 aa14.4□□□□□ -0.1
TOP1MT-217ENST00000523417 CELF4Q9BZC1 486 aaKnown RBP14.4□□□□□ -0.1
TOP1MT-217ENST00000523417 TMEM260Q9NX78 707 aa14.4□□□□□ -0.1
TOP1MT-217ENST00000523417 SNX14Q9Y5W7 946 aa14.4□□□□□ -0.1
TOP1MT-217ENST00000523417 IGSF9BQ9UPX0 1349 aa14.4□□□□□ -0.1
TOP1MT-217ENST00000523417 MICAL3Q7RTP6 2002 aa14.39□□□□□ -0.11
TOP1MT-217ENST00000523417 PSMA5P28066 241 aa14.39□□□□□ -0.11
TOP1MT-217ENST00000523417 GNA11P29992 359 aa14.39□□□□□ -0.11
TOP1MT-217ENST00000523417 ZNF76P36508 570 aa14.39□□□□□ -0.11
TOP1MT-217ENST00000523417 NTRK3Q16288 839 aa14.39□□□□□ -0.11
TOP1MT-217ENST00000523417 NAALADL2Q58DX5 795 aa14.39□□□□□ -0.11
TOP1MT-217ENST00000523417 ZNF484Q5JVG2 852 aa14.39□□□□□ -0.11
TOP1MT-217ENST00000523417 Q6ZUG5 572 aa14.39□□□□□ -0.11
TOP1MT-217ENST00000523417 PLA2G4DQ86XP0 818 aa14.39□□□□□ -0.11
TOP1MT-217ENST00000523417 BANK1Q8NDB2 785 aa14.39□□□□□ -0.11
TOP1MT-217ENST00000523417 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.39□□□□□ -0.11
TOP1MT-217ENST00000523417 PGBD1Q96JS3 809 aa14.39□□□□□ -0.11
TOP1MT-217ENST00000523417 C6orf50Q9HD87 102 aa14.39□□□□□ -0.11
TOP1MT-217ENST00000523417 PADI3Q9ULW8 664 aa14.39□□□□□ -0.11
TOP1MT-217ENST00000523417 TRPC6Q9Y210 931 aa14.39□□□□□ -0.11
TOP1MT-217ENST00000523417 MAFBQ9Y5Q3 323 aaPredicted RBP14.39□□□□□ -0.11
TOP1MT-217ENST00000523417 TRPV2Q9Y5S1 764 aa14.39□□□□□ -0.11
TOP1MT-217ENST00000523417 COL1A2P08123 1366 aa14.38□□□□□ -0.11
TOP1MT-217ENST00000523417 M0QZ92 97 aa14.38□□□□□ -0.11
TOP1MT-217ENST00000523417 IPO5O00410 1097 aaKnown RBP14.38□□□□□ -0.11
TOP1MT-217ENST00000523417 IFNAR1P17181 557 aa14.38□□□□□ -0.11
TOP1MT-217ENST00000523417 ATP4AP20648 1035 aa14.38□□□□□ -0.11
TOP1MT-217ENST00000523417 COL9A1P20849 921 aa14.38□□□□□ -0.11
TOP1MT-217ENST00000523417 RPS6KB1P23443 525 aa14.38□□□□□ -0.11
TOP1MT-217ENST00000523417 KLRC1P26715 233 aa14.38□□□□□ -0.11
TOP1MT-217ENST00000523417 CD52P31358 61 aa14.38□□□□□ -0.11
TOP1MT-217ENST00000523417 IGBP1P78318 339 aa14.38□□□□□ -0.11
TOP1MT-217ENST00000523417 FGD1P98174 961 aa14.38□□□□□ -0.11
TOP1MT-217ENST00000523417 APOBRQ0VD83 1088 aa14.38□□□□□ -0.11
TOP1MT-217ENST00000523417 JAKMIP3Q5VZ66 844 aa14.38□□□□□ -0.11
TOP1MT-217ENST00000523417 FAM160B1Q5W0V3 765 aa14.38□□□□□ -0.11
TOP1MT-217ENST00000523417 ZNF746Q6NUN9 644 aaPredicted RBP14.38□□□□□ -0.11
TOP1MT-217ENST00000523417 BLOC1S2Q6QNY1 142 aa14.38□□□□□ -0.11
TOP1MT-217ENST00000523417 KIAA0319LQ8IZA0 1049 aa14.38□□□□□ -0.11
TOP1MT-217ENST00000523417 LINC01599Q8WXQ3 324 aa14.38□□□□□ -0.11
TOP1MT-217ENST00000523417 BRF1Q92994 677 aa14.38□□□□□ -0.11
TOP1MT-217ENST00000523417 P2RX5Q93086 422 aa14.38□□□□□ -0.11
TOP1MT-217ENST00000523417 PABPC5Q96DU9 382 aaKnown RBP14.38□□□□□ -0.11
TOP1MT-217ENST00000523417 C11orf84Q9BUA3 381 aaPredicted RBP14.38□□□□□ -0.11
TOP1MT-217ENST00000523417 RNF26Q9BY78 433 aaPredicted RBP14.38□□□□□ -0.11
TOP1MT-217ENST00000523417 NSUN3Q9H649 340 aaKnown RBP14.38□□□□□ -0.11
TOP1MT-217ENST00000523417 ADGRA3Q8IWK6 1321 aa14.38□□□□□ -0.11
TOP1MT-217ENST00000523417 GRXCR2A6NFK2 248 aa14.37□□□□□ -0.11
TOP1MT-217ENST00000523417 ZBTB42B2RXF5 422 aa14.37□□□□□ -0.11
TOP1MT-217ENST00000523417 STAG3L1P0CL83 205 aa14.37□□□□□ -0.11
TOP1MT-217ENST00000523417 CPA1P15085 419 aa14.37□□□□□ -0.11
TOP1MT-217ENST00000523417 USP11P51784 963 aa14.37□□□□□ -0.11
TOP1MT-217ENST00000523417 SETQ01105 290 aaPredicted RBP14.37□□□□□ -0.11
TOP1MT-217ENST00000523417 KRT76Q01546 638 aa14.37□□□□□ -0.11
TOP1MT-217ENST00000523417 CTC1Q2NKJ3 1217 aa14.37□□□□□ -0.11
TOP1MT-217ENST00000523417 SWSAP1Q6NVH7 229 aa14.37□□□□□ -0.11
TOP1MT-217ENST00000523417 MIS18BP1Q6P0N0 1132 aa14.37□□□□□ -0.11
TOP1MT-217ENST00000523417 NPAS4Q8IUM7 802 aa14.37□□□□□ -0.11
TOP1MT-217ENST00000523417 FAM178BQ8IXR5 827 aa14.37□□□□□ -0.11
TOP1MT-217ENST00000523417 SMAP1Q8IYB5 467 aaPredicted RBP14.37□□□□□ -0.11
TOP1MT-217ENST00000523417 CMTR2Q8IYT2 770 aaKnown RBP14.37□□□□□ -0.11
TOP1MT-217ENST00000523417 FAM177A1Q8N128 213 aaPredicted RBP14.37□□□□□ -0.11
TOP1MT-217ENST00000523417 ZNF710Q8N1W2 664 aa14.37□□□□□ -0.11
TOP1MT-217ENST00000523417 BICD2Q8TD16 824 aa14.37□□□□□ -0.11
TOP1MT-217ENST00000523417 BBXQ8WY36 941 aaPredicted RBP14.37□□□□□ -0.11
TOP1MT-217ENST00000523417 ZBTB10Q96DT7 871 aa14.37□□□□□ -0.11
TOP1MT-217ENST00000523417 JAKMIP1Q96N16 626 aaKnown RBP14.37□□□□□ -0.11
TOP1MT-217ENST00000523417 FAM49AQ9H0Q0 323 aaPredicted RBP14.37□□□□□ -0.11
TOP1MT-217ENST00000523417 ZNF302Q9NR11 478 aa14.37□□□□□ -0.11
TOP1MT-217ENST00000523417 SH3GLB2Q9NR46 395 aa14.37□□□□□ -0.11
TOP1MT-217ENST00000523417 ARIH1Q9Y4X5 557 aaPredicted RBP14.37□□□□□ -0.11
TOP1MT-217ENST00000523417 REV3LO60673 3130 aa14.37□□□□□ -0.11
TOP1MT-217ENST00000523417 KAT6AQ92794 2004 aa14.37□□□□□ -0.11
TOP1MT-217ENST00000523417 BRWD1Q9NSI6 2320 aa14.36□□□□□ -0.11
TOP1MT-217ENST00000523417 TTC3P53804 2025 aa14.36□□□□□ -0.11
TOP1MT-217ENST00000523417 PI4K2BG5E9Z4 385 aa14.36□□□□□ -0.11
TOP1MT-217ENST00000523417 EDIL3O43854 480 aa14.36□□□□□ -0.11
TOP1MT-217ENST00000523417 REC8O95072 547 aa14.36□□□□□ -0.11
TOP1MT-217ENST00000523417 PDIA3P30101 505 aaKnown RBP14.36□□□□□ -0.11
TOP1MT-217ENST00000523417 BTG3Q14201 252 aaPredicted RBP14.36□□□□□ -0.11
TOP1MT-217ENST00000523417 TCEAL5Q5H9L2 206 aa14.36□□□□□ -0.11
TOP1MT-217ENST00000523417 ODR4Q5SWX8 454 aa14.36□□□□□ -0.11
TOP1MT-217ENST00000523417 CCDC60Q8IWA6 550 aaPredicted RBP14.36□□□□□ -0.11
TOP1MT-217ENST00000523417 REXO1Q8N1G1 1221 aaKnown RBP14.36□□□□□ -0.11
TOP1MT-217ENST00000523417 TRAPPC12Q8WVT3 735 aa14.36□□□□□ -0.11
TOP1MT-217ENST00000523417 ZNF577Q9BSK1 485 aa14.36□□□□□ -0.11
TOP1MT-217ENST00000523417 TMX1Q9H3N1 280 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms