RNA–Protein interactions for RNA: ENST00000520944.5

SNHG6-203, Transcript of small nucleolar RNA host gene 6, humanhuman

TSL 1 (best) BASIC

Gene SNHG6, Length 638 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG6-203ENST00000520944 ZNF302Q9NR11 478 aa23.3■■□□□ 1.32
SNHG6-203ENST00000520944 SH3GLB2Q9NR46 395 aa23.3■■□□□ 1.32
SNHG6-203ENST00000520944 VPS54Q9P1Q0 977 aa23.3■■□□□ 1.32
SNHG6-203ENST00000520944 IGKV6D-21A0A0A0MT36 114 aa23.29■■□□□ 1.32
SNHG6-203ENST00000520944 ADAMTS3O15072 1205 aa23.29■■□□□ 1.32
SNHG6-203ENST00000520944 DHX15O43143 795 aaKnown RBP23.29■■□□□ 1.32
SNHG6-203ENST00000520944 HBP1O60381 514 aa23.29■■□□□ 1.32
SNHG6-203ENST00000520944 PRR16Q569H4 304 aa23.29■■□□□ 1.32
SNHG6-203ENST00000520944 FBXO47Q5MNV8 452 aa23.29■■□□□ 1.32
SNHG6-203ENST00000520944 SWSAP1Q6NVH7 229 aa23.29■■□□□ 1.32
SNHG6-203ENST00000520944 PDXDC2PQ6P474 469 aa23.29■■□□□ 1.32
SNHG6-203ENST00000520944 CPLX2Q6PUV4 134 aaKnown RBP23.29■■□□□ 1.32
SNHG6-203ENST00000520944 TSHZ1Q6ZSZ6 1077 aa23.29■■□□□ 1.32
SNHG6-203ENST00000520944 NME8Q8N427 588 aa23.29■■□□□ 1.32
SNHG6-203ENST00000520944 FBXO22Q8NEZ5 403 aa23.29■■□□□ 1.32
SNHG6-203ENST00000520944 SP7Q8TDD2 431 aaPredicted RBP23.29■■□□□ 1.32
SNHG6-203ENST00000520944 RASGRP4Q8TDF6 673 aa23.29■■□□□ 1.32
SNHG6-203ENST00000520944 TRAPPC12Q8WVT3 735 aa23.29■■□□□ 1.32
SNHG6-203ENST00000520944 KAT6AQ92794 2004 aa23.29■■□□□ 1.32
SNHG6-203ENST00000520944 PPP4R2Q9NY27 417 aa23.29■■□□□ 1.32
SNHG6-203ENST00000520944 MTHFD1LQ6UB35 978 aa23.28■■□□□ 1.32
SNHG6-203ENST00000520944 CKAP2LQ8IYA6 745 aa23.28■■□□□ 1.32
SNHG6-203ENST00000520944 ATP8B4Q8TF62 1192 aa23.28■■□□□ 1.32
SNHG6-203ENST00000520944 SAMD11Q96NU1 681 aa23.28■■□□□ 1.32
SNHG6-203ENST00000520944 C17orf80Q9BSJ5 609 aa23.28■■□□□ 1.32
SNHG6-203ENST00000520944 UPF3BQ9BZI7 483 aaKnown RBP23.28■■□□□ 1.32
SNHG6-203ENST00000520944 PDRG1Q9NUG6 133 aa23.28■■□□□ 1.32
SNHG6-203ENST00000520944 COG5Q9UP83 839 aa23.28■■□□□ 1.32
SNHG6-203ENST00000520944 MUC3AQ02505 3323 aa23.28■■□□□ 1.32
SNHG6-203ENST00000520944 PRRC2BQ5JSZ5 2229 aaKnown RBP23.28■■□□□ 1.32
SNHG6-203ENST00000520944 TTC28Q96AY4 2481 aa23.27■■□□□ 1.32
SNHG6-203ENST00000520944 SMIM35A0A1B0GVV1 85 aa23.27■■□□□ 1.32
SNHG6-203ENST00000520944 ENPP3O14638 875 aa23.27■■□□□ 1.32
SNHG6-203ENST00000520944 KLRC1P26715 233 aa23.27■■□□□ 1.32
SNHG6-203ENST00000520944 CIITAP33076 1130 aa23.27■■□□□ 1.32
SNHG6-203ENST00000520944 TMEM62Q0P6H9 643 aa23.27■■□□□ 1.32
SNHG6-203ENST00000520944 ZNF746Q6NUN9 644 aaPredicted RBP23.27■■□□□ 1.32
SNHG6-203ENST00000520944 CCDC60Q8IWA6 550 aaPredicted RBP23.27■■□□□ 1.32
SNHG6-203ENST00000520944 SMAP1Q8IYB5 467 aaPredicted RBP23.27■■□□□ 1.32
SNHG6-203ENST00000520944 IL17RAQ96F46 866 aa23.27■■□□□ 1.32
SNHG6-203ENST00000520944 LARP6Q9BRS8 491 aaKnown RBP23.27■■□□□ 1.32
SNHG6-203ENST00000520944 TRPV2Q9Y5S1 764 aa23.27■■□□□ 1.32
SNHG6-203ENST00000520944 SQORQ9Y6N5 450 aa23.27■■□□□ 1.32
SNHG6-203ENST00000520944 PTPRSQ13332 1948 aa23.26■■□□□ 1.31
SNHG6-203ENST00000520944 PSAPP07602 524 aa23.26■■□□□ 1.31
SNHG6-203ENST00000520944 USP11P51784 963 aa23.26■■□□□ 1.31
SNHG6-203ENST00000520944 KRT76Q01546 638 aa23.26■■□□□ 1.31
SNHG6-203ENST00000520944 TFF2Q03403 129 aa23.26■■□□□ 1.31
SNHG6-203ENST00000520944 STK3Q13188 491 aa23.26■■□□□ 1.31
SNHG6-203ENST00000520944 ZNF484Q5JVG2 852 aa23.26■■□□□ 1.31
SNHG6-203ENST00000520944 HLA-CQ95604 372 aa23.26■■□□□ 1.31
SNHG6-203ENST00000520944 SAMM50Q9Y512 469 aa23.26■■□□□ 1.31
SNHG6-203ENST00000520944 PCDHA10Q9Y5I2 948 aa23.26■■□□□ 1.31
SNHG6-203ENST00000520944 DEXIO95424 95 aa23.25■■□□□ 1.31
SNHG6-203ENST00000520944 CD52P31358 61 aa23.25■■□□□ 1.31
SNHG6-203ENST00000520944 EPC2Q52LR7 807 aa23.25■■□□□ 1.31
SNHG6-203ENST00000520944 ADAMTS19Q8TE59 1207 aa23.25■■□□□ 1.31
SNHG6-203ENST00000520944 FTHL17Q9BXU8 183 aa23.25■■□□□ 1.31
SNHG6-203ENST00000520944 CELF4Q9BZC1 486 aaKnown RBP23.25■■□□□ 1.31
SNHG6-203ENST00000520944 C22orf23Q9BZE7 217 aa23.25■■□□□ 1.31
SNHG6-203ENST00000520944 TNFRSF10AO00220 468 aa23.24■■□□□ 1.31
SNHG6-203ENST00000520944 PTPROQ16827 1216 aa23.24■■□□□ 1.31
SNHG6-203ENST00000520944 ERICH6BQ5W0A0 696 aa23.24■■□□□ 1.31
SNHG6-203ENST00000520944 TMEM192Q8IY95 271 aa23.24■■□□□ 1.31
SNHG6-203ENST00000520944 FIBCD1Q8N539 461 aa23.24■■□□□ 1.31
SNHG6-203ENST00000520944 AGO3Q9H9G7 860 aaKnown RBP23.24■■□□□ 1.31
SNHG6-203ENST00000520944 PCDHA4Q9UN74 947 aa23.24■■□□□ 1.31
SNHG6-203ENST00000520944 MAFBQ9Y5Q3 323 aaPredicted RBP23.24■■□□□ 1.31
SNHG6-203ENST00000520944 COL1A2P08123 1366 aa23.24■■□□□ 1.31
SNHG6-203ENST00000520944 MICAL3Q7RTP6 2002 aa23.23■■□□□ 1.31
SNHG6-203ENST00000520944 PAK2Q13177 524 aa23.23■■□□□ 1.31
SNHG6-203ENST00000520944 TRMT1LQ7Z2T5 733 aaKnown RBP23.23■■□□□ 1.31
SNHG6-203ENST00000520944 BBXQ8WY36 941 aaPredicted RBP23.23■■□□□ 1.31
SNHG6-203ENST00000520944 UHRF1Q96T88 793 aaPredicted RBP23.23■■□□□ 1.31
SNHG6-203ENST00000520944 PADI3Q9ULW8 664 aa23.23■■□□□ 1.31
SNHG6-203ENST00000520944 CDKL5O76039 1030 aa23.22■■□□□ 1.31
SNHG6-203ENST00000520944 TBCKQ8TEA7 893 aa23.22■■□□□ 1.31
SNHG6-203ENST00000520944 GABBR1Q9UBS5 961 aa23.22■■□□□ 1.31
SNHG6-203ENST00000520944 GINS2Q9Y248 185 aa23.22■■□□□ 1.31
SNHG6-203ENST00000520944 IGSF9BQ9UPX0 1349 aa23.22■■□□□ 1.31
SNHG6-203ENST00000520944 WDR64B1ANS9 1081 aa23.21■■□□□ 1.31
SNHG6-203ENST00000520944 MSH4O15457 936 aa23.21■■□□□ 1.31
SNHG6-203ENST00000520944 BMP1P13497 986 aa23.21■■□□□ 1.31
SNHG6-203ENST00000520944 ATP4AP20648 1035 aa23.21■■□□□ 1.31
SNHG6-203ENST00000520944 GPM6BQ13491 265 aa23.21■■□□□ 1.31
SNHG6-203ENST00000520944 GALNT17Q6IS24 598 aa23.21■■□□□ 1.31
SNHG6-203ENST00000520944 KIAA0319LQ8IZA0 1049 aa23.21■■□□□ 1.31
SNHG6-203ENST00000520944 BLIDQ8IZY5 108 aa23.21■■□□□ 1.31
SNHG6-203ENST00000520944 FAM177A1Q8N128 213 aaPredicted RBP23.21■■□□□ 1.31
SNHG6-203ENST00000520944 LENG9Q96B70 501 aa23.21■■□□□ 1.31
SNHG6-203ENST00000520944 RIT2Q99578 217 aa23.21■■□□□ 1.31
SNHG6-203ENST00000520944 CEP131Q9UPN4 1083 aa23.21■■□□□ 1.31
SNHG6-203ENST00000520944 KDM3AQ9Y4C1 1321 aa23.21■■□□□ 1.31
SNHG6-203ENST00000520944 H3BNC9 293 aa23.2■■□□□ 1.3
SNHG6-203ENST00000520944 GAS7O60861 476 aa23.2■■□□□ 1.3
SNHG6-203ENST00000520944 KCNQ1P51787 676 aa23.2■■□□□ 1.3
SNHG6-203ENST00000520944 NFX1Q12986 1120 aaKnown RBP23.2■■□□□ 1.3
SNHG6-203ENST00000520944 ODR4Q5SWX8 454 aa23.2■■□□□ 1.3
SNHG6-203ENST00000520944 FAM43BQ6ZT52 329 aaPredicted RBP23.2■■□□□ 1.3
SNHG6-203ENST00000520944 METTL13Q8N6R0 699 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms