RNA–Protein interactions for RNA: ENST00000521553.5

RUNX1T1-234, Transcript of RUNX1 translocation partner 1, humanhuman

TSL 1 (best) BASIC

Gene RUNX1T1, Length 1,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1T1-234ENST00000521553 PDE4CQ08493 712 aa7.62□□□□□ -1.19
RUNX1T1-234ENST00000521553 RRP1BQ14684 758 aaKnown RBP7.62□□□□□ -1.19
RUNX1T1-234ENST00000521553 ZYXQ15942 572 aaKnown RBP7.62□□□□□ -1.19
RUNX1T1-234ENST00000521553 ABCB5Q2M3G0 1257 aa7.62□□□□□ -1.19
RUNX1T1-234ENST00000521553 SHROOM1Q2M3G4 852 aaPredicted RBP7.62□□□□□ -1.19
RUNX1T1-234ENST00000521553 CYP27C1Q4G0S4 372 aa7.62□□□□□ -1.19
RUNX1T1-234ENST00000521553 MCMDC2Q4G0Z9 681 aa7.62□□□□□ -1.19
RUNX1T1-234ENST00000521553 KRTAP5-3Q6L8H2 238 aa7.62□□□□□ -1.19
RUNX1T1-234ENST00000521553 CTR9Q6PD62 1173 aa7.62□□□□□ -1.19
RUNX1T1-234ENST00000521553 CWC27Q6UX04 472 aaKnown RBP7.62□□□□□ -1.19
RUNX1T1-234ENST00000521553 SKAP1Q86WV1 359 aa7.62□□□□□ -1.19
RUNX1T1-234ENST00000521553 GALNT12Q8IXK2 581 aa7.62□□□□□ -1.19
RUNX1T1-234ENST00000521553 IFNL3Q8IZI9 196 aa7.62□□□□□ -1.19
RUNX1T1-234ENST00000521553 SLC44A5Q8NCS7 719 aa7.62□□□□□ -1.19
RUNX1T1-234ENST00000521553 BRI3BPQ8WY22 251 aa7.62□□□□□ -1.19
RUNX1T1-234ENST00000521553 FEZ1Q99689 392 aa7.62□□□□□ -1.19
RUNX1T1-234ENST00000521553 TRIM56Q9BRZ2 755 aaKnown RBP7.62□□□□□ -1.19
RUNX1T1-234ENST00000521553 EPB41L4AQ9HCS5 686 aaPredicted RBP7.62□□□□□ -1.19
RUNX1T1-234ENST00000521553 HELLSQ9NRZ9 838 aa7.62□□□□□ -1.19
RUNX1T1-234ENST00000521553 SWAP70Q9UH65 585 aa7.62□□□□□ -1.19
RUNX1T1-234ENST00000521553 ZBTB21Q9ULJ3 1066 aa7.62□□□□□ -1.19
RUNX1T1-234ENST00000521553 CCDC171Q6TFL3 1326 aa7.62□□□□□ -1.19
RUNX1T1-234ENST00000521553 BTBD19C9JJ37 291 aa7.61□□□□□ -1.19
RUNX1T1-234ENST00000521553 SLC3A2P08195 630 aaKnown RBP7.61□□□□□ -1.19
RUNX1T1-234ENST00000521553 SHMT1P34896 483 aa7.61□□□□□ -1.19
RUNX1T1-234ENST00000521553 SPP2Q13103 211 aa7.61□□□□□ -1.19
RUNX1T1-234ENST00000521553 TAF1CQ15572 869 aaPredicted RBP7.61□□□□□ -1.19
RUNX1T1-234ENST00000521553 C12orf60Q5U649 245 aa7.61□□□□□ -1.19
RUNX1T1-234ENST00000521553 TATDN1Q6P1N9 297 aa7.61□□□□□ -1.19
RUNX1T1-234ENST00000521553 GIMAP6Q6P9H5 292 aa7.61□□□□□ -1.19
RUNX1T1-234ENST00000521553 ZNF574Q6ZN55 896 aaPredicted RBP7.61□□□□□ -1.19
RUNX1T1-234ENST00000521553 SPRED2Q7Z698 418 aa7.61□□□□□ -1.19
RUNX1T1-234ENST00000521553 METTL16Q86W50 562 aaKnown RBP7.61□□□□□ -1.19
RUNX1T1-234ENST00000521553 FAM43AQ8N2R8 423 aa7.61□□□□□ -1.19
RUNX1T1-234ENST00000521553 BHLHE22Q8NFJ8 381 aaPredicted RBP7.61□□□□□ -1.19
RUNX1T1-234ENST00000521553 FAM84AQ96KN4 292 aa7.61□□□□□ -1.19
RUNX1T1-234ENST00000521553 MKNK2Q9HBH9 465 aa7.61□□□□□ -1.19
RUNX1T1-234ENST00000521553 TMOD4Q9NZQ9 345 aa7.61□□□□□ -1.19
RUNX1T1-234ENST00000521553 AFG3L2Q9Y4W6 797 aa7.61□□□□□ -1.19
RUNX1T1-234ENST00000521553 MYH4Q9Y623 1939 aa7.61□□□□□ -1.19
RUNX1T1-234ENST00000521553 CASP8AP2Q9UKL3 1982 aa7.6□□□□□ -1.19
RUNX1T1-234ENST00000521553 ZSWIM8A7E2V4 1837 aa7.6□□□□□ -1.19
RUNX1T1-234ENST00000521553 ROBO3Q96MS0 1386 aa7.6□□□□□ -1.19
RUNX1T1-234ENST00000521553 A0A0G2JLL6 359 aaPredicted RBP7.6□□□□□ -1.19
RUNX1T1-234ENST00000521553 SMIM22K7EJ46 135 aa7.6□□□□□ -1.19
RUNX1T1-234ENST00000521553 PDHXO00330 501 aa7.6□□□□□ -1.19
RUNX1T1-234ENST00000521553 CXCL11O14625 94 aa7.6□□□□□ -1.19
RUNX1T1-234ENST00000521553 AKR1B1P15121 316 aa7.6□□□□□ -1.19
RUNX1T1-234ENST00000521553 CDK8P49336 464 aa7.6□□□□□ -1.19
RUNX1T1-234ENST00000521553 HMGCS2P54868 508 aa7.6□□□□□ -1.19
RUNX1T1-234ENST00000521553 ATP2B2Q01814 1243 aa7.6□□□□□ -1.19
RUNX1T1-234ENST00000521553 GABPAQ06546 454 aa7.6□□□□□ -1.19
RUNX1T1-234ENST00000521553 CRHR2Q13324 411 aa7.6□□□□□ -1.19
RUNX1T1-234ENST00000521553 SEPT2Q15019 361 aa7.6□□□□□ -1.19
RUNX1T1-234ENST00000521553 SBK1Q52WX2 424 aa7.6□□□□□ -1.19
RUNX1T1-234ENST00000521553 VPS53Q5VIR6 699 aa7.6□□□□□ -1.19
RUNX1T1-234ENST00000521553 C16orf86Q6ZW13 317 aa7.6□□□□□ -1.19
RUNX1T1-234ENST00000521553 FASTKD5Q7L8L6 764 aaKnown RBP7.6□□□□□ -1.19
RUNX1T1-234ENST00000521553 PRRT2Q7Z6L0 340 aaPredicted RBP7.6□□□□□ -1.19
RUNX1T1-234ENST00000521553 ZNF589Q86UQ0 364 aaPredicted RBP7.6□□□□□ -1.19
RUNX1T1-234ENST00000521553 ZSCAN18Q8TBC5 510 aaPredicted RBP7.6□□□□□ -1.19
RUNX1T1-234ENST00000521553 MISP3Q96FF7 219 aa7.6□□□□□ -1.19
RUNX1T1-234ENST00000521553 PTPN18Q99952 460 aa7.6□□□□□ -1.19
RUNX1T1-234ENST00000521553 ZNF287Q9HBT7 754 aa7.6□□□□□ -1.19
RUNX1T1-234ENST00000521553 TOMM22Q9NS69 142 aa7.6□□□□□ -1.19
RUNX1T1-234ENST00000521553 GINM1Q9NU53 330 aa7.6□□□□□ -1.19
RUNX1T1-234ENST00000521553 PPP4R2Q9NY27 417 aa7.6□□□□□ -1.19
RUNX1T1-234ENST00000521553 GREB1LQ9C091 1923 aaPredicted RBP7.6□□□□□ -1.19
RUNX1T1-234ENST00000521553 SYNGAP1Q96PV0 1343 aa7.59□□□□□ -1.19
RUNX1T1-234ENST00000521553 PRDM1O75626 825 aa7.59□□□□□ -1.19
RUNX1T1-234ENST00000521553 B3GALT4O96024 378 aa7.59□□□□□ -1.19
RUNX1T1-234ENST00000521553 ICA1Q05084 483 aa7.59□□□□□ -1.19
RUNX1T1-234ENST00000521553 PDE4BQ07343 736 aa7.59□□□□□ -1.19
RUNX1T1-234ENST00000521553 PPARAQ07869 468 aa7.59□□□□□ -1.19
RUNX1T1-234ENST00000521553 BNIP3Q12983 259 aa7.59□□□□□ -1.19
RUNX1T1-234ENST00000521553 PABPC4Q13310 644 aaKnown RBP eCLIP7.59□□□□□ -1.19
RUNX1T1-234ENST00000521553 TMEM179Q6ZVK1 233 aa7.59□□□□□ -1.19
RUNX1T1-234ENST00000521553 ANKRD23Q86SG2 305 aa7.59□□□□□ -1.19
RUNX1T1-234ENST00000521553 TICAM2Q86XR7 235 aa7.59□□□□□ -1.19
RUNX1T1-234ENST00000521553 WFDC3Q8IUB2 231 aa7.59□□□□□ -1.19
RUNX1T1-234ENST00000521553 ZNF444Q8N0Y2 327 aaPredicted RBP7.59□□□□□ -1.19
RUNX1T1-234ENST00000521553 SMCR8Q8TEV9 937 aaPredicted RBP7.59□□□□□ -1.19
RUNX1T1-234ENST00000521553 RUFY2Q8WXA3 655 aa7.59□□□□□ -1.19
RUNX1T1-234ENST00000521553 PARK7Q99497 189 aaKnown RBP7.59□□□□□ -1.19
RUNX1T1-234ENST00000521553 RC3H2Q9HBD1 1191 aaKnown RBP7.59□□□□□ -1.19
RUNX1T1-234ENST00000521553 PRDM10Q9NQV6 1147 aa7.59□□□□□ -1.19
RUNX1T1-234ENST00000521553 MGAMO43451 1857 aa7.59□□□□□ -1.19
RUNX1T1-234ENST00000521553 RAD50Q92878 1312 aa7.58□□□□□ -1.2
RUNX1T1-234ENST00000521553 FKTNO75072 461 aa7.58□□□□□ -1.2
RUNX1T1-234ENST00000521553 TSPY3P0CV98 308 aa7.58□□□□□ -1.2
RUNX1T1-234ENST00000521553 TSPY8P0CW00 308 aa7.58□□□□□ -1.2
RUNX1T1-234ENST00000521553 CYP2C8P10632 490 aa7.58□□□□□ -1.2
RUNX1T1-234ENST00000521553 HSPD1P10809 573 aaKnown RBP7.58□□□□□ -1.2
RUNX1T1-234ENST00000521553 BACE1P56817 501 aa7.58□□□□□ -1.2
RUNX1T1-234ENST00000521553 HAND2P61296 217 aa7.58□□□□□ -1.2
RUNX1T1-234ENST00000521553 IRX3P78415 501 aaPredicted RBP7.58□□□□□ -1.2
RUNX1T1-234ENST00000521553 RRP12Q5JTH9 1297 aaKnown RBP7.58□□□□□ -1.2
RUNX1T1-234ENST00000521553 TREML2Q5T2D2 321 aa7.58□□□□□ -1.2
RUNX1T1-234ENST00000521553 ZNF296Q8WUU4 475 aaPredicted RBP7.58□□□□□ -1.2
RUNX1T1-234ENST00000521553 CCDC17Q96LX7 622 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms