RNA–Protein interactions for RNA: ENST00000521646.1

CSMD1-210, Transcript of CUB and Sushi multiple domains 1, human

TSL 5

Gene CSMD1, Length 1,003 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSMD1-210	ENST00000521646	PTCRA	Q6ISU1	281 aa	Predicted RBP	12.84	□□□□□ -0.35
CSMD1-210	ENST00000521646	PIBF1	Q8WXW3	757 aa		12.84	□□□□□ -0.35
CSMD1-210	ENST00000521646	INPP4A	Q96PE3	977 aa	Predicted RBP	12.84	□□□□□ -0.35
CSMD1-210	ENST00000521646	GPR20	Q99678	358 aa		12.84	□□□□□ -0.35
CSMD1-210	ENST00000521646	MYL10	Q9BUA6	226 aa		12.84	□□□□□ -0.35
CSMD1-210	ENST00000521646	RC3H2	Q9HBD1	1191 aa	Known RBP	12.84	□□□□□ -0.35
CSMD1-210	ENST00000521646	RTEL1	Q9NZ71	1219 aa		12.84	□□□□□ -0.35
CSMD1-210	ENST00000521646	LMCD1	Q9NZU5	365 aa		12.84	□□□□□ -0.35
CSMD1-210	ENST00000521646	USP34	Q70CQ2	3546 aa		12.84	□□□□□ -0.35
CSMD1-210	ENST00000521646	PIEZO1	Q92508	2521 aa		12.83	□□□□□ -0.36
CSMD1-210	ENST00000521646		B4DLN1	442 aa		12.83	□□□□□ -0.36
CSMD1-210	ENST00000521646		H3BRB1	525 aa		12.83	□□□□□ -0.36
CSMD1-210	ENST00000521646	WNT7A	O00755	349 aa		12.83	□□□□□ -0.36
CSMD1-210	ENST00000521646	GPR37L1	O60883	481 aa		12.83	□□□□□ -0.36
CSMD1-210	ENST00000521646	ATP9A	O75110	1047 aa		12.83	□□□□□ -0.36
CSMD1-210	ENST00000521646	CHRNA1	P02708	482 aa		12.83	□□□□□ -0.36
CSMD1-210	ENST00000521646	CCNYL3	P0C7X3	344 aa		12.83	□□□□□ -0.36
CSMD1-210	ENST00000521646	GTF2F1	P35269	517 aa	Known RBP eCLIP	12.83	□□□□□ -0.36
CSMD1-210	ENST00000521646	LTBR	P36941	435 aa		12.83	□□□□□ -0.36
CSMD1-210	ENST00000521646	MRPL12	P52815	198 aa	Known RBP	12.83	□□□□□ -0.36
CSMD1-210	ENST00000521646	DLX2	Q07687	328 aa	Predicted RBP	12.83	□□□□□ -0.36
CSMD1-210	ENST00000521646	TCEAL5	Q5H9L2	206 aa		12.83	□□□□□ -0.36
CSMD1-210	ENST00000521646	USP17L6P	Q6QN14	398 aa		12.83	□□□□□ -0.36
CSMD1-210	ENST00000521646	CYFIP1	Q7L576	1253 aa		12.83	□□□□□ -0.36
CSMD1-210	ENST00000521646	NEK9	Q8TD19	979 aa		12.83	□□□□□ -0.36
CSMD1-210	ENST00000521646	LINC01599	Q8WXQ3	324 aa		12.83	□□□□□ -0.36
CSMD1-210	ENST00000521646	ATP6V0A1	Q93050	837 aa		12.83	□□□□□ -0.36
CSMD1-210	ENST00000521646	TOP1MT	Q969P6	601 aa		12.83	□□□□□ -0.36
CSMD1-210	ENST00000521646	FAM122A	Q96E09	287 aa		12.83	□□□□□ -0.36
CSMD1-210	ENST00000521646	KATNAL1	Q9BW62	490 aa		12.83	□□□□□ -0.36
CSMD1-210	ENST00000521646	TUT1	Q9H6E5	874 aa	Known RBP	12.83	□□□□□ -0.36
CSMD1-210	ENST00000521646	KIAA1671	Q9BY89	1806 aa		12.83	□□□□□ -0.36
CSMD1-210	ENST00000521646	C17orf102	A2RUQ5	167 aa		12.82	□□□□□ -0.36
CSMD1-210	ENST00000521646	SPATA31C2	B4DYI2	1134 aa		12.82	□□□□□ -0.36
CSMD1-210	ENST00000521646	MEIS2	O14770	477 aa		12.82	□□□□□ -0.36
CSMD1-210	ENST00000521646	UPP2	O95045	317 aa		12.82	□□□□□ -0.36
CSMD1-210	ENST00000521646	ICAM3	P32942	547 aa		12.82	□□□□□ -0.36
CSMD1-210	ENST00000521646	PTPRN	Q16849	979 aa		12.82	□□□□□ -0.36
CSMD1-210	ENST00000521646	TMEM31	Q5JXX7	168 aa		12.82	□□□□□ -0.36
CSMD1-210	ENST00000521646	LMBR1	Q8WVP7	490 aa		12.82	□□□□□ -0.36
CSMD1-210	ENST00000521646	UBAC1	Q9BSL1	405 aa		12.82	□□□□□ -0.36
CSMD1-210	ENST00000521646	KRT23	Q9C075	422 aa		12.82	□□□□□ -0.36
CSMD1-210	ENST00000521646	EVA1B	Q9NVM1	165 aa		12.82	□□□□□ -0.36
CSMD1-210	ENST00000521646	INSL6	Q9Y581	213 aa		12.82	□□□□□ -0.36
CSMD1-210	ENST00000521646	RALGAPA2	Q2PPJ7	1873 aa		12.81	□□□□□ -0.36
CSMD1-210	ENST00000521646	GCOM1	H8Y6P7	765 aa	Predicted RBP	12.81	□□□□□ -0.36
CSMD1-210	ENST00000521646	PARN	O95453	639 aa	Known RBP	12.81	□□□□□ -0.36
CSMD1-210	ENST00000521646	POLR2M	P0CAP2	368 aa		12.81	□□□□□ -0.36
CSMD1-210	ENST00000521646	CCND2	P30279	289 aa		12.81	□□□□□ -0.36
CSMD1-210	ENST00000521646	MFAP1	P55081	439 aa	Known RBP	12.81	□□□□□ -0.36
CSMD1-210	ENST00000521646	SP4	Q02446	784 aa		12.81	□□□□□ -0.36
CSMD1-210	ENST00000521646	MGAT3	Q09327	533 aa		12.81	□□□□□ -0.36
CSMD1-210	ENST00000521646	CAMK1	Q14012	370 aa		12.81	□□□□□ -0.36
CSMD1-210	ENST00000521646	CCDC178	Q5BJE1	867 aa		12.81	□□□□□ -0.36
CSMD1-210	ENST00000521646	CMTR1	Q8N1G2	835 aa	Known RBP	12.81	□□□□□ -0.36
CSMD1-210	ENST00000521646	IGDCC4	Q8TDY8	1250 aa		12.81	□□□□□ -0.36
CSMD1-210	ENST00000521646	MRPL38	Q96DV4	380 aa	Known RBP	12.81	□□□□□ -0.36
CSMD1-210	ENST00000521646	TOR4A	Q9NXH8	423 aa		12.81	□□□□□ -0.36
CSMD1-210	ENST00000521646	LIMD1	Q9UGP4	676 aa		12.81	□□□□□ -0.36
CSMD1-210	ENST00000521646	ZNF318	Q5VUA4	2279 aa		12.81	□□□□□ -0.36
CSMD1-210	ENST00000521646		H3BNC9	293 aa		12.8	□□□□□ -0.36
CSMD1-210	ENST00000521646	GRM6	O15303	877 aa		12.8	□□□□□ -0.36
CSMD1-210	ENST00000521646	PLEKHA8P1	O95397	391 aa		12.8	□□□□□ -0.36
CSMD1-210	ENST00000521646	TGFB3	P10600	412 aa		12.8	□□□□□ -0.36
CSMD1-210	ENST00000521646	FAM26D	Q5JW98	314 aa		12.8	□□□□□ -0.36
CSMD1-210	ENST00000521646	MARCH8	Q5T0T0	291 aa		12.8	□□□□□ -0.36
CSMD1-210	ENST00000521646	TTC22	Q5TAA0	569 aa		12.8	□□□□□ -0.36
CSMD1-210	ENST00000521646	DESI1	Q6ICB0	168 aa		12.8	□□□□□ -0.36
CSMD1-210	ENST00000521646	METTL7B	Q6UX53	244 aa		12.8	□□□□□ -0.36
CSMD1-210	ENST00000521646	TMEM192	Q8IY95	271 aa		12.8	□□□□□ -0.36
CSMD1-210	ENST00000521646	MB21D2	Q8IYB1	491 aa	Predicted RBP	12.8	□□□□□ -0.36
CSMD1-210	ENST00000521646	GJD3	Q8N144	294 aa		12.8	□□□□□ -0.36
CSMD1-210	ENST00000521646	CRIPAK	Q8N1N5	446 aa		12.8	□□□□□ -0.36
CSMD1-210	ENST00000521646	TSC1	Q92574	1164 aa		12.8	□□□□□ -0.36
CSMD1-210	ENST00000521646	MRGPRX2	Q96LB1	330 aa		12.8	□□□□□ -0.36
CSMD1-210	ENST00000521646	PCYT2	Q99447	389 aa		12.8	□□□□□ -0.36
CSMD1-210	ENST00000521646	RWDD1	Q9H446	243 aa	Predicted RBP	12.8	□□□□□ -0.36
CSMD1-210	ENST00000521646	EHMT1	Q9H9B1	1298 aa		12.8	□□□□□ -0.36
CSMD1-210	ENST00000521646	MLXIP	Q9HAP2	919 aa		12.8	□□□□□ -0.36
CSMD1-210	ENST00000521646	MYO15A	Q9UKN7	3530 aa		12.79	□□□□□ -0.36
CSMD1-210	ENST00000521646	PNMA6F	A0A0J9YX94	578 aa		12.79	□□□□□ -0.36
CSMD1-210	ENST00000521646	GSTTP1	A0A1W2PQM5	241 aa		12.79	□□□□□ -0.36
CSMD1-210	ENST00000521646	hCG_1642624	A0A1W2PR95	340 aa		12.79	□□□□□ -0.36
CSMD1-210	ENST00000521646		E7EWF7	191 aa		12.79	□□□□□ -0.36
CSMD1-210	ENST00000521646	LINC01565	O15544	149 aa		12.79	□□□□□ -0.36
CSMD1-210	ENST00000521646	CSPG5	O95196	566 aa		12.79	□□□□□ -0.36
CSMD1-210	ENST00000521646	AMH	P03971	560 aa		12.79	□□□□□ -0.36
CSMD1-210	ENST00000521646	GHR	P10912	638 aa		12.79	□□□□□ -0.36
CSMD1-210	ENST00000521646	KCNA2	P16389	499 aa		12.79	□□□□□ -0.36
CSMD1-210	ENST00000521646	ITGB5	P18084	799 aa		12.79	□□□□□ -0.36
CSMD1-210	ENST00000521646	RXRA	P19793	462 aa		12.79	□□□□□ -0.36
CSMD1-210	ENST00000521646	DNAJB1	P25685	340 aa		12.79	□□□□□ -0.36
CSMD1-210	ENST00000521646	CHML	P26374	656 aa		12.79	□□□□□ -0.36
CSMD1-210	ENST00000521646	ZP2	Q05996	745 aa		12.79	□□□□□ -0.36
CSMD1-210	ENST00000521646	GPM6B	Q13491	265 aa		12.79	□□□□□ -0.36
CSMD1-210	ENST00000521646	LPIN1	Q14693	890 aa		12.79	□□□□□ -0.36
CSMD1-210	ENST00000521646	UTP14C	Q5TAP6	766 aa	Known RBP	12.79	□□□□□ -0.36
CSMD1-210	ENST00000521646	RTN4RL1	Q86UN2	441 aa	Predicted RBP	12.79	□□□□□ -0.36
CSMD1-210	ENST00000521646	RAB11FIP4	Q86YS3	637 aa		12.79	□□□□□ -0.36
CSMD1-210	ENST00000521646	CNNM2	Q9H8M5	875 aa		12.79	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms