RNA–Protein interactions for RNA: ENST00000519054.5

SKP1-205, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 654 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-205ENST00000519054 NINJ1Q92982 152 aa5.45□□□□□ -1.54
SKP1-205ENST00000519054 RELTQ969Z4 430 aa5.45□□□□□ -1.54
SKP1-205ENST00000519054 TEPSINQ96N21 525 aa5.45□□□□□ -1.54
SKP1-205ENST00000519054 FEZ1Q99689 392 aa5.45□□□□□ -1.54
SKP1-205ENST00000519054 INTS7Q9NVH2 962 aaKnown RBP5.45□□□□□ -1.54
SKP1-205ENST00000519054 TBX22Q9Y458 520 aa5.45□□□□□ -1.54
SKP1-205ENST00000519054 C9orf118A6NHY6 69 aa5.44□□□□□ -1.54
SKP1-205ENST00000519054 H0Y858 1186 aa5.44□□□□□ -1.54
SKP1-205ENST00000519054 CBX4O00257 560 aa5.44□□□□□ -1.54
SKP1-205ENST00000519054 KPNA6O60684 536 aa5.44□□□□□ -1.54
SKP1-205ENST00000519054 KLHL18O94889 574 aa5.44□□□□□ -1.54
SKP1-205ENST00000519054 CHGBP05060 677 aa5.44□□□□□ -1.54
SKP1-205ENST00000519054 NEK4P51957 841 aa5.44□□□□□ -1.54
SKP1-205ENST00000519054 CATSPEREQ5SY80 951 aa5.44□□□□□ -1.54
SKP1-205ENST00000519054 GIMAP6Q6P9H5 292 aa5.44□□□□□ -1.54
SKP1-205ENST00000519054 BORAQ6PGQ7 559 aa5.44□□□□□ -1.54
SKP1-205ENST00000519054 LRSAM1Q6UWE0 723 aa5.44□□□□□ -1.54
SKP1-205ENST00000519054 LRRTM3Q86VH5 581 aa5.44□□□□□ -1.54
SKP1-205ENST00000519054 ERCC4Q92889 916 aaPredicted RBP5.44□□□□□ -1.54
SKP1-205ENST00000519054 MBD6Q96DN6 1003 aa5.44□□□□□ -1.54
SKP1-205ENST00000519054 GBP4Q96PP9 640 aa5.44□□□□□ -1.54
SKP1-205ENST00000519054 BARX1Q9HBU1 254 aaPredicted RBP5.44□□□□□ -1.54
SKP1-205ENST00000519054 ZDHHC9Q9Y397 364 aa5.44□□□□□ -1.54
SKP1-205ENST00000519054 PRAMEF22A3QJZ6 481 aa5.43□□□□□ -1.54
SKP1-205ENST00000519054 ENPP3O14638 875 aa5.43□□□□□ -1.54
SKP1-205ENST00000519054 DVL2O14641 736 aa5.43□□□□□ -1.54
SKP1-205ENST00000519054 MPIG6BO95866 241 aa5.43□□□□□ -1.54
SKP1-205ENST00000519054 SDHAP31040 664 aa5.43□□□□□ -1.54
SKP1-205ENST00000519054 KIF11P52732 1056 aa5.43□□□□□ -1.54
SKP1-205ENST00000519054 NFATC3Q12968 1075 aa5.43□□□□□ -1.54
SKP1-205ENST00000519054 WDR72Q3MJ13 1102 aa5.43□□□□□ -1.54
SKP1-205ENST00000519054 DALRD3Q5D0E6 543 aaKnown RBP5.43□□□□□ -1.54
SKP1-205ENST00000519054 ZFYVE27Q5T4F4 411 aa5.43□□□□□ -1.54
SKP1-205ENST00000519054 DPP8Q6V1X1 898 aaPredicted RBP5.43□□□□□ -1.54
SKP1-205ENST00000519054 KIAA0907Q7Z7F0 614 aaPredicted RBP5.43□□□□□ -1.54
SKP1-205ENST00000519054 KLHL36Q8N4N3 616 aa5.43□□□□□ -1.54
SKP1-205ENST00000519054 AMNQ9BXJ7 453 aa5.43□□□□□ -1.54
SKP1-205ENST00000519054 GALNT8Q9NY28 637 aa5.43□□□□□ -1.54
SKP1-205ENST00000519054 B4GALT6Q9UBX8 382 aa5.43□□□□□ -1.54
SKP1-205ENST00000519054 INVSQ9Y283 1065 aa5.43□□□□□ -1.54
SKP1-205ENST00000519054 TLDC2A0PJX2 215 aa5.42□□□□□ -1.54
SKP1-205ENST00000519054 FAM83GA6ND36 823 aa5.42□□□□□ -1.54
SKP1-205ENST00000519054 H7C1D1 291 aa5.42□□□□□ -1.54
SKP1-205ENST00000519054 B4GALT3O60512 393 aa5.42□□□□□ -1.54
SKP1-205ENST00000519054 FOXD2O60548 495 aaPredicted RBP5.42□□□□□ -1.54
SKP1-205ENST00000519054 ADCY8P40145 1251 aa5.42□□□□□ -1.54
SKP1-205ENST00000519054 ECE1P42892 770 aa5.42□□□□□ -1.54
SKP1-205ENST00000519054 IL13RA1P78552 427 aa5.42□□□□□ -1.54
SKP1-205ENST00000519054 SKOR2Q2VWA4 1001 aaPredicted RBP5.42□□□□□ -1.54
SKP1-205ENST00000519054 CC2D1AQ6P1N0 951 aaPredicted RBP5.42□□□□□ -1.54
SKP1-205ENST00000519054 Q6ZUG5 572 aa5.42□□□□□ -1.54
SKP1-205ENST00000519054 GPR155Q7Z3F1 870 aa5.42□□□□□ -1.54
SKP1-205ENST00000519054 KBTBD2Q8IY47 623 aa5.42□□□□□ -1.54
SKP1-205ENST00000519054 LGI4Q8N135 537 aa5.42□□□□□ -1.54
SKP1-205ENST00000519054 CXorf38Q8TB03 319 aa5.42□□□□□ -1.54
SKP1-205ENST00000519054 BDH2Q9BUT1 245 aa5.42□□□□□ -1.54
SKP1-205ENST00000519054 TARS2Q9BW92 718 aaKnown RBP5.42□□□□□ -1.54
SKP1-205ENST00000519054 PCIF1Q9H4Z3 704 aa5.42□□□□□ -1.54
SKP1-205ENST00000519054 PLAAQ9Y263 795 aa5.42□□□□□ -1.54
SKP1-205ENST00000519054 TMA7Q9Y2S6 64 aaKnown RBP5.42□□□□□ -1.54
SKP1-205ENST00000519054 ASB1Q9Y576 335 aa5.42□□□□□ -1.54
SKP1-205ENST00000519054 KRTAP9-7A8MTY7 169 aa5.41□□□□□ -1.54
SKP1-205ENST00000519054 GOLGA6L22H0YM25 854 aa5.41□□□□□ -1.54
SKP1-205ENST00000519054 KIAA1958Q8N8K9 716 aa5.41□□□□□ -1.54
SKP1-205ENST00000519054 WDR48Q8TAF3 677 aa5.41□□□□□ -1.54
SKP1-205ENST00000519054 MFSD3Q96ES6 412 aa5.41□□□□□ -1.54
SKP1-205ENST00000519054 BTBD2Q9BX70 525 aa5.41□□□□□ -1.54
SKP1-205ENST00000519054 ADAM29Q9UKF5 820 aa5.41□□□□□ -1.54
SKP1-205ENST00000519054 ZKSCAN5Q9Y2L8 839 aa5.41□□□□□ -1.54
SKP1-205ENST00000519054 ZNF891A8MT65 544 aaPredicted RBP5.4□□□□□ -1.54
SKP1-205ENST00000519054 B4GALT4O60513 344 aa5.4□□□□□ -1.54
SKP1-205ENST00000519054 IGSF3O75054 1194 aa5.4□□□□□ -1.54
SKP1-205ENST00000519054 SYN1P17600 705 aa5.4□□□□□ -1.54
SKP1-205ENST00000519054 SLC9A1P19634 815 aa5.4□□□□□ -1.54
SKP1-205ENST00000519054 POU3F2P20265 443 aaPredicted RBP5.4□□□□□ -1.54
SKP1-205ENST00000519054 PTX3P26022 381 aaPredicted RBP5.4□□□□□ -1.54
SKP1-205ENST00000519054 POLD1P28340 1107 aa5.4□□□□□ -1.54
SKP1-205ENST00000519054 CSF2RBP32927 897 aa5.4□□□□□ -1.54
SKP1-205ENST00000519054 CD83Q01151 205 aa5.4□□□□□ -1.54
SKP1-205ENST00000519054 PCBP1Q15365 356 aaKnown RBP eCLIP5.4□□□□□ -1.54
SKP1-205ENST00000519054 ZNF174Q15697 407 aa5.4□□□□□ -1.54
SKP1-205ENST00000519054 RALYLQ86SE5 291 aaKnown RBP5.4□□□□□ -1.54
SKP1-205ENST00000519054 NXPE1Q8N323 547 aa5.4□□□□□ -1.54
SKP1-205ENST00000519054 AJUBAQ96IF1 538 aa5.4□□□□□ -1.54
SKP1-205ENST00000519054 MTFR1LQ9H019 292 aa5.4□□□□□ -1.54
SKP1-205ENST00000519054 OR10A5Q9H207 317 aa5.4□□□□□ -1.54
SKP1-205ENST00000519054 ACSS2Q9NR19 701 aa5.4□□□□□ -1.54
SKP1-205ENST00000519054 OXSMQ9NWU1 459 aa5.4□□□□□ -1.54
SKP1-205ENST00000519054 H2AFY2Q9P0M6 372 aaPredicted RBP5.4□□□□□ -1.54
SKP1-205ENST00000519054 PTPN22Q9Y2R2 807 aa5.4□□□□□ -1.54
SKP1-205ENST00000519054 ZNF536O15090 1300 aa5.4□□□□□ -1.55
SKP1-205ENST00000519054 GAS7O60861 476 aa5.39□□□□□ -1.55
SKP1-205ENST00000519054 ZNF888P0CJ79 500 aaPredicted RBP5.39□□□□□ -1.55
SKP1-205ENST00000519054 ATP2A2P16615 1042 aaKnown RBP5.39□□□□□ -1.55
SKP1-205ENST00000519054 KCNQ1P51787 676 aa5.39□□□□□ -1.55
SKP1-205ENST00000519054 GYS2P54840 703 aa5.39□□□□□ -1.55
SKP1-205ENST00000519054 PLP2Q04941 152 aa5.39□□□□□ -1.55
SKP1-205ENST00000519054 TOP3AQ13472 1001 aaPredicted RBP5.39□□□□□ -1.55
SKP1-205ENST00000519054 STILQ15468 1287 aa5.39□□□□□ -1.55
SKP1-205ENST00000519054 SEPT7Q16181 437 aaKnown RBP5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms