RNA–Protein interactions for RNA: ENST00000520630.1

CSMD1-209, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 312 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-209ENST00000520630 ATRXP46100 2492 aa9.28□□□□□ -0.92
CSMD1-209ENST00000520630 CNOT1A5YKK6 2376 aaKnown RBP9.28□□□□□ -0.92
CSMD1-209ENST00000520630 TTC41PQ6P2S7 1318 aa9.28□□□□□ -0.92
CSMD1-209ENST00000520630 MBLAC1A4D2B0 266 aaPredicted RBP9.27□□□□□ -0.93
CSMD1-209ENST00000520630 FGAP02671 866 aa9.27□□□□□ -0.93
CSMD1-209ENST00000520630 WEE2P0C1S8 567 aa9.27□□□□□ -0.93
CSMD1-209ENST00000520630 TGFB3P10600 412 aa9.27□□□□□ -0.93
CSMD1-209ENST00000520630 AOC1P19801 751 aa9.27□□□□□ -0.93
CSMD1-209ENST00000520630 HOXA13P31271 388 aaPredicted RBP9.27□□□□□ -0.93
CSMD1-209ENST00000520630 TSHZ1Q6ZSZ6 1077 aa9.27□□□□□ -0.93
CSMD1-209ENST00000520630 CYFIP1Q7L576 1253 aa9.27□□□□□ -0.93
CSMD1-209ENST00000520630 NPAS4Q8IUM7 802 aa9.27□□□□□ -0.93
CSMD1-209ENST00000520630 MTMR8Q96EF0 704 aa9.27□□□□□ -0.93
CSMD1-209ENST00000520630 TTC14Q96N46 770 aa9.27□□□□□ -0.93
CSMD1-209ENST00000520630 ZKSCAN3Q9BRR0 538 aa9.27□□□□□ -0.93
CSMD1-209ENST00000520630 USP26Q9BXU7 913 aa9.27□□□□□ -0.93
CSMD1-209ENST00000520630 BACH2Q9BYV9 841 aa9.27□□□□□ -0.93
CSMD1-209ENST00000520630 MLXIPQ9HAP2 919 aa9.27□□□□□ -0.93
CSMD1-209ENST00000520630 AAASQ9NRG9 546 aa9.27□□□□□ -0.93
CSMD1-209ENST00000520630 PDCD11Q14690 1871 aaKnown RBP9.27□□□□□ -0.93
CSMD1-209ENST00000520630 GREB1Q4ZG55 1949 aa9.27□□□□□ -0.93
CSMD1-209ENST00000520630 SPAG17Q6Q759 2223 aa9.27□□□□□ -0.93
CSMD1-209ENST00000520630 FAM208BQ5VWN6 2430 aa9.26□□□□□ -0.93
CSMD1-209ENST00000520630 FGF18O76093 207 aa9.26□□□□□ -0.93
CSMD1-209ENST00000520630 UBE3AQ05086 875 aa9.26□□□□□ -0.93
CSMD1-209ENST00000520630 PUM1Q14671 1186 aaKnown RBP eCLIP9.26□□□□□ -0.93
CSMD1-209ENST00000520630 GPATCH4Q5T3I0 446 aaKnown RBP9.26□□□□□ -0.93
CSMD1-209ENST00000520630 FAM102BQ5T8I3 360 aa9.26□□□□□ -0.93
CSMD1-209ENST00000520630 LLGL2Q6P1M3 1020 aa9.26□□□□□ -0.93
CSMD1-209ENST00000520630 KCNV1Q6PIU1 500 aa9.26□□□□□ -0.93
CSMD1-209ENST00000520630 LRRC55Q6ZSA7 311 aa9.26□□□□□ -0.93
CSMD1-209ENST00000520630 ZBTB33Q86T24 672 aa9.26□□□□□ -0.93
CSMD1-209ENST00000520630 MCF2L2Q86YR7 1114 aa9.26□□□□□ -0.93
CSMD1-209ENST00000520630 TBC1D10CQ8IV04 446 aa9.26□□□□□ -0.93
CSMD1-209ENST00000520630 STAG2Q8N3U4 1231 aa9.26□□□□□ -0.93
CSMD1-209ENST00000520630 DTWD2Q8NBA8 298 aa9.26□□□□□ -0.93
CSMD1-209ENST00000520630 COLGALT1Q8NBJ5 622 aa9.26□□□□□ -0.93
CSMD1-209ENST00000520630 CDCA3Q99618 268 aaPredicted RBP9.26□□□□□ -0.93
CSMD1-209ENST00000520630 TSHZ2Q9NRE2 1034 aa9.26□□□□□ -0.93
CSMD1-209ENST00000520630 LIMD1Q9UGP4 676 aa9.26□□□□□ -0.93
CSMD1-209ENST00000520630 RALYQ9UKM9 306 aaKnown RBP9.26□□□□□ -0.93
CSMD1-209ENST00000520630 PADI3Q9ULW8 664 aa9.26□□□□□ -0.93
CSMD1-209ENST00000520630 MRPL11Q9Y3B7 192 aaKnown RBP9.26□□□□□ -0.93
CSMD1-209ENST00000520630 R4GN57 208 aa9.26□□□□□ -0.93
CSMD1-209ENST00000520630 LAMA1P25391 3075 aa9.26□□□□□ -0.93
CSMD1-209ENST00000520630 NEDD4P46934 1319 aa9.26□□□□□ -0.93
CSMD1-209ENST00000520630 FRMPD4Q14CM0 1322 aa9.26□□□□□ -0.93
CSMD1-209ENST00000520630 CCDC171Q6TFL3 1326 aa9.26□□□□□ -0.93
CSMD1-209ENST00000520630 EML5Q05BV3 1969 aa9.25□□□□□ -0.93
CSMD1-209ENST00000520630 GSTTP1A0A1W2PQM5 241 aa9.25□□□□□ -0.93
CSMD1-209ENST00000520630 SPATA31C2B4DYI2 1134 aa9.25□□□□□ -0.93
CSMD1-209ENST00000520630 LMNAP02545 664 aaKnown RBP9.25□□□□□ -0.93
CSMD1-209ENST00000520630 SDSP20132 328 aa9.25□□□□□ -0.93
CSMD1-209ENST00000520630 HAND2P61296 217 aa9.25□□□□□ -0.93
CSMD1-209ENST00000520630 UTP14CQ5TAP6 766 aaKnown RBP9.25□□□□□ -0.93
CSMD1-209ENST00000520630 PLPP4Q5VZY2 271 aa9.25□□□□□ -0.93
CSMD1-209ENST00000520630 METTL7BQ6UX53 244 aa9.25□□□□□ -0.93
CSMD1-209ENST00000520630 ZDHHC14Q8IZN3 488 aa9.25□□□□□ -0.93
CSMD1-209ENST00000520630 FLCNQ8NFG4 579 aa9.25□□□□□ -0.93
CSMD1-209ENST00000520630 MICAL1Q8TDZ2 1067 aa9.25□□□□□ -0.93
CSMD1-209ENST00000520630 INPP4AQ96PE3 977 aaPredicted RBP9.25□□□□□ -0.93
CSMD1-209ENST00000520630 VAT1LQ9HCJ6 419 aa9.25□□□□□ -0.93
CSMD1-209ENST00000520630 ERVK-5Q9HDB9 667 aa9.25□□□□□ -0.93
CSMD1-209ENST00000520630 RNF19AQ9NV58 838 aa9.25□□□□□ -0.93
CSMD1-209ENST00000520630 TYW1Q9NV66 732 aaKnown RBP9.25□□□□□ -0.93
CSMD1-209ENST00000520630 NRCAMQ92823 1304 aa9.25□□□□□ -0.93
CSMD1-209ENST00000520630 FASNP49327 2511 aaKnown RBP9.25□□□□□ -0.93
CSMD1-209ENST00000520630 ATP9AO75110 1047 aa9.24□□□□□ -0.93
CSMD1-209ENST00000520630 GNAT1P11488 350 aa9.24□□□□□ -0.93
CSMD1-209ENST00000520630 SCG2P13521 617 aa9.24□□□□□ -0.93
CSMD1-209ENST00000520630 MRPS6P82932 125 aaKnown RBP9.24□□□□□ -0.93
CSMD1-209ENST00000520630 TMEM62Q0P6H9 643 aa9.24□□□□□ -0.93
CSMD1-209ENST00000520630 RSPO4Q2I0M5 234 aaPredicted RBP9.24□□□□□ -0.93
CSMD1-209ENST00000520630 ZNF589Q86UQ0 364 aaPredicted RBP9.24□□□□□ -0.93
CSMD1-209ENST00000520630 C12orf76Q8N812 135 aaPredicted RBP9.24□□□□□ -0.93
CSMD1-209ENST00000520630 SUMF1Q8NBK3 374 aa9.24□□□□□ -0.93
CSMD1-209ENST00000520630 PNMA1Q8ND90 353 aa9.24□□□□□ -0.93
CSMD1-209ENST00000520630 GPATCH3Q96I76 525 aa9.24□□□□□ -0.93
CSMD1-209ENST00000520630 ADAM7Q9H2U9 754 aa9.24□□□□□ -0.93
CSMD1-209ENST00000520630 CDHR5Q9HBB8 845 aa9.24□□□□□ -0.93
CSMD1-209ENST00000520630 TOMM22Q9NS69 142 aa9.24□□□□□ -0.93
CSMD1-209ENST00000520630 TMEM260Q9NX78 707 aa9.24□□□□□ -0.93
CSMD1-209ENST00000520630 NR2E1Q9Y466 385 aa9.24□□□□□ -0.93
CSMD1-209ENST00000520630 HCFC2Q9Y5Z7 792 aa9.24□□□□□ -0.93
CSMD1-209ENST00000520630 IGSF9BQ9UPX0 1349 aa9.24□□□□□ -0.93
CSMD1-209ENST00000520630 NBEAQ8NFP9 2946 aa9.24□□□□□ -0.93
CSMD1-209ENST00000520630 TRIP11Q15643 1979 aa9.23□□□□□ -0.93
CSMD1-209ENST00000520630 A0A0D9SFI3 127 aa9.23□□□□□ -0.93
CSMD1-209ENST00000520630 KRBA1A5PL33 1030 aa9.23□□□□□ -0.93
CSMD1-209ENST00000520630 NARSO43776 548 aaKnown RBP9.23□□□□□ -0.93
CSMD1-209ENST00000520630 SEC24BO95487 1268 aa9.23□□□□□ -0.93
CSMD1-209ENST00000520630 HOXB8P17481 243 aaPredicted RBP9.23□□□□□ -0.93
CSMD1-209ENST00000520630 CCND2P30279 289 aa9.23□□□□□ -0.93
CSMD1-209ENST00000520630 PBX3P40426 434 aa9.23□□□□□ -0.93
CSMD1-209ENST00000520630 SARSP49591 514 aaKnown RBP9.23□□□□□ -0.93
CSMD1-209ENST00000520630 PLCB3Q01970 1234 aa9.23□□□□□ -0.93
CSMD1-209ENST00000520630 GRIK4Q16099 956 aa9.23□□□□□ -0.93
CSMD1-209ENST00000520630 TMEM266Q2M3C6 531 aa9.23□□□□□ -0.93
CSMD1-209ENST00000520630 TAF2Q6P1X5 1199 aa9.23□□□□□ -0.93
CSMD1-209ENST00000520630 DGKHQ86XP1 1220 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms