RNA–Protein interactions for RNA: ENST00000519661.5

SPIDR-212, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,035 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-212ENST00000519661 EPHA7Q15375 998 aa12.99□□□□□ -0.33
SPIDR-212ENST00000519661 RILPL1Q5EBL4 403 aa12.99□□□□□ -0.33
SPIDR-212ENST00000519661 TMEM240Q5SV17 173 aa12.99□□□□□ -0.33
SPIDR-212ENST00000519661 UTP14CQ5TAP6 766 aaKnown RBP12.99□□□□□ -0.33
SPIDR-212ENST00000519661 SWSAP1Q6NVH7 229 aa12.99□□□□□ -0.33
SPIDR-212ENST00000519661 PDXDC2PQ6P474 469 aa12.99□□□□□ -0.33
SPIDR-212ENST00000519661 LRRC8DQ7L1W4 858 aa12.99□□□□□ -0.33
SPIDR-212ENST00000519661 RPUSD2Q8IZ73 545 aaKnown RBP12.99□□□□□ -0.33
SPIDR-212ENST00000519661 NEK9Q8TD19 979 aa12.99□□□□□ -0.33
SPIDR-212ENST00000519661 TUBE1Q9UJT0 475 aa12.99□□□□□ -0.33
SPIDR-212ENST00000519661 CEP131Q9UPN4 1083 aa12.99□□□□□ -0.33
SPIDR-212ENST00000519661 EML1O00423 815 aa12.98□□□□□ -0.33
SPIDR-212ENST00000519661 C22orf31O95567 290 aa12.98□□□□□ -0.33
SPIDR-212ENST00000519661 OATP04181 439 aa12.98□□□□□ -0.33
SPIDR-212ENST00000519661 MUTP22033 750 aa12.98□□□□□ -0.33
SPIDR-212ENST00000519661 PRPHP41219 470 aa12.98□□□□□ -0.33
SPIDR-212ENST00000519661 FXR2P51116 673 aaKnown RBP eCLIP12.98□□□□□ -0.33
SPIDR-212ENST00000519661 ZNF200P98182 395 aaPredicted RBP12.98□□□□□ -0.33
SPIDR-212ENST00000519661 GUCY1B3Q02153 619 aa12.98□□□□□ -0.33
SPIDR-212ENST00000519661 MGAT3Q09327 533 aa12.98□□□□□ -0.33
SPIDR-212ENST00000519661 XKR3Q5GH77 459 aa12.98□□□□□ -0.33
SPIDR-212ENST00000519661 BRAPQ7Z569 592 aa12.98□□□□□ -0.33
SPIDR-212ENST00000519661 C4orf19Q8IY42 314 aa12.98□□□□□ -0.33
SPIDR-212ENST00000519661 NME8Q8N427 588 aa12.98□□□□□ -0.33
SPIDR-212ENST00000519661 PPP1R12CQ9BZL4 782 aa12.98□□□□□ -0.33
SPIDR-212ENST00000519661 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.98□□□□□ -0.33
SPIDR-212ENST00000519661 PCDHA12Q9UN75 941 aa12.98□□□□□ -0.33
SPIDR-212ENST00000519661 NOD1Q9Y239 953 aa12.98□□□□□ -0.33
SPIDR-212ENST00000519661 DDX39AO00148 427 aaKnown RBP12.97□□□□□ -0.33
SPIDR-212ENST00000519661 BACH1O14867 736 aa12.97□□□□□ -0.33
SPIDR-212ENST00000519661 MAGEB2O15479 319 aa12.97□□□□□ -0.33
SPIDR-212ENST00000519661 DKC1O60832 514 aaKnown RBP eCLIP12.97□□□□□ -0.33
SPIDR-212ENST00000519661 NBNO60934 754 aa12.97□□□□□ -0.33
SPIDR-212ENST00000519661 BAIAP3O94812 1187 aa12.97□□□□□ -0.33
SPIDR-212ENST00000519661 BAG4O95429 457 aaKnown RBP12.97□□□□□ -0.33
SPIDR-212ENST00000519661 P4HBP07237 508 aaKnown RBP12.97□□□□□ -0.33
SPIDR-212ENST00000519661 QARSP47897 775 aaKnown RBP12.97□□□□□ -0.33
SPIDR-212ENST00000519661 FXR1P51114 621 aaKnown RBP eCLIP12.97□□□□□ -0.33
SPIDR-212ENST00000519661 PSMC5P62195 406 aa12.97□□□□□ -0.33
SPIDR-212ENST00000519661 PRKCEQ02156 737 aa12.97□□□□□ -0.33
SPIDR-212ENST00000519661 PDIA5Q14554 519 aa12.97□□□□□ -0.33
SPIDR-212ENST00000519661 SHHQ15465 462 aa12.97□□□□□ -0.33
SPIDR-212ENST00000519661 CALCRLQ16602 461 aa12.97□□□□□ -0.33
SPIDR-212ENST00000519661 UGCGQ16739 394 aa12.97□□□□□ -0.33
SPIDR-212ENST00000519661 TTC38Q5R3I4 469 aa12.97□□□□□ -0.33
SPIDR-212ENST00000519661 C9orf50Q5SZB4 431 aa12.97□□□□□ -0.33
SPIDR-212ENST00000519661 ZNF618Q5T7W0 954 aa12.97□□□□□ -0.33
SPIDR-212ENST00000519661 LARP1BQ659C4 914 aaKnown RBP12.97□□□□□ -0.33
SPIDR-212ENST00000519661 MTHFD1LQ6UB35 978 aa12.97□□□□□ -0.33
SPIDR-212ENST00000519661 MIER3Q7Z3K6 550 aa12.97□□□□□ -0.33
SPIDR-212ENST00000519661 RETREG2Q8NC44 543 aa12.97□□□□□ -0.33
SPIDR-212ENST00000519661 GJA10Q969M2 543 aa12.97□□□□□ -0.33
SPIDR-212ENST00000519661 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.97□□□□□ -0.332e-7■■□□□ 11.4
SPIDR-212ENST00000519661 TMEM60Q9H2L4 133 aa12.97□□□□□ -0.33
SPIDR-212ENST00000519661 GABBR1Q9UBS5 961 aa12.97□□□□□ -0.33
SPIDR-212ENST00000519661 NOL7Q9UMY1 257 aaKnown RBP12.97□□□□□ -0.33
SPIDR-212ENST00000519661 SZT2Q5T011 3432 aa12.97□□□□□ -0.33
SPIDR-212ENST00000519661 EFCAB14O75071 495 aa12.96□□□□□ -0.33
SPIDR-212ENST00000519661 XRCC6P12956 609 aaKnown RBP eCLIP12.96□□□□□ -0.33
SPIDR-212ENST00000519661 MARK3P27448 753 aa12.96□□□□□ -0.33
SPIDR-212ENST00000519661 SMAD3P84022 425 aaKnown RBP12.96□□□□□ -0.33
SPIDR-212ENST00000519661 PLEKHG4Q58EX7 1191 aa12.96□□□□□ -0.33
SPIDR-212ENST00000519661 FAM109BQ6ICB4 259 aaPredicted RBP12.96□□□□□ -0.33
SPIDR-212ENST00000519661 KCTD17Q8N5Z5 321 aa12.96□□□□□ -0.33
SPIDR-212ENST00000519661 IGSF22Q8N9C0 903 aa12.96□□□□□ -0.33
SPIDR-212ENST00000519661 USP38Q8NB14 1042 aa12.96□□□□□ -0.33
SPIDR-212ENST00000519661 PPP1R13LQ8WUF5 828 aa12.96□□□□□ -0.33
SPIDR-212ENST00000519661 TTC12Q9H892 705 aaPredicted RBP12.96□□□□□ -0.33
SPIDR-212ENST00000519661 NRBP2Q9NSY0 501 aa12.96□□□□□ -0.33
SPIDR-212ENST00000519661 TRPC6Q9Y210 931 aa12.96□□□□□ -0.33
SPIDR-212ENST00000519661 TMEM265A0A087WTH1 108 aa12.95□□□□□ -0.34
SPIDR-212ENST00000519661 RSPH10B2B2RC85 870 aa12.95□□□□□ -0.34
SPIDR-212ENST00000519661 SLITRK3O94933 977 aa12.95□□□□□ -0.34
SPIDR-212ENST00000519661 CHRNA1P02708 482 aa12.95□□□□□ -0.34
SPIDR-212ENST00000519661 OR52Z1P0C646 297 aa12.95□□□□□ -0.34
SPIDR-212ENST00000519661 RSPH10BP0C881 870 aa12.95□□□□□ -0.34
SPIDR-212ENST00000519661 SYT1P21579 422 aa12.95□□□□□ -0.34
SPIDR-212ENST00000519661 CCL23P55773 120 aa12.95□□□□□ -0.34
SPIDR-212ENST00000519661 ATP2C1P98194 919 aaPredicted RBP12.95□□□□□ -0.34
SPIDR-212ENST00000519661 ARL6IP4Q66PJ3 421 aaKnown RBP12.95□□□□□ -0.34
SPIDR-212ENST00000519661 RUFY4Q6ZNE9 571 aa12.95□□□□□ -0.34
SPIDR-212ENST00000519661 ZNF365Q70YC5 407 aa12.95□□□□□ -0.34
SPIDR-212ENST00000519661 ANO5Q75V66 913 aa12.95□□□□□ -0.34
SPIDR-212ENST00000519661 RSPH3Q86UC2 560 aa12.95□□□□□ -0.34
SPIDR-212ENST00000519661 KIAA0319LQ8IZA0 1049 aa12.95□□□□□ -0.34
SPIDR-212ENST00000519661 PHOSPHO2Q8TCD6 241 aa12.95□□□□□ -0.34
SPIDR-212ENST00000519661 SCLYQ96I15 445 aa12.95□□□□□ -0.34
SPIDR-212ENST00000519661 POLR3CQ9BUI4 534 aaPredicted RBP12.95□□□□□ -0.34
SPIDR-212ENST00000519661 ZSWIM4Q9H7M6 989 aa12.95□□□□□ -0.34
SPIDR-212ENST00000519661 WRAP73Q9P2S5 460 aaPredicted RBP12.95□□□□□ -0.34
SPIDR-212ENST00000519661 COL4A6Q14031 1691 aa12.95□□□□□ -0.34
SPIDR-212ENST00000519661 WDR81Q562E7 1941 aa12.94□□□□□ -0.34
SPIDR-212ENST00000519661 ABHD14A-ACY1A0A1B0GW23 586 aa12.94□□□□□ -0.34
SPIDR-212ENST00000519661 SLC26A4O43511 780 aa12.94□□□□□ -0.34
SPIDR-212ENST00000519661 MAFO75444 373 aaPredicted RBP12.94□□□□□ -0.34
SPIDR-212ENST00000519661 BMP15O95972 392 aa12.94□□□□□ -0.34
SPIDR-212ENST00000519661 FGBP02675 491 aa12.94□□□□□ -0.34
SPIDR-212ENST00000519661 SPATA31C1P0DKV0 1188 aa12.94□□□□□ -0.34
SPIDR-212ENST00000519661 KLRC1P26715 233 aa12.94□□□□□ -0.34
SPIDR-212ENST00000519661 MCM7P33993 719 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms