RNA–Protein interactions for RNA: ENST00000521283.1

TRIM35-204, Transcript of tripartite motif containing 35, humanhuman

TSL 2

Gene TRIM35, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-204ENST00000521283 ATP9AO75110 1047 aa11.58□□□□□ -0.56
TRIM35-204ENST00000521283 CIITAP33076 1130 aa11.58□□□□□ -0.56
TRIM35-204ENST00000521283 EPHB4P54760 987 aa11.58□□□□□ -0.56
TRIM35-204ENST00000521283 JAKMIP3Q5VZ66 844 aa11.58□□□□□ -0.56
TRIM35-204ENST00000521283 TAF2Q6P1X5 1199 aa11.58□□□□□ -0.56
TRIM35-204ENST00000521283 LRRC8DQ7L1W4 858 aa11.58□□□□□ -0.56
TRIM35-204ENST00000521283 RPAINQ86UA6 219 aa11.58□□□□□ -0.56
TRIM35-204ENST00000521283 RSPH3Q86UC2 560 aa11.58□□□□□ -0.56
TRIM35-204ENST00000521283 SERINC5Q86VE9 423 aa11.58□□□□□ -0.56
TRIM35-204ENST00000521283 SMAP1Q8IYB5 467 aaPredicted RBP11.58□□□□□ -0.56
TRIM35-204ENST00000521283 GLG1Q92896 1179 aa11.58□□□□□ -0.56
TRIM35-204ENST00000521283 ATP6V0A1Q93050 837 aa11.58□□□□□ -0.56
TRIM35-204ENST00000521283 RNPEPQ9H4A4 650 aa11.58□□□□□ -0.56
TRIM35-204ENST00000521283 AGO4Q9HCK5 861 aaKnown RBP11.58□□□□□ -0.56
TRIM35-204ENST00000521283 MSRAQ9UJ68 235 aa11.58□□□□□ -0.56
TRIM35-204ENST00000521283 SLC4A7Q9Y6M7 1214 aa11.58□□□□□ -0.56
TRIM35-204ENST00000521283 KIF28PB7ZC32 967 aa11.57□□□□□ -0.56
TRIM35-204ENST00000521283 IPO5O00410 1097 aaKnown RBP11.57□□□□□ -0.56
TRIM35-204ENST00000521283 LGR5O75473 907 aa11.57□□□□□ -0.56
TRIM35-204ENST00000521283 ATG7O95352 703 aa11.57□□□□□ -0.56
TRIM35-204ENST00000521283 SMIM10L2AP0DMW4 78 aa11.57□□□□□ -0.56
TRIM35-204ENST00000521283 SMIM10L2BP0DMW5 78 aa11.57□□□□□ -0.56
TRIM35-204ENST00000521283 CKBP12277 381 aa11.57□□□□□ -0.56
TRIM35-204ENST00000521283 KRT76Q01546 638 aa11.57□□□□□ -0.56
TRIM35-204ENST00000521283 FAM160B1Q5W0V3 765 aa11.57□□□□□ -0.56
TRIM35-204ENST00000521283 ZNF746Q6NUN9 644 aaPredicted RBP11.57□□□□□ -0.56
TRIM35-204ENST00000521283 MOXD1Q6UVY6 613 aa11.57□□□□□ -0.56
TRIM35-204ENST00000521283 PLA2G4DQ86XP0 818 aa11.57□□□□□ -0.56
TRIM35-204ENST00000521283 BLIDQ8IZY5 108 aa11.57□□□□□ -0.56
TRIM35-204ENST00000521283 SLC9A7Q96T83 725 aa11.57□□□□□ -0.56
TRIM35-204ENST00000521283 FTOQ9C0B1 505 aaKnown RBP eCLIP11.57□□□□□ -0.56
TRIM35-204ENST00000521283 UPF2Q9HAU5 1272 aaKnown RBP11.57□□□□□ -0.56
TRIM35-204ENST00000521283 NCOA5Q9HCD5 579 aaKnown RBP11.57□□□□□ -0.56
TRIM35-204ENST00000521283 BRMS1Q9HCU9 246 aa11.57□□□□□ -0.56
TRIM35-204ENST00000521283 VPS54Q9P1Q0 977 aa11.57□□□□□ -0.56
TRIM35-204ENST00000521283 STXBP5LQ9Y2K9 1186 aa11.57□□□□□ -0.56
TRIM35-204ENST00000521283 MYH9P35579 1960 aaKnown RBP11.57□□□□□ -0.56
TRIM35-204ENST00000521283 ABHD14A-ACY1A0A1B0GW23 586 aa11.56□□□□□ -0.56
TRIM35-204ENST00000521283 GSTTP1A0A1W2PQM5 241 aa11.56□□□□□ -0.56
TRIM35-204ENST00000521283 RSPH10B2B2RC85 870 aa11.56□□□□□ -0.56
TRIM35-204ENST00000521283 CXCL10P02778 98 aa11.56□□□□□ -0.56
TRIM35-204ENST00000521283 OATP04181 439 aa11.56□□□□□ -0.56
TRIM35-204ENST00000521283 RSPH10BP0C881 870 aa11.56□□□□□ -0.56
TRIM35-204ENST00000521283 ACRP10323 421 aa11.56□□□□□ -0.56
TRIM35-204ENST00000521283 STAT5BP51692 787 aa11.56□□□□□ -0.56
TRIM35-204ENST00000521283 NEK4P51957 841 aa11.56□□□□□ -0.56
TRIM35-204ENST00000521283 AK2P54819 239 aa11.56□□□□□ -0.56
TRIM35-204ENST00000521283 ACTR2P61160 394 aa11.56□□□□□ -0.56
TRIM35-204ENST00000521283 SCRN1Q12765 414 aa11.56□□□□□ -0.56
TRIM35-204ENST00000521283 STK3Q13188 491 aa11.56□□□□□ -0.56
TRIM35-204ENST00000521283 UTP14CQ5TAP6 766 aaKnown RBP11.56□□□□□ -0.56
TRIM35-204ENST00000521283 MIS18BP1Q6P0N0 1132 aa11.56□□□□□ -0.56
TRIM35-204ENST00000521283 CNKSR3Q6P9H4 555 aa11.56□□□□□ -0.56
TRIM35-204ENST00000521283 OTOP2Q7RTS6 562 aa11.56□□□□□ -0.56
TRIM35-204ENST00000521283 KRT25Q7Z3Z0 450 aa11.56□□□□□ -0.56
TRIM35-204ENST00000521283 SCLYQ96I15 445 aa11.56□□□□□ -0.56
TRIM35-204ENST00000521283 CTAGE1Q96RT6 745 aa11.56□□□□□ -0.56
TRIM35-204ENST00000521283 ZNF577Q9BSK1 485 aa11.56□□□□□ -0.56
TRIM35-204ENST00000521283 PRR14Q9BWN1 585 aa11.56□□□□□ -0.56
TRIM35-204ENST00000521283 TMEM260Q9NX78 707 aa11.56□□□□□ -0.56
TRIM35-204ENST00000521283 MTMR10Q9NXD2 777 aa11.56□□□□□ -0.56
TRIM35-204ENST00000521283 TPCN1Q9ULQ1 816 aa11.56□□□□□ -0.56
TRIM35-204ENST00000521283 UMODL1Q5DID0 1318 aa11.56□□□□□ -0.56
TRIM35-204ENST00000521283 IGLV3-22A0A075B6J6 115 aa11.55□□□□□ -0.56
TRIM35-204ENST00000521283 CYP3A7-CYP3A51PA0A087WV96 503 aa11.55□□□□□ -0.56
TRIM35-204ENST00000521283 IGKV6D-21A0A0A0MT36 114 aa11.55□□□□□ -0.56
TRIM35-204ENST00000521283 ZBBXA8MT70 800 aa11.55□□□□□ -0.56
TRIM35-204ENST00000521283 FAM86B1E9PN63 330 aa11.55□□□□□ -0.56
TRIM35-204ENST00000521283 FAM86B2P0C5J1 330 aa11.55□□□□□ -0.56
TRIM35-204ENST00000521283 ARP10275 920 aa11.55□□□□□ -0.56
TRIM35-204ENST00000521283 GCFC2P16383 781 aaKnown RBP11.55□□□□□ -0.56
TRIM35-204ENST00000521283 CYP3A7P24462 503 aa11.55□□□□□ -0.56
TRIM35-204ENST00000521283 SFNP31947 248 aa11.55□□□□□ -0.56
TRIM35-204ENST00000521283 KCNJ6P48051 423 aa11.55□□□□□ -0.56
TRIM35-204ENST00000521283 ADAM17P78536 824 aa11.55□□□□□ -0.56
TRIM35-204ENST00000521283 SP4Q02446 784 aa11.55□□□□□ -0.56
TRIM35-204ENST00000521283 PPFIA1Q13136 1202 aa11.55□□□□□ -0.56
TRIM35-204ENST00000521283 IKBKEQ14164 716 aa11.55□□□□□ -0.56
TRIM35-204ENST00000521283 Q4G0T1 1027 aa11.55□□□□□ -0.56
TRIM35-204ENST00000521283 BLOC1S3Q6QNY0 202 aa11.55□□□□□ -0.56
TRIM35-204ENST00000521283 DEFB128Q7Z7B8 93 aa11.55□□□□□ -0.56
TRIM35-204ENST00000521283 METTL3Q86U44 580 aaKnown RBP11.55□□□□□ -0.56
TRIM35-204ENST00000521283 NME8Q8N427 588 aa11.55□□□□□ -0.56
TRIM35-204ENST00000521283 RDM1Q8NG50 284 aa11.55□□□□□ -0.56
TRIM35-204ENST00000521283 APBB2Q92870 758 aa11.55□□□□□ -0.56
TRIM35-204ENST00000521283 ZSCAN31Q96LW9 406 aaPredicted RBP11.55□□□□□ -0.56
TRIM35-204ENST00000521283 RIT2Q99578 217 aa11.55□□□□□ -0.56
TRIM35-204ENST00000521283 SEMA6BQ9H3T3 888 aa11.55□□□□□ -0.56
TRIM35-204ENST00000521283 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.55□□□□□ -0.56
TRIM35-204ENST00000521283 CEP131Q9UPN4 1083 aa11.55□□□□□ -0.56
TRIM35-204ENST00000521283 PCDHB3Q9Y5E6 796 aa11.55□□□□□ -0.56
TRIM35-204ENST00000521283 PCDHA11Q9Y5I1 949 aa11.55□□□□□ -0.56
TRIM35-204ENST00000521283 PCDHA10Q9Y5I2 948 aa11.55□□□□□ -0.56
TRIM35-204ENST00000521283 SQORQ9Y6N5 450 aa11.55□□□□□ -0.56
TRIM35-204ENST00000521283 SCN5AQ14524 2016 aa11.55□□□□□ -0.56
TRIM35-204ENST00000521283 COL1A2P08123 1366 aa11.54□□□□□ -0.56
TRIM35-204ENST00000521283 CCDC194A0A1B0GVG4 234 aa11.54□□□□□ -0.56
TRIM35-204ENST00000521283 MBLAC1A4D2B0 266 aaPredicted RBP11.54□□□□□ -0.56
TRIM35-204ENST00000521283 TREHO43280 583 aa11.54□□□□□ -0.56
TRIM35-204ENST00000521283 HBP1O60381 514 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms