RNA–Protein interactions for RNA: ENST00000517992.1

SNTB1-202, Transcript of syntrophin beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNTB1, Length 2,273 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNTB1-202ENST00000517992 SH3GL2Q99962 352 aa27.41■■□□□ 1.98
SNTB1-202ENST00000517992 ARMCX3Q9UH62 379 aaPredicted RBP27.41■■□□□ 1.98
SNTB1-202ENST00000517992 A0A087X0T9 212 aa27.4■■□□□ 1.98
SNTB1-202ENST00000517992 CES2O00748 559 aa27.4■■□□□ 1.98
SNTB1-202ENST00000517992 CALUO43852 315 aaPredicted RBP27.4■■□□□ 1.98
SNTB1-202ENST00000517992 FAM228BP0C875 321 aa27.4■■□□□ 1.98
SNTB1-202ENST00000517992 KLRC1P26715 233 aa27.4■■□□□ 1.98
SNTB1-202ENST00000517992 ICA1Q05084 483 aa27.4■■□□□ 1.98
SNTB1-202ENST00000517992 ALS2CLQ60I27 953 aa27.4■■□□□ 1.98
SNTB1-202ENST00000517992 SIAH1Q8IUQ4 282 aa27.4■■□□□ 1.98
SNTB1-202ENST00000517992 P2RX7Q99572 595 aaKnown RBP27.4■■□□□ 1.98
SNTB1-202ENST00000517992 AFPP02771 609 aaKnown RBP27.39■■□□□ 1.98
SNTB1-202ENST00000517992 FBXO11Q86XK2 927 aa27.39■■□□□ 1.98
SNTB1-202ENST00000517992 FAM133AQ8N9E0 248 aa27.39■■□□□ 1.98
SNTB1-202ENST00000517992 REEP2Q9BRK0 252 aa27.39■■□□□ 1.98
SNTB1-202ENST00000517992 EHD2Q9NZN4 543 aa27.39■■□□□ 1.98
SNTB1-202ENST00000517992 SLC16A3O15427 465 aaKnown RBP27.39■■□□□ 1.98
SNTB1-202ENST00000517992 SHOX2O60902 331 aaPredicted RBP27.39■■□□□ 1.98
SNTB1-202ENST00000517992 MATR3P43243 847 aaKnown RBP eCLIP27.39■■□□□ 1.984e-7■■■■□ 21.1
SNTB1-202ENST00000517992 CASP5P51878 434 aa27.39■■□□□ 1.98
SNTB1-202ENST00000517992 FAM76AQ8TAV0 307 aa27.39■■□□□ 1.98
SNTB1-202ENST00000517992 CNKSR2Q8WXI2 1034 aa27.39■■□□□ 1.98
SNTB1-202ENST00000517992 ZBTB9Q96C00 473 aa27.39■■□□□ 1.98
SNTB1-202ENST00000517992 SMARCAL1Q9NZC9 954 aa27.39■■□□□ 1.98
SNTB1-202ENST00000517992 FAM198AQ9UFP1 575 aa27.39■■□□□ 1.98
SNTB1-202ENST00000517992 FBXL5Q9UKA1 691 aa27.39■■□□□ 1.98
SNTB1-202ENST00000517992 DDTLA6NHG4 134 aaPredicted RBP27.38■■□□□ 1.97
SNTB1-202ENST00000517992 SPDYE3A6NKU9 549 aa27.38■■□□□ 1.97
SNTB1-202ENST00000517992 GOLGA8KD6RF30 607 aa27.38■■□□□ 1.97
SNTB1-202ENST00000517992 KIAA0753Q2KHM9 967 aa27.38■■□□□ 1.97
SNTB1-202ENST00000517992 LRRC31Q6UY01 552 aa27.38■■□□□ 1.97
SNTB1-202ENST00000517992 SFR1Q86XK3 245 aa27.38■■□□□ 1.97
SNTB1-202ENST00000517992 RIN2Q8WYP3 895 aaPredicted RBP27.38■■□□□ 1.97
SNTB1-202ENST00000517992 TRIM34Q9BYJ4 488 aa27.38■■□□□ 1.97
SNTB1-202ENST00000517992 ZHX3Q9H4I2 956 aa27.38■■□□□ 1.97
SNTB1-202ENST00000517992 METTL14Q9HCE5 456 aaKnown RBP27.38■■□□□ 1.97
SNTB1-202ENST00000517992 GDF3Q9NR23 364 aa27.38■■□□□ 1.97
SNTB1-202ENST00000517992 OPA1O60313 960 aa27.38■■□□□ 1.97
SNTB1-202ENST00000517992 EPB41P11171 864 aaKnown RBP27.38■■□□□ 1.97
SNTB1-202ENST00000517992 IFT20Q8IY31 132 aa27.38■■□□□ 1.97
SNTB1-202ENST00000517992 INPP4AQ96PE3 977 aaPredicted RBP27.38■■□□□ 1.97
SNTB1-202ENST00000517992 POLR3CQ9BUI4 534 aaPredicted RBP27.38■■□□□ 1.97
SNTB1-202ENST00000517992 TYW1Q9NV66 732 aaKnown RBP27.38■■□□□ 1.97
SNTB1-202ENST00000517992 F5H6K3 240 aa27.37■■□□□ 1.97
SNTB1-202ENST00000517992 RAD21O60216 631 aa27.37■■□□□ 1.97
SNTB1-202ENST00000517992 SLURP2P0DP57 97 aa27.37■■□□□ 1.97
SNTB1-202ENST00000517992 APBA1Q02410 837 aa27.37■■□□□ 1.97
SNTB1-202ENST00000517992 KLRC3Q07444 240 aa27.37■■□□□ 1.97
SNTB1-202ENST00000517992 PABPC4Q13310 644 aaKnown RBP eCLIP27.37■■□□□ 1.97
SNTB1-202ENST00000517992 SYDE2Q5VT97 1194 aa27.37■■□□□ 1.97
SNTB1-202ENST00000517992 RTKN2Q8IZC4 609 aa27.37■■□□□ 1.97
SNTB1-202ENST00000517992 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP27.37■■□□□ 1.971e-12■■■■□ 20.3
SNTB1-202ENST00000517992 VAV3Q9UKW4 847 aa27.37■■□□□ 1.97
SNTB1-202ENST00000517992 FER1L6Q2WGJ9 1857 aa27.37■■□□□ 1.97
SNTB1-202ENST00000517992 GOLGA6CA6NDK9 693 aa27.37■■□□□ 1.97
SNTB1-202ENST00000517992 CYP3A4P08684 503 aa27.37■■□□□ 1.97
SNTB1-202ENST00000517992 GOLGA6DP0CG33 693 aa27.37■■□□□ 1.97
SNTB1-202ENST00000517992 HOXD13P35453 343 aa27.37■■□□□ 1.97
SNTB1-202ENST00000517992 PRKCIP41743 596 aa27.37■■□□□ 1.97
SNTB1-202ENST00000517992 PSMC6P62333 389 aa27.37■■□□□ 1.97
SNTB1-202ENST00000517992 IRX5P78411 483 aaPredicted RBP27.37■■□□□ 1.97
SNTB1-202ENST00000517992 SLC7A5Q01650 507 aa27.37■■□□□ 1.97
SNTB1-202ENST00000517992 BTNL9Q6UXG8 535 aa27.37■■□□□ 1.97
SNTB1-202ENST00000517992 SH3BP5LQ7L8J4 393 aa27.37■■□□□ 1.97
SNTB1-202ENST00000517992 IRF2BP2Q7Z5L9 587 aa27.37■■□□□ 1.97
SNTB1-202ENST00000517992 GOLGA6AQ9NYA3 693 aa27.37■■□□□ 1.97
SNTB1-202ENST00000517992 ADAMTS1Q9UHI8 967 aa27.37■■□□□ 1.97
SNTB1-202ENST00000517992 SYNPO2Q9UMS6 1093 aa27.37■■□□□ 1.97
SNTB1-202ENST00000517992 ZNF646O15015 1829 aaPredicted RBP27.36■■□□□ 1.97
SNTB1-202ENST00000517992 RPL13P26373 211 aaKnown RBP27.36■■□□□ 1.97
SNTB1-202ENST00000517992 AOC3Q16853 763 aa27.36■■□□□ 1.97
SNTB1-202ENST00000517992 STRIP1Q5VSL9 837 aa27.36■■□□□ 1.97
SNTB1-202ENST00000517992 SRLQ86TD4 932 aa27.36■■□□□ 1.97
SNTB1-202ENST00000517992 UIMC1Q96RL1 719 aa27.36■■□□□ 1.97
SNTB1-202ENST00000517992 FAM86B1E9PN63 330 aa27.36■■□□□ 1.97
SNTB1-202ENST00000517992 FAM86B2P0C5J1 330 aa27.36■■□□□ 1.97
SNTB1-202ENST00000517992 XRCC5P13010 732 aaKnown RBP27.36■■□□□ 1.97
SNTB1-202ENST00000517992 UCHL3P15374 230 aa27.36■■□□□ 1.97
SNTB1-202ENST00000517992 PPFIA1Q13136 1202 aa27.36■■□□□ 1.97
SNTB1-202ENST00000517992 IFI16Q16666 785 aaKnown RBP27.36■■□□□ 1.97
SNTB1-202ENST00000517992 MS4A14Q96JA4 679 aa27.36■■□□□ 1.97
SNTB1-202ENST00000517992 FAM196BA6NMK8 535 aa27.35■■□□□ 1.97
SNTB1-202ENST00000517992 NDUFB10O96000 172 aa27.35■■□□□ 1.97
SNTB1-202ENST00000517992 EXOC3L4Q17RC7 722 aa27.35■■□□□ 1.97
SNTB1-202ENST00000517992 SHROOM1Q2M3G4 852 aaPredicted RBP27.35■■□□□ 1.97
SNTB1-202ENST00000517992 GBP6Q6ZN66 633 aa27.35■■□□□ 1.97
SNTB1-202ENST00000517992 ZNF277Q9NRM2 450 aaPredicted RBP27.35■■□□□ 1.97
SNTB1-202ENST00000517992 PIK3CDO00329 1044 aa27.34■■□□□ 1.97
SNTB1-202ENST00000517992 EYA4O95677 639 aa27.34■■□□□ 1.97
SNTB1-202ENST00000517992 FTCDO95954 541 aa27.34■■□□□ 1.97
SNTB1-202ENST00000517992 GAP43P17677 238 aa27.34■■□□□ 1.97
SNTB1-202ENST00000517992 TCP10Q12799 353 aa27.34■■□□□ 1.97
SNTB1-202ENST00000517992 SPAG5Q96R06 1193 aa27.34■■□□□ 1.97
SNTB1-202ENST00000517992 DBNDD1Q9H9R9 158 aa27.34■■□□□ 1.97
SNTB1-202ENST00000517992 OLFML3Q9NRN5 406 aa27.34■■□□□ 1.97
SNTB1-202ENST00000517992 COL2A1P02458 1487 aaPredicted RBP27.34■■□□□ 1.97
SNTB1-202ENST00000517992 ATRNL1Q5VV63 1379 aa27.34■■□□□ 1.97
SNTB1-202ENST00000517992 GTPBP10A4D1E9 387 aaKnown RBP27.34■■□□□ 1.97
SNTB1-202ENST00000517992 MSH4O15457 936 aa27.34■■□□□ 1.97
SNTB1-202ENST00000517992 PPFIA4O75335 1185 aa27.34■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms