RNA–Protein interactions for RNA: ENST00000521932.1

VPS13B-210, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 1,055 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-210ENST00000521932 SH3TC2Q8TF17 1288 aa9.5□□□□□ -0.89
VPS13B-210ENST00000521932 ZNF333Q96JL9 665 aa9.5□□□□□ -0.89
VPS13B-210ENST00000521932 PGBD1Q96JS3 809 aa9.5□□□□□ -0.89
VPS13B-210ENST00000521932 INPP4AQ96PE3 977 aaPredicted RBP9.5□□□□□ -0.89
VPS13B-210ENST00000521932 CNPY2Q9Y2B0 182 aa9.5□□□□□ -0.89
VPS13B-210ENST00000521932 DDX49Q9Y6V7 483 aaKnown RBP9.5□□□□□ -0.89
VPS13B-210ENST00000521932 CYP3A7-CYP3A51PA0A087WV96 503 aa9.49□□□□□ -0.89
VPS13B-210ENST00000521932 CCDC194A0A1B0GVG4 234 aa9.49□□□□□ -0.89
VPS13B-210ENST00000521932 A0A1W2PRU2 124 aa9.49□□□□□ -0.89
VPS13B-210ENST00000521932 H3BQV1 296 aa9.49□□□□□ -0.89
VPS13B-210ENST00000521932 MEIS1O00470 390 aa9.49□□□□□ -0.89
VPS13B-210ENST00000521932 SEPT4O43236 478 aa9.49□□□□□ -0.89
VPS13B-210ENST00000521932 STX6O43752 255 aa9.49□□□□□ -0.89
VPS13B-210ENST00000521932 TGFB3P10600 412 aa9.49□□□□□ -0.89
VPS13B-210ENST00000521932 MYCLP12524 364 aaPredicted RBP9.49□□□□□ -0.89
VPS13B-210ENST00000521932 ITGB5P18084 799 aa9.49□□□□□ -0.89
VPS13B-210ENST00000521932 CYP3A7P24462 503 aa9.49□□□□□ -0.89
VPS13B-210ENST00000521932 ICAM3P32942 547 aa9.49□□□□□ -0.89
VPS13B-210ENST00000521932 ANP32AP39687 249 aaKnown RBP9.49□□□□□ -0.89
VPS13B-210ENST00000521932 CEP55Q53EZ4 464 aa9.49□□□□□ -0.89
VPS13B-210ENST00000521932 PRAMEF19Q5SWL8 479 aa9.49□□□□□ -0.89
VPS13B-210ENST00000521932 IQSEC1Q6DN90 963 aa9.49□□□□□ -0.89
VPS13B-210ENST00000521932 PPP4R3AQ6IN85 833 aa9.49□□□□□ -0.89
VPS13B-210ENST00000521932 KCNV1Q6PIU1 500 aa9.49□□□□□ -0.89
VPS13B-210ENST00000521932 MOXD1Q6UVY6 613 aa9.49□□□□□ -0.89
VPS13B-210ENST00000521932 PIK3AP1Q6ZUJ8 805 aa9.49□□□□□ -0.89
VPS13B-210ENST00000521932 NIPA1Q7RTP0 329 aa9.49□□□□□ -0.89
VPS13B-210ENST00000521932 NOSTRINQ8IVI9 506 aa9.49□□□□□ -0.89
VPS13B-210ENST00000521932 PHTF2Q8N3S3 785 aa9.49□□□□□ -0.89
VPS13B-210ENST00000521932 TRPV1Q8NER1 839 aa9.49□□□□□ -0.89
VPS13B-210ENST00000521932 MXRA8Q9BRK3 442 aa9.49□□□□□ -0.89
VPS13B-210ENST00000521932 JADE2Q9NQC1 790 aa9.49□□□□□ -0.89
VPS13B-210ENST00000521932 RTEL1Q9NZ71 1219 aa9.49□□□□□ -0.89
VPS13B-210ENST00000521932 UBIAD1Q9Y5Z9 338 aa9.49□□□□□ -0.89
VPS13B-210ENST00000521932 SPATA31C2B4DYI2 1134 aa9.48□□□□□ -0.89
VPS13B-210ENST00000521932 KIF28PB7ZC32 967 aa9.48□□□□□ -0.89
VPS13B-210ENST00000521932 FAM86B1E9PN63 330 aa9.48□□□□□ -0.89
VPS13B-210ENST00000521932 FAM86B2P0C5J1 330 aa9.48□□□□□ -0.89
VPS13B-210ENST00000521932 RNF144AP50876 292 aaPredicted RBP9.48□□□□□ -0.89
VPS13B-210ENST00000521932 INF2Q27J81 1249 aa9.48□□□□□ -0.89
VPS13B-210ENST00000521932 CCDC144BQ3MJ40 725 aa9.48□□□□□ -0.89
VPS13B-210ENST00000521932 Q4G0T1 1027 aa9.48□□□□□ -0.89
VPS13B-210ENST00000521932 CCDC62Q6P9F0 684 aa9.48□□□□□ -0.89
VPS13B-210ENST00000521932 EEPD1Q7L9B9 569 aa9.48□□□□□ -0.89
VPS13B-210ENST00000521932 NEK8Q86SG6 692 aa9.48□□□□□ -0.89
VPS13B-210ENST00000521932 FBXO16Q8IX29 292 aaPredicted RBP9.48□□□□□ -0.89
VPS13B-210ENST00000521932 CYP2W1Q8TAV3 490 aa9.48□□□□□ -0.89
VPS13B-210ENST00000521932 SCFD2Q8WU76 684 aa9.48□□□□□ -0.89
VPS13B-210ENST00000521932 GPRASP2Q96D09 838 aa9.48□□□□□ -0.89
VPS13B-210ENST00000521932 CDHR1Q96JP9 859 aa9.48□□□□□ -0.89
VPS13B-210ENST00000521932 MBOAT7Q96N66 472 aa9.48□□□□□ -0.89
VPS13B-210ENST00000521932 WDR11Q9BZH6 1224 aa9.48□□□□□ -0.89
VPS13B-210ENST00000521932 PAK6Q9NQU5 681 aaPredicted RBP9.48□□□□□ -0.89
VPS13B-210ENST00000521932 PDGFCQ9NRA1 345 aa9.48□□□□□ -0.89
VPS13B-210ENST00000521932 DDX41Q9UJV9 622 aaKnown RBP9.48□□□□□ -0.89
VPS13B-210ENST00000521932 FAM184BQ9ULE4 1060 aa9.48□□□□□ -0.89
VPS13B-210ENST00000521932 MTMR6Q9Y217 621 aa9.48□□□□□ -0.89
VPS13B-210ENST00000521932 Q9Y3F1 56 aa9.48□□□□□ -0.89
VPS13B-210ENST00000521932 IGLV3-22A0A075B6J6 115 aa9.47□□□□□ -0.89
VPS13B-210ENST00000521932 NKRFO15226 690 aaKnown RBP eCLIP9.47□□□□□ -0.89
VPS13B-210ENST00000521932 FIBPO43427 364 aa9.47□□□□□ -0.89
VPS13B-210ENST00000521932 MSCO60682 206 aa9.47□□□□□ -0.89
VPS13B-210ENST00000521932 TXNP10599 105 aaKnown RBP9.47□□□□□ -0.89
VPS13B-210ENST00000521932 AKR1A1P14550 325 aa9.47□□□□□ -0.89
VPS13B-210ENST00000521932 CAPN2P17655 700 aa9.47□□□□□ -0.89
VPS13B-210ENST00000521932 CCND3P30281 292 aaPredicted RBP9.47□□□□□ -0.89
VPS13B-210ENST00000521932 DDIT3P35638 169 aa9.47□□□□□ -0.89
VPS13B-210ENST00000521932 ADCYAP1R1P41586 468 aa9.47□□□□□ -0.89
VPS13B-210ENST00000521932 TRAPPC10P48553 1259 aa9.47□□□□□ -0.89
VPS13B-210ENST00000521932 NKX3-2P78367 333 aa9.47□□□□□ -0.89
VPS13B-210ENST00000521932 SP2Q02086 613 aa9.47□□□□□ -0.89
VPS13B-210ENST00000521932 TNFAIP2Q03169 654 aa9.47□□□□□ -0.89
VPS13B-210ENST00000521932 MTMR1Q13613 665 aa9.47□□□□□ -0.89
VPS13B-210ENST00000521932 GNL2Q13823 731 aaKnown RBP9.47□□□□□ -0.89
VPS13B-210ENST00000521932 TTLL4Q14679 1199 aa9.47□□□□□ -0.89
VPS13B-210ENST00000521932 MTFR1Q15390 333 aa9.47□□□□□ -0.89
VPS13B-210ENST00000521932 GNPTABQ3T906 1256 aa9.47□□□□□ -0.89
VPS13B-210ENST00000521932 DUSP28Q4G0W2 176 aa9.47□□□□□ -0.89
VPS13B-210ENST00000521932 SEPT14Q6ZU15 432 aa9.47□□□□□ -0.89
VPS13B-210ENST00000521932 BRAPQ7Z569 592 aa9.47□□□□□ -0.89
VPS13B-210ENST00000521932 NLRX1Q86UT6 975 aa9.47□□□□□ -0.89
VPS13B-210ENST00000521932 ZSCAN1Q8NBB4 408 aa9.47□□□□□ -0.89
VPS13B-210ENST00000521932 ADAMTS19Q8TE59 1207 aa9.47□□□□□ -0.89
VPS13B-210ENST00000521932 NANOS1Q8WY41 292 aaKnown RBP9.47□□□□□ -0.89
VPS13B-210ENST00000521932 LENG9Q96B70 501 aa9.47□□□□□ -0.89
VPS13B-210ENST00000521932 NAP1L4Q99733 375 aaKnown RBP9.47□□□□□ -0.89
VPS13B-210ENST00000521932 SENP7Q9BQF6 1050 aa9.47□□□□□ -0.89
VPS13B-210ENST00000521932 KCNH7Q9NS40 1196 aa9.47□□□□□ -0.89
VPS13B-210ENST00000521932 ZHX1Q9UKY1 873 aaPredicted RBP9.47□□□□□ -0.89
VPS13B-210ENST00000521932 GNEQ9Y223 722 aaKnown RBP9.47□□□□□ -0.89
VPS13B-210ENST00000521932 LRRC37A2A6NM11 1700 aa9.46□□□□□ -0.89
VPS13B-210ENST00000521932 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.46□□□□□ -0.9
VPS13B-210ENST00000521932 MEN1O00255 615 aa9.46□□□□□ -0.9
VPS13B-210ENST00000521932 ADCY6O43306 1168 aa9.46□□□□□ -0.9
VPS13B-210ENST00000521932 CCNT1O60563 726 aaKnown RBP9.46□□□□□ -0.9
VPS13B-210ENST00000521932 DUSP11O75319 330 aaKnown RBP9.46□□□□□ -0.9
VPS13B-210ENST00000521932 ARIH2O95376 493 aa9.46□□□□□ -0.9
VPS13B-210ENST00000521932 ARP10275 920 aa9.46□□□□□ -0.9
VPS13B-210ENST00000521932 CCL5P13501 91 aa9.46□□□□□ -0.9
VPS13B-210ENST00000521932 GCFC2P16383 781 aaKnown RBP9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms