RNA–Protein interactions for RNA: ENST00000518528.1

PVT1-207, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 624 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-207ENST00000518528 RTN4RL1Q86UN2 441 aaPredicted RBP10.26□□□□□ -0.77
PVT1-207ENST00000518528 HOMER1Q86YM7 354 aa10.26□□□□□ -0.77
PVT1-207ENST00000518528 CRIPAKQ8N1N5 446 aa10.26□□□□□ -0.77
PVT1-207ENST00000518528 PLCD3Q8N3E9 789 aa10.26□□□□□ -0.77
PVT1-207ENST00000518528 NME8Q8N427 588 aa10.26□□□□□ -0.77
PVT1-207ENST00000518528 TDRD5Q8NAT2 981 aaKnown RBP10.26□□□□□ -0.77
PVT1-207ENST00000518528 TMEM87AQ8NBN3 555 aa10.26□□□□□ -0.77
PVT1-207ENST00000518528 FLCNQ8NFG4 579 aa10.26□□□□□ -0.77
PVT1-207ENST00000518528 VN1R2Q8NFZ6 395 aa10.26□□□□□ -0.77
PVT1-207ENST00000518528 LINC01599Q8WXQ3 324 aa10.26□□□□□ -0.77
PVT1-207ENST00000518528 MTMR8Q96EF0 704 aa10.26□□□□□ -0.77
PVT1-207ENST00000518528 APOL5Q9BWW9 433 aa10.26□□□□□ -0.77
PVT1-207ENST00000518528 KRT23Q9C075 422 aa10.26□□□□□ -0.77
PVT1-207ENST00000518528 BCAS3Q9H6U6 928 aa10.26□□□□□ -0.77
PVT1-207ENST00000518528 CNNM2Q9H8M5 875 aa10.26□□□□□ -0.77
PVT1-207ENST00000518528 C1orf112Q9NSG2 853 aa10.26□□□□□ -0.77
PVT1-207ENST00000518528 RCAN3Q9UKA8 241 aa10.26□□□□□ -0.77
PVT1-207ENST00000518528 USP34Q70CQ2 3546 aa10.26□□□□□ -0.77
PVT1-207ENST00000518528 B4E1Z4 1266 aa10.25□□□□□ -0.77
PVT1-207ENST00000518528 FSCN2O14926 492 aa10.25□□□□□ -0.77
PVT1-207ENST00000518528 PPP1R11O60927 126 aaPredicted RBP10.25□□□□□ -0.77
PVT1-207ENST00000518528 LMNAP02545 664 aaKnown RBP10.25□□□□□ -0.77
PVT1-207ENST00000518528 PPM1AP35813 382 aa10.25□□□□□ -0.77
PVT1-207ENST00000518528 ERVFC1P60507 584 aa10.25□□□□□ -0.77
PVT1-207ENST00000518528 MRPS9P82933 396 aaKnown RBP10.25□□□□□ -0.77
PVT1-207ENST00000518528 RBM10P98175 930 aaKnown RBP10.25□□□□□ -0.77
PVT1-207ENST00000518528 NFX1Q12986 1120 aaKnown RBP10.25□□□□□ -0.77
PVT1-207ENST00000518528 NMIQ13287 307 aaPredicted RBP10.25□□□□□ -0.77
PVT1-207ENST00000518528 PUM1Q14671 1186 aaKnown RBP eCLIP10.25□□□□□ -0.77
PVT1-207ENST00000518528 STAG2Q8N3U4 1231 aa10.25□□□□□ -0.77
PVT1-207ENST00000518528 COLGALT1Q8NBJ5 622 aa10.25□□□□□ -0.77
PVT1-207ENST00000518528 SMARCC2Q8TAQ2 1214 aa10.25□□□□□ -0.77
PVT1-207ENST00000518528 MRPS27Q92552 414 aaKnown RBP10.25□□□□□ -0.77
PVT1-207ENST00000518528 TCF25Q9BQ70 676 aa10.25□□□□□ -0.77
PVT1-207ENST00000518528 RTP3Q9BQQ7 232 aa10.25□□□□□ -0.77
PVT1-207ENST00000518528 CELF4Q9BZC1 486 aaKnown RBP10.25□□□□□ -0.77
PVT1-207ENST00000518528 ADAM7Q9H2U9 754 aa10.25□□□□□ -0.77
PVT1-207ENST00000518528 AZI2Q9H6S1 392 aa10.25□□□□□ -0.77
PVT1-207ENST00000518528 TPRP12270 2363 aaKnown RBP10.25□□□□□ -0.77
PVT1-207ENST00000518528 IGSF9BQ9UPX0 1349 aa10.25□□□□□ -0.77
PVT1-207ENST00000518528 NCOR2Q9Y618 2525 aa10.25□□□□□ -0.77
PVT1-207ENST00000518528 PNMA6FA0A0J9YX94 578 aa10.24□□□□□ -0.77
PVT1-207ENST00000518528 C2CD4DB7Z1M9 353 aa10.24□□□□□ -0.77
PVT1-207ENST00000518528 HOXA2O43364 376 aa10.24□□□□□ -0.77
PVT1-207ENST00000518528 GATMP50440 423 aa10.24□□□□□ -0.77
PVT1-207ENST00000518528 KRT76Q01546 638 aa10.24□□□□□ -0.77
PVT1-207ENST00000518528 PLCB3Q01970 1234 aa10.24□□□□□ -0.77
PVT1-207ENST00000518528 SEMA3FQ13275 785 aa10.24□□□□□ -0.77
PVT1-207ENST00000518528 IMMTQ16891 758 aaKnown RBP10.24□□□□□ -0.77
PVT1-207ENST00000518528 ATAT1Q5SQI0 421 aa10.24□□□□□ -0.77
PVT1-207ENST00000518528 PCNX4Q63HM2 1172 aa10.24□□□□□ -0.77
PVT1-207ENST00000518528 SLC24A5Q71RS6 500 aa10.24□□□□□ -0.77
PVT1-207ENST00000518528 TMC7Q7Z402 723 aa10.24□□□□□ -0.77
PVT1-207ENST00000518528 ZNF589Q86UQ0 364 aaPredicted RBP10.24□□□□□ -0.77
PVT1-207ENST00000518528 ZDHHC14Q8IZN3 488 aa10.24□□□□□ -0.77
PVT1-207ENST00000518528 GPRASP2Q96D09 838 aa10.24□□□□□ -0.77
PVT1-207ENST00000518528 HINFPQ9BQA5 517 aa10.24□□□□□ -0.77
PVT1-207ENST00000518528 ATP6V0A4Q9HBG4 840 aa10.24□□□□□ -0.77
PVT1-207ENST00000518528 TYW1Q9NV66 732 aaKnown RBP10.24□□□□□ -0.77
PVT1-207ENST00000518528 ZSWIM5Q9P217 1185 aa10.24□□□□□ -0.77
PVT1-207ENST00000518528 LIMD1Q9UGP4 676 aa10.24□□□□□ -0.77
PVT1-207ENST00000518528 FBXL21Q9UKT6 434 aa10.24□□□□□ -0.77
PVT1-207ENST00000518528 PCDHA2Q9Y5H9 948 aa10.24□□□□□ -0.77
PVT1-207ENST00000518528 EPG5Q9HCE0 2579 aa10.24□□□□□ -0.77
PVT1-207ENST00000518528 FRMPD4Q14CM0 1322 aa10.24□□□□□ -0.77
PVT1-207ENST00000518528 TTC3P53804 2025 aa10.24□□□□□ -0.77
PVT1-207ENST00000518528 GPR182O15218 404 aa10.23□□□□□ -0.77
PVT1-207ENST00000518528 RPS6KA5O75582 802 aa10.23□□□□□ -0.77
PVT1-207ENST00000518528 INSRRP14616 1297 aa10.23□□□□□ -0.77
PVT1-207ENST00000518528 RFX1P22670 979 aa10.23□□□□□ -0.77
PVT1-207ENST00000518528 TMEM62Q0P6H9 643 aa10.23□□□□□ -0.77
PVT1-207ENST00000518528 APOBRQ0VD83 1088 aa10.23□□□□□ -0.77
PVT1-207ENST00000518528 KCNC3Q14003 757 aa10.23□□□□□ -0.77
PVT1-207ENST00000518528 SMC1AQ14683 1233 aaKnown RBP10.23□□□□□ -0.77
PVT1-207ENST00000518528 ANGPT1Q15389 498 aa10.23□□□□□ -0.77
PVT1-207ENST00000518528 MARCH8Q5T0T0 291 aa10.23□□□□□ -0.77
PVT1-207ENST00000518528 CCDC105Q8IYK2 499 aa10.23□□□□□ -0.77
PVT1-207ENST00000518528 ABI1Q8IZP0 508 aa10.23□□□□□ -0.77
PVT1-207ENST00000518528 DTWD2Q8NBA8 298 aa10.23□□□□□ -0.77
PVT1-207ENST00000518528 ACSF2Q96CM8 615 aaPredicted RBP10.23□□□□□ -0.77
PVT1-207ENST00000518528 RMDN1Q96DB5 314 aa10.23□□□□□ -0.77
PVT1-207ENST00000518528 ZNF558Q96NG5 402 aa10.23□□□□□ -0.77
PVT1-207ENST00000518528 PIGSQ96S52 555 aa10.23□□□□□ -0.77
PVT1-207ENST00000518528 ADAM2Q99965 735 aa10.23□□□□□ -0.77
PVT1-207ENST00000518528 POMKQ9H5K3 350 aa10.23□□□□□ -0.77
PVT1-207ENST00000518528 DZANK1Q9NVP4 752 aa10.23□□□□□ -0.77
PVT1-207ENST00000518528 MAD2L2Q9UI95 211 aa10.23□□□□□ -0.77
PVT1-207ENST00000518528 DBR1Q9UK59 544 aaKnown RBP10.23□□□□□ -0.77
PVT1-207ENST00000518528 USTQ9Y2C2 406 aa10.23□□□□□ -0.77
PVT1-207ENST00000518528 KDM3AQ9Y4C1 1321 aa10.23□□□□□ -0.77
PVT1-207ENST00000518528 CACNA1GO43497 2377 aa10.22□□□□□ -0.77
PVT1-207ENST00000518528 NLRC5Q86WI3 1866 aa10.22□□□□□ -0.77
PVT1-207ENST00000518528 SMIM35A0A1B0GVV1 85 aa10.22□□□□□ -0.77
PVT1-207ENST00000518528 MED19A0JLT2 244 aaPredicted RBP10.22□□□□□ -0.77
PVT1-207ENST00000518528 PALM3A6NDB9 673 aaPredicted RBP10.22□□□□□ -0.77
PVT1-207ENST00000518528 STK25O00506 426 aa10.22□□□□□ -0.77
PVT1-207ENST00000518528 MAFGO15525 162 aa10.22□□□□□ -0.77
PVT1-207ENST00000518528 ASGR2P07307 311 aa10.22□□□□□ -0.77
PVT1-207ENST00000518528 AOC1P19801 751 aa10.22□□□□□ -0.77
PVT1-207ENST00000518528 CA8P35219 290 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms