RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 HBP1O60381 514 aa23.31■■□□□ 1.32
TRIM35-203ENST00000521253 SFNP31947 248 aa23.31■■□□□ 1.32
TRIM35-203ENST00000521253 JAK3P52333 1124 aa23.31■■□□□ 1.32
TRIM35-203ENST00000521253 SAFBQ15424 915 aaKnown RBP eCLIP23.31■■□□□ 1.32
TRIM35-203ENST00000521253 B3GNT9Q6UX72 402 aa23.31■■□□□ 1.32
TRIM35-203ENST00000521253 RPAINQ86UA6 219 aa23.31■■□□□ 1.32
TRIM35-203ENST00000521253 IGSF9BQ9UPX0 1349 aa23.31■■□□□ 1.32
TRIM35-203ENST00000521253 MCM2P49736 904 aa23.3■■□□□ 1.32
TRIM35-203ENST00000521253 TCTN1Q2MV58 587 aa23.3■■□□□ 1.32
TRIM35-203ENST00000521253 POTEDQ86YR6 584 aa23.3■■□□□ 1.32
TRIM35-203ENST00000521253 CKAP2LQ8IYA6 745 aa23.3■■□□□ 1.32
TRIM35-203ENST00000521253 DEFB123Q8N688 67 aa23.3■■□□□ 1.32
TRIM35-203ENST00000521253 FBXO18Q8NFZ0 1043 aa23.3■■□□□ 1.32
TRIM35-203ENST00000521253 DNAJB3Q8WWF6 145 aa23.3■■□□□ 1.32
TRIM35-203ENST00000521253 FAM20AQ96MK3 541 aa23.3■■□□□ 1.32
TRIM35-203ENST00000521253 TET1Q8NFU7 2136 aa23.3■■□□□ 1.32
TRIM35-203ENST00000521253 CNKSR3Q6P9H4 555 aa23.29■■□□□ 1.32
TRIM35-203ENST00000521253 TRMT1LQ7Z2T5 733 aaKnown RBP23.29■■□□□ 1.32
TRIM35-203ENST00000521253 MIER3Q7Z3K6 550 aa23.29■■□□□ 1.32
TRIM35-203ENST00000521253 RDM1Q8NG50 284 aa23.29■■□□□ 1.32
TRIM35-203ENST00000521253 BBXQ8WY36 941 aaPredicted RBP23.29■■□□□ 1.32
TRIM35-203ENST00000521253 HAS1Q92839 578 aa23.29■■□□□ 1.32
TRIM35-203ENST00000521253 OSBPL7Q9BZF2 842 aa23.29■■□□□ 1.32
TRIM35-203ENST00000521253 FAM49AQ9H0Q0 323 aaPredicted RBP23.29■■□□□ 1.32
TRIM35-203ENST00000521253 ZBTB42B2RXF5 422 aa23.28■■□□□ 1.32
TRIM35-203ENST00000521253 WNT7AO00755 349 aa23.28■■□□□ 1.32
TRIM35-203ENST00000521253 TBX3O15119 743 aa23.28■■□□□ 1.32
TRIM35-203ENST00000521253 BAIAP3O94812 1187 aa23.28■■□□□ 1.32
TRIM35-203ENST00000521253 CHRNA1P02708 482 aa23.28■■□□□ 1.32
TRIM35-203ENST00000521253 UGCGQ16739 394 aa23.28■■□□□ 1.32
TRIM35-203ENST00000521253 FAM26DQ5JW98 314 aa23.28■■□□□ 1.32
TRIM35-203ENST00000521253 MTHFD1LQ6UB35 978 aa23.28■■□□□ 1.32
TRIM35-203ENST00000521253 RSPH3Q86UC2 560 aa23.28■■□□□ 1.32
TRIM35-203ENST00000521253 PBX4Q9BYU1 374 aa23.28■■□□□ 1.32
TRIM35-203ENST00000521253 VAV3Q9UKW4 847 aa23.28■■□□□ 1.32
TRIM35-203ENST00000521253 PCDHA2Q9Y5H9 948 aa23.28■■□□□ 1.32
TRIM35-203ENST00000521253 COL1A2P08123 1366 aa23.27■■□□□ 1.32
TRIM35-203ENST00000521253 CHD9Q3L8U1 2897 aa23.27■■□□□ 1.32
TRIM35-203ENST00000521253 ZNF862O60290 1169 aa23.27■■□□□ 1.32
TRIM35-203ENST00000521253 ATP2A2P16615 1042 aaKnown RBP23.27■■□□□ 1.32
TRIM35-203ENST00000521253 DNAJB2P25686 324 aa23.27■■□□□ 1.32
TRIM35-203ENST00000521253 KLRC1P26715 233 aa23.27■■□□□ 1.32
TRIM35-203ENST00000521253 PBX2P40425 430 aa23.27■■□□□ 1.32
TRIM35-203ENST00000521253 ZNF484Q5JVG2 852 aa23.27■■□□□ 1.32
TRIM35-203ENST00000521253 ZNF697Q5TEC3 545 aa23.27■■□□□ 1.32
TRIM35-203ENST00000521253 KAT6AQ92794 2004 aa23.26■■□□□ 1.31
TRIM35-203ENST00000521253 MARCH6O60337 910 aa23.26■■□□□ 1.31
TRIM35-203ENST00000521253 OATP04181 439 aa23.26■■□□□ 1.31
TRIM35-203ENST00000521253 PRKCEQ02156 737 aa23.26■■□□□ 1.31
TRIM35-203ENST00000521253 MGAT3Q09327 533 aa23.26■■□□□ 1.31
TRIM35-203ENST00000521253 PPP2R5CQ13362 524 aa23.26■■□□□ 1.31
TRIM35-203ENST00000521253 PLEKHG4Q58EX7 1191 aa23.26■■□□□ 1.31
TRIM35-203ENST00000521253 DBF4BQ8NFT6 615 aa23.26■■□□□ 1.31
TRIM35-203ENST00000521253 FAM167AQ96KS9 214 aa23.26■■□□□ 1.31
TRIM35-203ENST00000521253 FOXP1Q9H334 677 aaPredicted RBP23.26■■□□□ 1.31
TRIM35-203ENST00000521253 SMIM35A0A1B0GVV1 85 aa23.25■■□□□ 1.31
TRIM35-203ENST00000521253 EML1O00423 815 aa23.25■■□□□ 1.31
TRIM35-203ENST00000521253 RPLP2P05387 115 aaKnown RBP23.25■■□□□ 1.31
TRIM35-203ENST00000521253 RABGGTBP53611 331 aa23.25■■□□□ 1.31
TRIM35-203ENST00000521253 WDR5P61964 334 aaKnown RBP23.25■■□□□ 1.31
TRIM35-203ENST00000521253 TIFAQ96CG3 184 aa23.25■■□□□ 1.31
TRIM35-203ENST00000521253 FAM161BQ96MY7 647 aa23.25■■□□□ 1.31
TRIM35-203ENST00000521253 SLC9A7Q96T83 725 aa23.25■■□□□ 1.31
TRIM35-203ENST00000521253 TTYH1Q9H313 450 aaPredicted RBP23.25■■□□□ 1.31
TRIM35-203ENST00000521253 MTMR10Q9NXD2 777 aa23.25■■□□□ 1.31
TRIM35-203ENST00000521253 CDH23Q9H251 3354 aa23.24■■□□□ 1.31
TRIM35-203ENST00000521253 ABHD14A-ACY1A0A1B0GW23 586 aa23.24■■□□□ 1.31
TRIM35-203ENST00000521253 C22orf31O95567 290 aa23.24■■□□□ 1.31
TRIM35-203ENST00000521253 ATP2B1P20020 1258 aa23.24■■□□□ 1.31
TRIM35-203ENST00000521253 KCNJ6P48051 423 aa23.24■■□□□ 1.31
TRIM35-203ENST00000521253 MRPS6P82932 125 aaKnown RBP23.24■■□□□ 1.31
TRIM35-203ENST00000521253 IKBKEQ14164 716 aa23.24■■□□□ 1.31
TRIM35-203ENST00000521253 SLFN12Q8IYM2 578 aa23.24■■□□□ 1.31
TRIM35-203ENST00000521253 PHOSPHO2Q8TCD6 241 aa23.24■■□□□ 1.31
TRIM35-203ENST00000521253 SEMA6BQ9H3T3 888 aa23.24■■□□□ 1.31
TRIM35-203ENST00000521253 NRBP2Q9NSY0 501 aa23.24■■□□□ 1.31
TRIM35-203ENST00000521253 CEP131Q9UPN4 1083 aa23.24■■□□□ 1.31
TRIM35-203ENST00000521253 CDY2AQ9Y6F7 541 aa23.24■■□□□ 1.31
TRIM35-203ENST00000521253 TMEM265A0A087WTH1 108 aa23.23■■□□□ 1.31
TRIM35-203ENST00000521253 KIF28PB7ZC32 967 aa23.23■■□□□ 1.31
TRIM35-203ENST00000521253 NEMFO60524 1076 aa23.23■■□□□ 1.31
TRIM35-203ENST00000521253 BAG4O95429 457 aaKnown RBP23.23■■□□□ 1.31
TRIM35-203ENST00000521253 GHRP10912 638 aa23.23■■□□□ 1.31
TRIM35-203ENST00000521253 TMEM62Q0P6H9 643 aa23.23■■□□□ 1.31
TRIM35-203ENST00000521253 RAB30Q15771 203 aa23.23■■□□□ 1.31
TRIM35-203ENST00000521253 CALCRLQ16602 461 aa23.23■■□□□ 1.31
TRIM35-203ENST00000521253 IER5Q5VY09 327 aa23.23■■□□□ 1.31
TRIM35-203ENST00000521253 NOSTRINQ8IVI9 506 aa23.23■■□□□ 1.31
TRIM35-203ENST00000521253 BANK1Q8NDB2 785 aa23.23■■□□□ 1.31
TRIM35-203ENST00000521253 SEPT8Q92599 483 aa23.23■■□□□ 1.31
TRIM35-203ENST00000521253 MSRAQ9UJ68 235 aa23.23■■□□□ 1.31
TRIM35-203ENST00000521253 YBX2Q9Y2T7 364 aaKnown RBP23.23■■□□□ 1.31
TRIM35-203ENST00000521253 KIF3AQ9Y496 699 aa23.23■■□□□ 1.31
TRIM35-203ENST00000521253 EFCAB14O75071 495 aa23.22■■□□□ 1.31
TRIM35-203ENST00000521253 GJB2P29033 226 aa23.22■■□□□ 1.31
TRIM35-203ENST00000521253 DEFB103AP81534 67 aa23.22■■□□□ 1.31
TRIM35-203ENST00000521253 SPIRE1Q08AE8 756 aa23.22■■□□□ 1.31
TRIM35-203ENST00000521253 MKRN4PQ13434 485 aaPredicted RBP23.22■■□□□ 1.31
TRIM35-203ENST00000521253 GNL2Q13823 731 aaKnown RBP23.22■■□□□ 1.31
TRIM35-203ENST00000521253 LPIN1Q14693 890 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms