RNA–Protein interactions for RNA: ENST00000519587.1

SDC2-203, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-203ENST00000519587 POTEBQ6S5H4 581 aa15.81■□□□□ 0.12
SDC2-203ENST00000519587 POTEGQ6S5H5 508 aa15.81■□□□□ 0.12
SDC2-203ENST00000519587 CATSPER3Q86XQ3 398 aa15.81■□□□□ 0.12
SDC2-203ENST00000519587 TRIM50Q86XT4 487 aa15.81■□□□□ 0.12
SDC2-203ENST00000519587 C4orf19Q8IY42 314 aa15.81■□□□□ 0.12
SDC2-203ENST00000519587 KLHDC9Q8NEP7 349 aa15.81■□□□□ 0.12
SDC2-203ENST00000519587 NACC1Q96RE7 527 aa15.81■□□□□ 0.12
SDC2-203ENST00000519587 MTG1Q9BT17 334 aaPredicted RBP15.81■□□□□ 0.12
SDC2-203ENST00000519587 CUEDC2Q9H467 287 aa15.81■□□□□ 0.12
SDC2-203ENST00000519587 DDX19AQ9NUU7 478 aaKnown RBP15.81■□□□□ 0.12
SDC2-203ENST00000519587 MAFBQ9Y5Q3 323 aaPredicted RBP15.81■□□□□ 0.12
SDC2-203ENST00000519587 KAT6AQ92794 2004 aa15.8■□□□□ 0.12
SDC2-203ENST00000519587 SCN10AQ9Y5Y9 1956 aa15.8■□□□□ 0.12
SDC2-203ENST00000519587 FAM237AA0A1B0GTK4 181 aa15.8■□□□□ 0.12
SDC2-203ENST00000519587 MYADML2A6NDP7 307 aa15.8■□□□□ 0.12
SDC2-203ENST00000519587 H3BRB1 525 aa15.8■□□□□ 0.12
SDC2-203ENST00000519587 DNM1LO00429 736 aa15.8■□□□□ 0.12
SDC2-203ENST00000519587 CTAGE5O15320 804 aa15.8■□□□□ 0.12
SDC2-203ENST00000519587 SLITRK3O94933 977 aa15.8■□□□□ 0.12
SDC2-203ENST00000519587 MBD3O95983 291 aa15.8■□□□□ 0.12
SDC2-203ENST00000519587 OATP04181 439 aa15.8■□□□□ 0.12
SDC2-203ENST00000519587 SPATA31C1P0DKV0 1188 aa15.8■□□□□ 0.12
SDC2-203ENST00000519587 PLCG1P19174 1290 aa15.8■□□□□ 0.12
SDC2-203ENST00000519587 EN2P19622 333 aaPredicted RBP15.8■□□□□ 0.12
SDC2-203ENST00000519587 SYKP43405 635 aa15.8■□□□□ 0.12
SDC2-203ENST00000519587 PURAQ00577 322 aaKnown RBP15.8■□□□□ 0.12
SDC2-203ENST00000519587 FAM160A1Q05DH4 1040 aa15.8■□□□□ 0.12
SDC2-203ENST00000519587 UGCGQ16739 394 aa15.8■□□□□ 0.12
SDC2-203ENST00000519587 XKR3Q5GH77 459 aa15.8■□□□□ 0.12
SDC2-203ENST00000519587 USP49Q70CQ1 688 aa15.8■□□□□ 0.12
SDC2-203ENST00000519587 OTUD6AQ7L8S5 288 aa15.8■□□□□ 0.12
SDC2-203ENST00000519587 IQUBQ8NA54 791 aa15.8■□□□□ 0.12
SDC2-203ENST00000519587 ATP8B4Q8TF62 1192 aa15.8■□□□□ 0.12
SDC2-203ENST00000519587 TUT1Q9H6E5 874 aaKnown RBP15.8■□□□□ 0.12
SDC2-203ENST00000519587 MAGEF1Q9HAY2 307 aa15.8■□□□□ 0.12
SDC2-203ENST00000519587 NRBP2Q9NSY0 501 aa15.8■□□□□ 0.12
SDC2-203ENST00000519587 LMBRD1Q9NUN5 540 aa15.8■□□□□ 0.12
SDC2-203ENST00000519587 OGDHLQ9ULD0 1010 aa15.8■□□□□ 0.12
SDC2-203ENST00000519587 KIAA1024Q9UPX6 916 aa15.8■□□□□ 0.12
SDC2-203ENST00000519587 DNM3Q9UQ16 869 aa15.8■□□□□ 0.12
SDC2-203ENST00000519587 TRPC6Q9Y210 931 aa15.8■□□□□ 0.12
SDC2-203ENST00000519587 TELO2Q9Y4R8 837 aa15.8■□□□□ 0.12
SDC2-203ENST00000519587 A0A1B0GVL5 298 aa15.79■□□□□ 0.12
SDC2-203ENST00000519587 XRCC6P12956 609 aaKnown RBP eCLIP15.79■□□□□ 0.12
SDC2-203ENST00000519587 MARK3P27448 753 aa15.79■□□□□ 0.12
SDC2-203ENST00000519587 GRB10Q13322 594 aa15.79■□□□□ 0.12
SDC2-203ENST00000519587 KCNA10Q16322 511 aa15.79■□□□□ 0.12
SDC2-203ENST00000519587 CEP57L1Q8IYX8 460 aa15.79■□□□□ 0.12
SDC2-203ENST00000519587 PDILTQ8N807 584 aa15.79■□□□□ 0.12
SDC2-203ENST00000519587 U2AF1L4Q8WU68 220 aaKnown RBP15.79■□□□□ 0.12
SDC2-203ENST00000519587 BBXQ8WY36 941 aaPredicted RBP15.79■□□□□ 0.12
SDC2-203ENST00000519587 PCYT2Q99447 389 aa15.79■□□□□ 0.12
SDC2-203ENST00000519587 C16orf70Q9BSU1 422 aa15.79■□□□□ 0.12
SDC2-203ENST00000519587 ANKEF1Q9NU02 776 aa15.79■□□□□ 0.12
SDC2-203ENST00000519587 SEPT9Q9UHD8 586 aaPredicted RBP15.79■□□□□ 0.12
SDC2-203ENST00000519587 HPSEQ9Y251 543 aa15.79■□□□□ 0.12
SDC2-203ENST00000519587 PPME1Q9Y570 386 aa15.79■□□□□ 0.12
SDC2-203ENST00000519587 COL1A2P08123 1366 aa15.78■□□□□ 0.12
SDC2-203ENST00000519587 POLR2DO15514 142 aaKnown RBP15.78■□□□□ 0.12
SDC2-203ENST00000519587 HBP1O60381 514 aa15.78■□□□□ 0.12
SDC2-203ENST00000519587 KINO60870 393 aaKnown RBP15.78■□□□□ 0.12
SDC2-203ENST00000519587 GADD45BO75293 160 aaPredicted RBP15.78■□□□□ 0.12
SDC2-203ENST00000519587 SGPL1O95470 568 aa15.78■□□□□ 0.12
SDC2-203ENST00000519587 TFRCP02786 760 aaKnown RBP15.78■□□□□ 0.12
SDC2-203ENST00000519587 ASGR1P07306 291 aa15.78■□□□□ 0.12
SDC2-203ENST00000519587 YWHABP31946 246 aaKnown RBP15.78■□□□□ 0.12
SDC2-203ENST00000519587 GJA8P48165 433 aa15.78■□□□□ 0.12
SDC2-203ENST00000519587 PSEN2P49810 448 aa15.78■□□□□ 0.12
SDC2-203ENST00000519587 NDUFA8P51970 172 aa15.78■□□□□ 0.12
SDC2-203ENST00000519587 ACLYP53396 1101 aa15.78■□□□□ 0.12
SDC2-203ENST00000519587 MFSD10Q14728 455 aa15.78■□□□□ 0.12
SDC2-203ENST00000519587 ANKLE1Q8NAG6 615 aa15.78■□□□□ 0.12
SDC2-203ENST00000519587 DHX58Q96C10 678 aa15.78■□□□□ 0.12
SDC2-203ENST00000519587 GLT1D1Q96MS3 346 aa15.78■□□□□ 0.12
SDC2-203ENST00000519587 PNMA5Q96PV4 448 aa15.78■□□□□ 0.12
SDC2-203ENST00000519587 CRISPLD2Q9H0B8 497 aa15.78■□□□□ 0.12
SDC2-203ENST00000519587 GOLPH3LQ9H4A5 285 aa15.78■□□□□ 0.12
SDC2-203ENST00000519587 DBR1Q9UK59 544 aaKnown RBP15.78■□□□□ 0.12
SDC2-203ENST00000519587 PHF24Q9UPV7 400 aa15.78■□□□□ 0.12
SDC2-203ENST00000519587 KIAA0100Q14667 2235 aaKnown RBP15.78■□□□□ 0.12
SDC2-203ENST00000519587 TRIOBPQ9H2D6 2365 aa15.77■□□□□ 0.12
SDC2-203ENST00000519587 ARHGEF35A5YM69 484 aa15.77■□□□□ 0.12
SDC2-203ENST00000519587 ZNF862O60290 1169 aa15.77■□□□□ 0.12
SDC2-203ENST00000519587 EYA4O95677 639 aa15.77■□□□□ 0.12
SDC2-203ENST00000519587 KIAA0753Q2KHM9 967 aa15.77■□□□□ 0.12
SDC2-203ENST00000519587 CCSAPQ6IQ19 270 aaPredicted RBP15.77■□□□□ 0.12
SDC2-203ENST00000519587 CXCL17Q6UXB2 119 aa15.77■□□□□ 0.12
SDC2-203ENST00000519587 EXOC8Q8IYI6 725 aa15.77■□□□□ 0.12
SDC2-203ENST00000519587 LARP4BQ92615 738 aaKnown RBP15.77■□□□□ 0.12
SDC2-203ENST00000519587 PLIN2Q99541 437 aa15.77■□□□□ 0.12
SDC2-203ENST00000519587 SEZ6LQ9BYH1 1024 aa15.77■□□□□ 0.12
SDC2-203ENST00000519587 LRRC27Q9C0I9 530 aa15.77■□□□□ 0.12
SDC2-203ENST00000519587 HOOK1Q9UJC3 728 aaKnown RBP15.77■□□□□ 0.12
SDC2-203ENST00000519587 CENPFP49454 3210 aa15.77■□□□□ 0.11
SDC2-203ENST00000519587 SSBP05455 408 aaKnown RBP eCLIP15.76■□□□□ 0.11
SDC2-203ENST00000519587 CHMP4BP1P59074 171 aa15.76■□□□□ 0.11
SDC2-203ENST00000519587 IRX5P78411 483 aaPredicted RBP15.76■□□□□ 0.11
SDC2-203ENST00000519587 PPFIA1Q13136 1202 aa15.76■□□□□ 0.11
SDC2-203ENST00000519587 PLCB4Q15147 1175 aa15.76■□□□□ 0.11
SDC2-203ENST00000519587 XKR9Q5GH70 373 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms