RNA–Protein interactions for RNA: ENST00000520580.5

SREK1-208, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 2

Gene SREK1, Length 2,369 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-208ENST00000520580 PTCHD1Q96NR3 888 aa4.42□□□□□ -1.7
SREK1-208ENST00000520580 NT5C1BQ96P26 610 aa4.42□□□□□ -1.7
SREK1-208ENST00000520580 WDR12Q9GZL7 423 aaKnown RBP4.42□□□□□ -1.7
SREK1-208ENST00000520580 MRPL18Q9H0U6 180 aaKnown RBP4.42□□□□□ -1.7
SREK1-208ENST00000520580 CERS4Q9HA82 394 aa4.42□□□□□ -1.7
SREK1-208ENST00000520580 ARFGAP3Q9NP61 516 aa4.42□□□□□ -1.7
SREK1-208ENST00000520580 MARCH2Q9P0N8 246 aa4.42□□□□□ -1.7
SREK1-208ENST00000520580 RASA4BC9J798 803 aa4.42□□□□□ -1.7
SREK1-208ENST00000520580 RASA4O43374 803 aa4.42□□□□□ -1.7
SREK1-208ENST00000520580 NCK2O43639 380 aa4.42□□□□□ -1.7
SREK1-208ENST00000520580 ZNF500O60304 480 aaPredicted RBP4.42□□□□□ -1.7
SREK1-208ENST00000520580 TBC1D8O95759 1140 aa4.42□□□□□ -1.7
SREK1-208ENST00000520580 FAM87AP0C7U9 286 aa4.42□□□□□ -1.7
SREK1-208ENST00000520580 TNFAIP3P21580 790 aa4.42□□□□□ -1.7
SREK1-208ENST00000520580 TNFSF4P23510 183 aa4.42□□□□□ -1.7
SREK1-208ENST00000520580 CD40P25942 277 aa4.42□□□□□ -1.7
SREK1-208ENST00000520580 RPL11P62913 178 aaKnown RBP4.42□□□□□ -1.7
SREK1-208ENST00000520580 CDK17Q00537 523 aa4.42□□□□□ -1.7
SREK1-208ENST00000520580 SRSF11Q05519 484 aaKnown RBP4.42□□□□□ -1.7
SREK1-208ENST00000520580 CNN3Q15417 329 aaKnown RBP4.42□□□□□ -1.7
SREK1-208ENST00000520580 GPR19Q15760 415 aa4.42□□□□□ -1.7
SREK1-208ENST00000520580 GRIK4Q16099 956 aa4.42□□□□□ -1.7
SREK1-208ENST00000520580 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.42□□□□□ -1.7
SREK1-208ENST00000520580 HHIPL2Q6UWX4 724 aa4.42□□□□□ -1.7
SREK1-208ENST00000520580 MAATS1Q7Z4T9 603 aa4.42□□□□□ -1.7
SREK1-208ENST00000520580 THEMISQ8N1K5 641 aaPredicted RBP4.42□□□□□ -1.7
SREK1-208ENST00000520580 ATXN2LQ8WWM7 1075 aaKnown RBP4.42□□□□□ -1.7
SREK1-208ENST00000520580 DPF3Q92784 378 aa4.42□□□□□ -1.7
SREK1-208ENST00000520580 TRIM63Q969Q1 353 aa4.42□□□□□ -1.7
SREK1-208ENST00000520580 COA7Q96BR5 231 aa4.42□□□□□ -1.7
SREK1-208ENST00000520580 ACAP3Q96P50 834 aa4.42□□□□□ -1.7
SREK1-208ENST00000520580 IRX2Q9BZI1 471 aaPredicted RBP4.42□□□□□ -1.7
SREK1-208ENST00000520580 ZNF277Q9NRM2 450 aaPredicted RBP4.42□□□□□ -1.7
SREK1-208ENST00000520580 C1GALT1Q9NS00 363 aa4.42□□□□□ -1.7
SREK1-208ENST00000520580 LIMCH1Q9UPQ0 1083 aa4.42□□□□□ -1.7
SREK1-208ENST00000520580 LRCH1Q9Y2L9 728 aa4.42□□□□□ -1.7
SREK1-208ENST00000520580 ZNF281Q9Y2X9 895 aa4.42□□□□□ -1.7
SREK1-208ENST00000520580 SETD1BQ9UPS6 1966 aaKnown RBP4.42□□□□□ -1.7
SREK1-208ENST00000520580 SSU72P8A0A1W2PR75 194 aa4.41□□□□□ -1.7
SREK1-208ENST00000520580 CFAP69A5D8W1 941 aa4.41□□□□□ -1.7
SREK1-208ENST00000520580 H3BML4 177 aa4.41□□□□□ -1.7
SREK1-208ENST00000520580 FGF10O15520 208 aaPredicted RBP4.41□□□□□ -1.7
SREK1-208ENST00000520580 OIP5O43482 229 aa4.41□□□□□ -1.7
SREK1-208ENST00000520580 HTR1BP28222 390 aa4.41□□□□□ -1.7
SREK1-208ENST00000520580 KRT72Q14CN4 511 aa4.41□□□□□ -1.7
SREK1-208ENST00000520580 UGT8Q16880 541 aa4.41□□□□□ -1.7
SREK1-208ENST00000520580 ANO4Q32M45 955 aa4.41□□□□□ -1.7
SREK1-208ENST00000520580 PITRM1Q5JRX3 1037 aa4.41□□□□□ -1.7
SREK1-208ENST00000520580 CDKAL1Q5VV42 579 aa4.41□□□□□ -1.7
SREK1-208ENST00000520580 JAKMIP3Q5VZ66 844 aa4.41□□□□□ -1.7
SREK1-208ENST00000520580 GGT6Q6P531 493 aa4.41□□□□□ -1.7
SREK1-208ENST00000520580 IGF2-ASQ6U949 168 aa4.41□□□□□ -1.7
SREK1-208ENST00000520580 GPR155Q7Z3F1 870 aa4.41□□□□□ -1.7
SREK1-208ENST00000520580 CXorf67Q86X51 503 aaPredicted RBP4.41□□□□□ -1.7
SREK1-208ENST00000520580 LIX1LQ8IVB5 337 aa4.41□□□□□ -1.7
SREK1-208ENST00000520580 PIP4K2CQ8TBX8 421 aa4.41□□□□□ -1.7
SREK1-208ENST00000520580 SKA1Q96BD8 255 aa4.41□□□□□ -1.7
SREK1-208ENST00000520580 C1GALT1C1Q96EU7 318 aa4.41□□□□□ -1.7
SREK1-208ENST00000520580 MTA3Q9BTC8 594 aa4.41□□□□□ -1.7
SREK1-208ENST00000520580 TMEM60Q9H2L4 133 aa4.41□□□□□ -1.7
SREK1-208ENST00000520580 RRN3Q9NYV6 651 aa4.41□□□□□ -1.7
SREK1-208ENST00000520580 L1RE1Q9UN81 338 aa4.41□□□□□ -1.7
SREK1-208ENST00000520580 PRSS47A8MTI9 375 aa4.41□□□□□ -1.7
SREK1-208ENST00000520580 GOLIM4O00461 696 aa4.41□□□□□ -1.7
SREK1-208ENST00000520580 ZNF205O95201 554 aa4.41□□□□□ -1.7
SREK1-208ENST00000520580 MAN1A1P33908 653 aa4.41□□□□□ -1.7
SREK1-208ENST00000520580 PPM1AP35813 382 aa4.41□□□□□ -1.7
SREK1-208ENST00000520580 MAPK10P53779 464 aa4.41□□□□□ -1.7
SREK1-208ENST00000520580 KRT76Q01546 638 aa4.41□□□□□ -1.7
SREK1-208ENST00000520580 PUM3Q15397 648 aaKnown RBP4.41□□□□□ -1.7
SREK1-208ENST00000520580 KCNK18Q7Z418 384 aa4.41□□□□□ -1.7
SREK1-208ENST00000520580 MFSD4AQ8N468 514 aa4.41□□□□□ -1.7
SREK1-208ENST00000520580 USHBP1Q8N6Y0 703 aa4.41□□□□□ -1.7
SREK1-208ENST00000520580 PDILTQ8N807 584 aa4.41□□□□□ -1.7
SREK1-208ENST00000520580 DEPTORQ8TB45 409 aa4.41□□□□□ -1.7
SREK1-208ENST00000520580 TRIM11Q96F44 468 aa4.41□□□□□ -1.7
SREK1-208ENST00000520580 CGRRF1Q99675 332 aa4.41□□□□□ -1.7
SREK1-208ENST00000520580 PRDM12Q9H4Q4 367 aa4.41□□□□□ -1.7
SREK1-208ENST00000520580 ARMT1Q9H993 441 aa4.41□□□□□ -1.7
SREK1-208ENST00000520580 DMRT3Q9NQL9 472 aa4.41□□□□□ -1.7
SREK1-208ENST00000520580 DPP7Q9UHL4 492 aa4.41□□□□□ -1.7
SREK1-208ENST00000520580 SNX13Q9Y5W8 968 aa4.41□□□□□ -1.7
SREK1-208ENST00000520580 RHPN2P1A8MT19 583 aa4.4□□□□□ -1.7
SREK1-208ENST00000520580 PRRT4C9JH25 899 aa4.4□□□□□ -1.7
SREK1-208ENST00000520580 HRGP04196 525 aa4.4□□□□□ -1.7
SREK1-208ENST00000520580 MANFP55145 182 aaKnown RBP4.4□□□□□ -1.7
SREK1-208ENST00000520580 PCBP3P57721 371 aaKnown RBP4.4□□□□□ -1.7
SREK1-208ENST00000520580 SPIRE1Q08AE8 756 aa4.4□□□□□ -1.7
SREK1-208ENST00000520580 TUSC3Q13454 348 aa4.4□□□□□ -1.7
SREK1-208ENST00000520580 NFKBIBQ15653 356 aa4.4□□□□□ -1.7
SREK1-208ENST00000520580 CCDC157Q569K6 752 aa4.4□□□□□ -1.7
SREK1-208ENST00000520580 ZBTB41Q5SVQ8 909 aa4.4□□□□□ -1.7
SREK1-208ENST00000520580 L1TD1Q5T7N2 865 aaKnown RBP4.4□□□□□ -1.7
SREK1-208ENST00000520580 PPHLN1Q8NEY8 458 aaKnown RBP4.4□□□□□ -1.7
SREK1-208ENST00000520580 HEXIM2Q96MH2 286 aaKnown RBP4.4□□□□□ -1.7
SREK1-208ENST00000520580 MYLK2Q9H1R3 596 aa4.4□□□□□ -1.7
SREK1-208ENST00000520580 NXF1Q9UBU9 619 aaKnown RBP4.4□□□□□ -1.7
SREK1-208ENST00000520580 DSEQ9UL01 958 aa4.4□□□□□ -1.7
SREK1-208ENST00000520580 PCDHGB2Q9Y5G2 931 aa4.4□□□□□ -1.7
SREK1-208ENST00000520580 TRBV23OR9-2A0A075B6M9 112 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms