RNA–Protein interactions for RNA: ENST00000520991.3

CLN8-205, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5 BASIC

Gene CLN8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-205ENST00000520991 LMCD1Q9NZU5 365 aa17.98■□□□□ 0.47
CLN8-205ENST00000520991 COG5Q9UP83 839 aa17.98■□□□□ 0.47
CLN8-205ENST00000520991 MUC3AQ02505 3323 aa17.98■□□□□ 0.47
CLN8-205ENST00000520991 IGLV3-22A0A075B6J6 115 aa17.98■□□□□ 0.47
CLN8-205ENST00000520991 ADAMTS3O15072 1205 aa17.98■□□□□ 0.47
CLN8-205ENST00000520991 EVCP57679 992 aa17.98■□□□□ 0.47
CLN8-205ENST00000520991 PDXDC2PQ6P474 469 aa17.98■□□□□ 0.47
CLN8-205ENST00000520991 ABHD15Q6UXT9 468 aa17.98■□□□□ 0.47
CLN8-205ENST00000520991 TRIM22Q8IYM9 498 aa17.98■□□□□ 0.47
CLN8-205ENST00000520991 RASGRP4Q8TDF6 673 aa17.98■□□□□ 0.47
CLN8-205ENST00000520991 SAMD11Q96NU1 681 aa17.98■□□□□ 0.47
CLN8-205ENST00000520991 ZSWIM6Q9HCJ5 1215 aa17.98■□□□□ 0.47
CLN8-205ENST00000520991 VPS54Q9P1Q0 977 aa17.98■□□□□ 0.47
CLN8-205ENST00000520991 PCDHA2Q9Y5H9 948 aa17.98■□□□□ 0.47
CLN8-205ENST00000520991 TRPV2Q9Y5S1 764 aa17.98■□□□□ 0.47
CLN8-205ENST00000520991 TNFRSF10AO00220 468 aa17.97■□□□□ 0.47
CLN8-205ENST00000520991 TMEM62Q0P6H9 643 aa17.97■□□□□ 0.47
CLN8-205ENST00000520991 TOB2Q14106 344 aaPredicted RBP17.97■□□□□ 0.47
CLN8-205ENST00000520991 PRR16Q569H4 304 aa17.97■□□□□ 0.47
CLN8-205ENST00000520991 CCDC60Q8IWA6 550 aaPredicted RBP17.97■□□□□ 0.47
CLN8-205ENST00000520991 HLA-CQ95604 372 aa17.97■□□□□ 0.47
CLN8-205ENST00000520991 UHRF1Q96T88 793 aaPredicted RBP17.97■□□□□ 0.47
CLN8-205ENST00000520991 ZNF302Q9NR11 478 aa17.97■□□□□ 0.47
CLN8-205ENST00000520991 TBC1D22BQ9NU19 505 aa17.97■□□□□ 0.47
CLN8-205ENST00000520991 TTC28Q96AY4 2481 aa17.96■□□□□ 0.47
CLN8-205ENST00000520991 IGKV6D-21A0A0A0MT36 114 aa17.96■□□□□ 0.46
CLN8-205ENST00000520991 SMIM35A0A1B0GVV1 85 aa17.96■□□□□ 0.46
CLN8-205ENST00000520991 CPLX1O14810 134 aa17.96■□□□□ 0.46
CLN8-205ENST00000520991 DHX15O43143 795 aaKnown RBP17.96■□□□□ 0.46
CLN8-205ENST00000520991 HBP1O60381 514 aa17.96■□□□□ 0.46
CLN8-205ENST00000520991 CD52P31358 61 aa17.96■□□□□ 0.46
CLN8-205ENST00000520991 EPC2Q52LR7 807 aa17.96■□□□□ 0.46
CLN8-205ENST00000520991 SWSAP1Q6NVH7 229 aa17.96■□□□□ 0.46
CLN8-205ENST00000520991 MTHFD1LQ6UB35 978 aa17.96■□□□□ 0.46
CLN8-205ENST00000520991 CKAP2LQ8IYA6 745 aa17.96■□□□□ 0.46
CLN8-205ENST00000520991 ATP8B4Q8TF62 1192 aa17.96■□□□□ 0.46
CLN8-205ENST00000520991 IL17RAQ96F46 866 aa17.96■□□□□ 0.46
CLN8-205ENST00000520991 UPF3BQ9BZI7 483 aaKnown RBP17.96■□□□□ 0.46
CLN8-205ENST00000520991 SH3GLB2Q9NR46 395 aa17.96■□□□□ 0.46
CLN8-205ENST00000520991 NLRP5P59047 1200 aa17.95■□□□□ 0.46
CLN8-205ENST00000520991 SSRP1Q08945 709 aaKnown RBP17.95■□□□□ 0.46
CLN8-205ENST00000520991 ZNF746Q6NUN9 644 aaPredicted RBP17.95■□□□□ 0.46
CLN8-205ENST00000520991 SMAP1Q8IYB5 467 aaPredicted RBP17.95■□□□□ 0.46
CLN8-205ENST00000520991 ZNF274Q96GC6 653 aaPredicted RBP17.95■□□□□ 0.46
CLN8-205ENST00000520991 TM6SF1Q9BZW5 370 aa17.95■□□□□ 0.46
CLN8-205ENST00000520991 AGO3Q9H9G7 860 aaKnown RBP17.95■□□□□ 0.46
CLN8-205ENST00000520991 SQORQ9Y6N5 450 aa17.95■□□□□ 0.46
CLN8-205ENST00000520991 COL4A6Q14031 1691 aa17.95■□□□□ 0.46
CLN8-205ENST00000520991 ENPP3O14638 875 aa17.94■□□□□ 0.46
CLN8-205ENST00000520991 PSAPP07602 524 aa17.94■□□□□ 0.46
CLN8-205ENST00000520991 KLRC1P26715 233 aa17.94■□□□□ 0.46
CLN8-205ENST00000520991 CIITAP33076 1130 aa17.94■□□□□ 0.46
CLN8-205ENST00000520991 KCNQ1P51787 676 aa17.94■□□□□ 0.46
CLN8-205ENST00000520991 KRT76Q01546 638 aa17.94■□□□□ 0.46
CLN8-205ENST00000520991 PAK2Q13177 524 aa17.94■□□□□ 0.46
CLN8-205ENST00000520991 STK3Q13188 491 aa17.94■□□□□ 0.46
CLN8-205ENST00000520991 PTPROQ16827 1216 aa17.94■□□□□ 0.46
CLN8-205ENST00000520991 ZNF484Q5JVG2 852 aa17.94■□□□□ 0.46
CLN8-205ENST00000520991 CPLX2Q6PUV4 134 aaKnown RBP17.94■□□□□ 0.46
CLN8-205ENST00000520991 TMEM192Q8IY95 271 aa17.94■□□□□ 0.46
CLN8-205ENST00000520991 NME8Q8N427 588 aa17.94■□□□□ 0.46
CLN8-205ENST00000520991 FIBCD1Q8N539 461 aa17.94■□□□□ 0.46
CLN8-205ENST00000520991 LARP6Q9BRS8 491 aaKnown RBP17.94■□□□□ 0.46
CLN8-205ENST00000520991 FTHL17Q9BXU8 183 aa17.94■□□□□ 0.46
CLN8-205ENST00000520991 CELF4Q9BZC1 486 aaKnown RBP17.94■□□□□ 0.46
CLN8-205ENST00000520991 SAMM50Q9Y512 469 aa17.94■□□□□ 0.46
CLN8-205ENST00000520991 COL1A2P08123 1366 aa17.93■□□□□ 0.46
CLN8-205ENST00000520991 DEXIO95424 95 aa17.93■□□□□ 0.46
CLN8-205ENST00000520991 BMP1P13497 986 aa17.93■□□□□ 0.46
CLN8-205ENST00000520991 CTNNB1P35222 781 aa17.93■□□□□ 0.46
CLN8-205ENST00000520991 GPM6BQ13491 265 aa17.93■□□□□ 0.46
CLN8-205ENST00000520991 TRMT1LQ7Z2T5 733 aaKnown RBP17.93■□□□□ 0.46
CLN8-205ENST00000520991 MRPL38Q96DV4 380 aaKnown RBP17.93■□□□□ 0.46
CLN8-205ENST00000520991 PDRG1Q9NUG6 133 aa17.93■□□□□ 0.46
CLN8-205ENST00000520991 PADI3Q9ULW8 664 aa17.93■□□□□ 0.46
CLN8-205ENST00000520991 GINS2Q9Y248 185 aa17.93■□□□□ 0.46
CLN8-205ENST00000520991 PCDHA10Q9Y5I2 948 aa17.93■□□□□ 0.46
CLN8-205ENST00000520991 ADGRA3Q8IWK6 1321 aa17.93■□□□□ 0.46
CLN8-205ENST00000520991 IGSF9BQ9UPX0 1349 aa17.93■□□□□ 0.46
CLN8-205ENST00000520991 H3BNC9 293 aa17.92■□□□□ 0.46
CLN8-205ENST00000520991 BBXQ8WY36 941 aaPredicted RBP17.92■□□□□ 0.46
CLN8-205ENST00000520991 LENG9Q96B70 501 aa17.92■□□□□ 0.46
CLN8-205ENST00000520991 C22orf23Q9BZE7 217 aa17.92■□□□□ 0.46
CLN8-205ENST00000520991 GABBR1Q9UBS5 961 aa17.92■□□□□ 0.46
CLN8-205ENST00000520991 PCDHA4Q9UN74 947 aa17.92■□□□□ 0.46
CLN8-205ENST00000520991 RWDD3Q9Y3V2 267 aa17.92■□□□□ 0.46
CLN8-205ENST00000520991 KDM3AQ9Y4C1 1321 aa17.92■□□□□ 0.46
CLN8-205ENST00000520991 WDR64B1ANS9 1081 aa17.91■□□□□ 0.46
CLN8-205ENST00000520991 USP11P51784 963 aa17.91■□□□□ 0.46
CLN8-205ENST00000520991 BTG3Q14201 252 aaPredicted RBP17.91■□□□□ 0.46
CLN8-205ENST00000520991 TMEM266Q2M3C6 531 aa17.91■□□□□ 0.46
CLN8-205ENST00000520991 TIGD5Q53EQ6 642 aa17.91■□□□□ 0.46
CLN8-205ENST00000520991 LINC01599Q8WXQ3 324 aa17.91■□□□□ 0.46
CLN8-205ENST00000520991 NECAB3Q96P71 396 aaPredicted RBP17.91■□□□□ 0.46
CLN8-205ENST00000520991 PPP4R2Q9NY27 417 aa17.91■□□□□ 0.46
CLN8-205ENST00000520991 MAFBQ9Y5Q3 323 aaPredicted RBP17.91■□□□□ 0.46
CLN8-205ENST00000520991 NLRC5Q86WI3 1866 aa17.9■□□□□ 0.46
CLN8-205ENST00000520991 ZBTB42B2RXF5 422 aa17.9■□□□□ 0.46
CLN8-205ENST00000520991 MSH4O15457 936 aa17.9■□□□□ 0.46
CLN8-205ENST00000520991 GAS7O60861 476 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms