RNA–Protein interactions for RNA: ENST00000519774.5

HPS4-218, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-218ENST00000519774 MTMR9Q96QG7 549 aa13.32□□□□□ -0.28
HPS4-218ENST00000519774 CTAGE1Q96RT6 745 aa13.32□□□□□ -0.28
HPS4-218ENST00000519774 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.32□□□□□ -0.28
HPS4-218ENST00000519774 MAFBQ9Y5Q3 323 aaPredicted RBP13.32□□□□□ -0.28
HPS4-218ENST00000519774 NRCAMQ92823 1304 aa13.32□□□□□ -0.28
HPS4-218ENST00000519774 TANC1Q9C0D5 1861 aa13.31□□□□□ -0.28
HPS4-218ENST00000519774 ZNF862O60290 1169 aa13.31□□□□□ -0.28
HPS4-218ENST00000519774 HBP1O60381 514 aa13.31□□□□□ -0.28
HPS4-218ENST00000519774 TIMP1P01033 207 aa13.31□□□□□ -0.28
HPS4-218ENST00000519774 ATP4AP20648 1035 aa13.31□□□□□ -0.28
HPS4-218ENST00000519774 HOXC8P31273 242 aa13.31□□□□□ -0.28
HPS4-218ENST00000519774 CCL23P55773 120 aa13.31□□□□□ -0.28
HPS4-218ENST00000519774 CYP4A11Q02928 519 aa13.31□□□□□ -0.28
HPS4-218ENST00000519774 PTK7Q13308 1070 aa13.31□□□□□ -0.28
HPS4-218ENST00000519774 FAM173BQ6P4H8 233 aa13.31□□□□□ -0.28
HPS4-218ENST00000519774 DHX38Q92620 1227 aaKnown RBP13.31□□□□□ -0.28
HPS4-218ENST00000519774 TNPO1Q92973 898 aaKnown RBP13.31□□□□□ -0.28
HPS4-218ENST00000519774 WNT8BQ93098 351 aa13.31□□□□□ -0.28
HPS4-218ENST00000519774 ZBTB10Q96DT7 871 aa13.31□□□□□ -0.28
HPS4-218ENST00000519774 DYDC2Q96IM9 177 aa13.31□□□□□ -0.28
HPS4-218ENST00000519774 FAM167AQ96KS9 214 aa13.31□□□□□ -0.28
HPS4-218ENST00000519774 TUBE1Q9UJT0 475 aa13.31□□□□□ -0.28
HPS4-218ENST00000519774 MYH15Q9Y2K3 1946 aa13.31□□□□□ -0.28
HPS4-218ENST00000519774 RRN3P2A6NIE6 340 aa13.3□□□□□ -0.28
HPS4-218ENST00000519774 OATP04181 439 aa13.3□□□□□ -0.28
HPS4-218ENST00000519774 TECP42680 631 aa13.3□□□□□ -0.28
HPS4-218ENST00000519774 PSMC5P62195 406 aa13.3□□□□□ -0.28
HPS4-218ENST00000519774 BFSP2Q13515 415 aa13.3□□□□□ -0.28
HPS4-218ENST00000519774 EPHA7Q15375 998 aa13.3□□□□□ -0.28
HPS4-218ENST00000519774 SERINC5Q86VE9 423 aa13.3□□□□□ -0.28
HPS4-218ENST00000519774 IFNLR1Q8IU57 520 aaPredicted RBP13.3□□□□□ -0.28
HPS4-218ENST00000519774 C4orf32Q8N8J7 132 aa13.3□□□□□ -0.28
HPS4-218ENST00000519774 BBXQ8WY36 941 aaPredicted RBP13.3□□□□□ -0.28
HPS4-218ENST00000519774 EIF2AK1Q9BQI3 630 aaKnown RBP13.3□□□□□ -0.28
HPS4-218ENST00000519774 LXNQ9BS40 222 aa13.3□□□□□ -0.28
HPS4-218ENST00000519774 WNT8AQ9H1J5 351 aa13.3□□□□□ -0.28
HPS4-218ENST00000519774 RGL1Q9NZL6 768 aa13.3□□□□□ -0.28
HPS4-218ENST00000519774 SEPT9Q9UHD8 586 aaPredicted RBP13.3□□□□□ -0.28
HPS4-218ENST00000519774 TMEM150BA6NC51 233 aa13.29□□□□□ -0.28
HPS4-218ENST00000519774 LAD1O00515 517 aa13.29□□□□□ -0.28
HPS4-218ENST00000519774 CTSHP09668 335 aa13.29□□□□□ -0.28
HPS4-218ENST00000519774 QARSP47897 775 aaKnown RBP13.29□□□□□ -0.28
HPS4-218ENST00000519774 ADAM17P78536 824 aa13.29□□□□□ -0.28
HPS4-218ENST00000519774 ATP2C1P98194 919 aaPredicted RBP13.29□□□□□ -0.28
HPS4-218ENST00000519774 FPGSQ05932 587 aa13.29□□□□□ -0.28
HPS4-218ENST00000519774 CTTNQ14247 550 aaKnown RBP13.29□□□□□ -0.28
HPS4-218ENST00000519774 XKR3Q5GH77 459 aa13.29□□□□□ -0.28
HPS4-218ENST00000519774 ZNF484Q5JVG2 852 aa13.29□□□□□ -0.28
HPS4-218ENST00000519774 MFSD5Q6N075 450 aa13.29□□□□□ -0.28
HPS4-218ENST00000519774 RUFY4Q6ZNE9 571 aa13.29□□□□□ -0.28
HPS4-218ENST00000519774 TMEM199Q8N511 208 aa13.29□□□□□ -0.28
HPS4-218ENST00000519774 RETREG2Q8NC44 543 aa13.29□□□□□ -0.28
HPS4-218ENST00000519774 CAGE1Q8TC20 777 aa13.29□□□□□ -0.28
HPS4-218ENST00000519774 SCLYQ96I15 445 aa13.29□□□□□ -0.28
HPS4-218ENST00000519774 FTOQ9C0B1 505 aaKnown RBP eCLIP13.29□□□□□ -0.28
HPS4-218ENST00000519774 FAM49AQ9H0Q0 323 aaPredicted RBP13.29□□□□□ -0.28
HPS4-218ENST00000519774 ZSCAN16Q9H4T2 348 aaPredicted RBP13.29□□□□□ -0.28
HPS4-218ENST00000519774 NRBP2Q9NSY0 501 aa13.29□□□□□ -0.28
HPS4-218ENST00000519774 COL1A2P08123 1366 aa13.29□□□□□ -0.28
HPS4-218ENST00000519774 SCN5AQ14524 2016 aa13.29□□□□□ -0.28
HPS4-218ENST00000519774 DDX11L8A8MPP1 907 aa13.28□□□□□ -0.28
HPS4-218ENST00000519774 DKC1O60832 514 aaKnown RBP eCLIP13.28□□□□□ -0.28
HPS4-218ENST00000519774 P4HBP07237 508 aaKnown RBP13.28□□□□□ -0.28
HPS4-218ENST00000519774 ZSCAN22P10073 491 aaPredicted RBP13.28□□□□□ -0.28
HPS4-218ENST00000519774 CSF2RAP15509 400 aa13.28□□□□□ -0.28
HPS4-218ENST00000519774 THPOP40225 353 aa13.28□□□□□ -0.28
HPS4-218ENST00000519774 PRPHP41219 470 aa13.28□□□□□ -0.28
HPS4-218ENST00000519774 CEBPZQ03701 1054 aaKnown RBP13.28□□□□□ -0.28
HPS4-218ENST00000519774 PKP1Q13835 747 aa13.28□□□□□ -0.28
HPS4-218ENST00000519774 SF3A1Q15459 793 aaKnown RBP13.28□□□□□ -0.28
HPS4-218ENST00000519774 TRIM71Q2Q1W2 868 aaKnown RBP13.28□□□□□ -0.28
HPS4-218ENST00000519774 FOXD4L6Q3SYB3 417 aaPredicted RBP13.28□□□□□ -0.28
HPS4-218ENST00000519774 MTERF2Q49AM1 385 aa13.28□□□□□ -0.28
HPS4-218ENST00000519774 MARCH8Q5T0T0 291 aa13.28□□□□□ -0.28
HPS4-218ENST00000519774 PLA2G4FQ68DD2 849 aa13.28□□□□□ -0.28
HPS4-218ENST00000519774 MTHFD1LQ6UB35 978 aa13.28□□□□□ -0.28
HPS4-218ENST00000519774 FOXD4L3Q6VB84 417 aaPredicted RBP13.28□□□□□ -0.28
HPS4-218ENST00000519774 TPH2Q8IWU9 490 aa13.28□□□□□ -0.28
HPS4-218ENST00000519774 ERMNQ8TAM6 284 aa13.28□□□□□ -0.28
HPS4-218ENST00000519774 GDF15Q99988 308 aa13.28□□□□□ -0.28
HPS4-218ENST00000519774 SH2D3AQ9BRG2 576 aa13.28□□□□□ -0.28
HPS4-218ENST00000519774 UBE2OQ9C0C9 1292 aaKnown RBP13.28□□□□□ -0.28
HPS4-218ENST00000519774 WRAP73Q9P2S5 460 aaPredicted RBP13.28□□□□□ -0.28
HPS4-218ENST00000519774 ARID2Q68CP9 1835 aa13.27□□□□□ -0.28
HPS4-218ENST00000519774 MBLAC1A4D2B0 266 aaPredicted RBP13.27□□□□□ -0.29
HPS4-218ENST00000519774 VWA3AA6NCI4 1184 aa13.27□□□□□ -0.29
HPS4-218ENST00000519774 ZBTB42B2RXF5 422 aa13.27□□□□□ -0.29
HPS4-218ENST00000519774 BMP15O95972 392 aa13.27□□□□□ -0.29
HPS4-218ENST00000519774 F13A1P00488 732 aa13.27□□□□□ -0.29
HPS4-218ENST00000519774 CKBP12277 381 aa13.27□□□□□ -0.29
HPS4-218ENST00000519774 PDIA4P13667 645 aaKnown RBP13.27□□□□□ -0.29
HPS4-218ENST00000519774 SELPP16109 830 aa13.27□□□□□ -0.29
HPS4-218ENST00000519774 KLRC1P26715 233 aa13.27□□□□□ -0.29
HPS4-218ENST00000519774 RBL2Q08999 1139 aa13.27□□□□□ -0.29
HPS4-218ENST00000519774 PPIGQ13427 754 aaKnown RBP eCLIP13.27□□□□□ -0.292e-8■■□□□ 13.2
HPS4-218ENST00000519774 ZNF618Q5T7W0 954 aa13.27□□□□□ -0.29
HPS4-218ENST00000519774 TAF2Q6P1X5 1199 aa13.27□□□□□ -0.29
HPS4-218ENST00000519774 DTHD1Q6ZMT9 781 aa13.27□□□□□ -0.29
HPS4-218ENST00000519774 LRRC8DQ7L1W4 858 aa13.27□□□□□ -0.29
HPS4-218ENST00000519774 NEK9Q8TD19 979 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms