RNA–Protein interactions for RNA: ENST00000517713.5

COL13A1-210, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-210ENST00000517713 DCPSQ96C86 337 aaKnown RBP29.28■■■□□ 2.28
COL13A1-210ENST00000517713 TYW1Q9NV66 732 aaKnown RBP29.28■■■□□ 2.28
COL13A1-210ENST00000517713 HOXC10Q9NYD6 342 aa29.28■■■□□ 2.28
COL13A1-210ENST00000517713 SEL1LQ9UBV2 794 aa29.28■■■□□ 2.28
COL13A1-210ENST00000517713 ZNF215Q9UL58 517 aaPredicted RBP29.28■■■□□ 2.28
COL13A1-210ENST00000517713 UTP18Q9Y5J1 556 aaKnown RBP eCLIP29.28■■■□□ 2.28
COL13A1-210ENST00000517713 SNCAIPQ9Y6H5 919 aa29.28■■■□□ 2.28
COL13A1-210ENST00000517713 EIF3DO15371 548 aaKnown RBP eCLIP29.27■■■□□ 2.28
COL13A1-210ENST00000517713 ZNF131P52739 623 aa29.27■■■□□ 2.28
COL13A1-210ENST00000517713 MAP3K9P80192 1104 aa29.27■■■□□ 2.28
COL13A1-210ENST00000517713 RBM46Q8TBY0 533 aaKnown RBP29.27■■■□□ 2.28
COL13A1-210ENST00000517713 GUCY2CP25092 1073 aa29.27■■■□□ 2.28
COL13A1-210ENST00000517713 CCND2P30279 289 aa29.27■■■□□ 2.28
COL13A1-210ENST00000517713 VGLL4Q14135 290 aa29.27■■■□□ 2.28
COL13A1-210ENST00000517713 DLK2Q6UY11 383 aa29.27■■■□□ 2.28
COL13A1-210ENST00000517713 TEX13BQ9BXU2 312 aa29.27■■■□□ 2.28
COL13A1-210ENST00000517713 FAM184BQ9ULE4 1060 aa29.27■■■□□ 2.28
COL13A1-210ENST00000517713 TESPA1A2RU30 521 aaPredicted RBP29.26■■■□□ 2.27
COL13A1-210ENST00000517713 EPHB6O15197 1021 aa29.26■■■□□ 2.27
COL13A1-210ENST00000517713 CCDC155Q8N6L0 562 aa29.26■■■□□ 2.27
COL13A1-210ENST00000517713 MYPNQ86TC9 1320 aa29.26■■■□□ 2.27
COL13A1-210ENST00000517713 WDR90Q96KV7 1748 aa29.25■■■□□ 2.27
COL13A1-210ENST00000517713 URI1O94763 535 aaPredicted RBP29.25■■■□□ 2.27
COL13A1-210ENST00000517713 NMT1P30419 496 aaKnown RBP29.25■■■□□ 2.27
COL13A1-210ENST00000517713 KCNMA1Q12791 1236 aa29.25■■■□□ 2.27
COL13A1-210ENST00000517713 ARHGAP29Q52LW3 1261 aa29.25■■■□□ 2.27
COL13A1-210ENST00000517713 VSIG10LQ86VR7 867 aa29.25■■■□□ 2.27
COL13A1-210ENST00000517713 SULF1Q8IWU6 871 aa29.25■■■□□ 2.27
COL13A1-210ENST00000517713 ZNF710Q8N1W2 664 aa29.25■■■□□ 2.27
COL13A1-210ENST00000517713 SMCR8Q8TEV9 937 aaPredicted RBP29.25■■■□□ 2.27
COL13A1-210ENST00000517713 ERO1AQ96HE7 468 aa29.25■■■□□ 2.27
COL13A1-210ENST00000517713 IRX2Q9BZI1 471 aaPredicted RBP29.25■■■□□ 2.27
COL13A1-210ENST00000517713 ASTN1O14525 1302 aa29.25■■■□□ 2.27
COL13A1-210ENST00000517713 SPDYE16A6NNV3 312 aaPredicted RBP29.25■■■□□ 2.27
COL13A1-210ENST00000517713 KIF5CO60282 957 aa29.25■■■□□ 2.27
COL13A1-210ENST00000517713 ATP9AO75110 1047 aa29.25■■■□□ 2.27
COL13A1-210ENST00000517713 QARSP47897 775 aaKnown RBP29.25■■■□□ 2.27
COL13A1-210ENST00000517713 CDK17Q00537 523 aa29.25■■■□□ 2.27
COL13A1-210ENST00000517713 NEK11Q8NG66 645 aa29.25■■■□□ 2.27
COL13A1-210ENST00000517713 NR3C2P08235 984 aa29.24■■■□□ 2.27
COL13A1-210ENST00000517713 RPL13P26373 211 aaKnown RBP29.24■■■□□ 2.27
COL13A1-210ENST00000517713 KCNA1Q09470 495 aa29.24■■■□□ 2.27
COL13A1-210ENST00000517713 FRMD5Q7Z6J6 570 aa29.24■■■□□ 2.27
COL13A1-210ENST00000517713 ACAD9Q9H845 621 aa29.24■■■□□ 2.27
COL13A1-210ENST00000517713 NHEJ1Q9H9Q4 299 aaPredicted RBP29.24■■■□□ 2.27
COL13A1-210ENST00000517713 DBR1Q9UK59 544 aaKnown RBP29.24■■■□□ 2.27
COL13A1-210ENST00000517713 REXO2Q9Y3B8 237 aaKnown RBP29.24■■■□□ 2.27
COL13A1-210ENST00000517713 ADM5C9JUS6 153 aa29.23■■■□□ 2.27
COL13A1-210ENST00000517713 HNRNPH3P31942 346 aaKnown RBP29.23■■■□□ 2.27
COL13A1-210ENST00000517713 CYLC1P35663 651 aaPredicted RBP29.23■■■□□ 2.27
COL13A1-210ENST00000517713 PADI6Q6TGC4 694 aa29.23■■■□□ 2.27
COL13A1-210ENST00000517713 CCDC170Q8IYT3 715 aa29.23■■■□□ 2.27
COL13A1-210ENST00000517713 NSUN6Q8TEA1 469 aaKnown RBP29.23■■■□□ 2.27
COL13A1-210ENST00000517713 FIZ1Q96SL8 496 aa29.23■■■□□ 2.27
COL13A1-210ENST00000517713 EDEM3Q9BZQ6 932 aa29.23■■■□□ 2.27
COL13A1-210ENST00000517713 LYPLA2O95372 231 aa29.23■■■□□ 2.27
COL13A1-210ENST00000517713 NR3C1P04150 777 aa29.23■■■□□ 2.27
COL13A1-210ENST00000517713 NCBP1Q09161 790 aaKnown RBP29.23■■■□□ 2.27
COL13A1-210ENST00000517713 PLS1Q14651 629 aa29.23■■■□□ 2.27
COL13A1-210ENST00000517713 ZNF720Q7Z2F6 126 aa29.23■■■□□ 2.27
COL13A1-210ENST00000517713 FAM178BQ8IXR5 827 aa29.23■■■□□ 2.27
COL13A1-210ENST00000517713 PLAGL2Q9UPG8 496 aa29.23■■■□□ 2.27
COL13A1-210ENST00000517713 PPP1R12BO60237 982 aaPredicted RBP29.22■■■□□ 2.27
COL13A1-210ENST00000517713 HIP1RO75146 1068 aa29.22■■■□□ 2.27
COL13A1-210ENST00000517713 ARHGAP25P42331 645 aa29.22■■■□□ 2.27
COL13A1-210ENST00000517713 JAK3P52333 1124 aa29.22■■■□□ 2.27
COL13A1-210ENST00000517713 ODR4Q5SWX8 454 aa29.22■■■□□ 2.27
COL13A1-210ENST00000517713 STXBP4Q6ZWJ1 553 aa29.22■■■□□ 2.27
COL13A1-210ENST00000517713 GPRASP2Q96D09 838 aa29.22■■■□□ 2.27
COL13A1-210ENST00000517713 CYP39A1Q9NYL5 469 aa29.22■■■□□ 2.27
COL13A1-210ENST00000517713 ARMCX3Q9UH62 379 aaPredicted RBP29.22■■■□□ 2.27
COL13A1-210ENST00000517713 CSADQ9Y600 493 aa29.22■■■□□ 2.27
COL13A1-210ENST00000517713 UTRNP46939 3433 aa29.22■■■□□ 2.27
COL13A1-210ENST00000517713 UBE4BO95155 1302 aa29.22■■■□□ 2.27
COL13A1-210ENST00000517713 TGFB1I1O43294 461 aa29.21■■■□□ 2.27
COL13A1-210ENST00000517713 KRT76Q01546 638 aa29.21■■■□□ 2.27
COL13A1-210ENST00000517713 ZC2HC1CQ53FD0 456 aaPredicted RBP29.21■■■□□ 2.27
COL13A1-210ENST00000517713 NLRX1Q86UT6 975 aa29.21■■■□□ 2.27
COL13A1-210ENST00000517713 TCEAL9Q9UHQ7 104 aa29.21■■■□□ 2.27
COL13A1-210ENST00000517713 SFNP31947 248 aa29.21■■■□□ 2.27
COL13A1-210ENST00000517713 KRT83P78385 493 aa29.21■■■□□ 2.27
COL13A1-210ENST00000517713 NAA30Q147X3 362 aaPredicted RBP29.21■■■□□ 2.27
COL13A1-210ENST00000517713 ANKRD7Q92527 254 aa29.21■■■□□ 2.27
COL13A1-210ENST00000517713 MAF1Q9H063 256 aa29.21■■■□□ 2.27
COL13A1-210ENST00000517713 ZMYM2Q9UBW7 1377 aa29.2■■■□□ 2.27
COL13A1-210ENST00000517713 WDR64B1ANS9 1081 aa29.2■■■□□ 2.27
COL13A1-210ENST00000517713 SLC16A3O15427 465 aaKnown RBP29.2■■■□□ 2.27
COL13A1-210ENST00000517713 MAFGO15525 162 aa29.2■■■□□ 2.27
COL13A1-210ENST00000517713 KCNH2Q12809 1159 aa29.2■■■□□ 2.27
COL13A1-210ENST00000517713 MAPK7Q13164 816 aa29.2■■■□□ 2.27
COL13A1-210ENST00000517713 RRAGAQ7L523 313 aa29.2■■■□□ 2.27
COL13A1-210ENST00000517713 BAP1Q92560 729 aa29.2■■■□□ 2.27
COL13A1-210ENST00000517713 SYT17Q9BSW7 474 aa29.2■■■□□ 2.27
COL13A1-210ENST00000517713 A1CFQ9NQ94 594 aaKnown RBP29.2■■■□□ 2.27
COL13A1-210ENST00000517713 CLIC2O15247 247 aa29.2■■■□□ 2.26
COL13A1-210ENST00000517713 AKAP3O75969 853 aa29.2■■■□□ 2.26
COL13A1-210ENST00000517713 CCNE2O96020 404 aa29.2■■■□□ 2.26
COL13A1-210ENST00000517713 ABL1P00519 1130 aa29.2■■■□□ 2.26
COL13A1-210ENST00000517713 RARRES1P49788 294 aa29.2■■■□□ 2.26
COL13A1-210ENST00000517713 PPP2R3AQ06190 1150 aa29.2■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms