RNA–Protein interactions for RNA: ENST00000517533.5

CTNNA1-202, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-202ENST00000517533 ANAPC4Q9UJX5 808 aa7.11□□□□□ -1.27
CTNNA1-202ENST00000517533 CFAP69A5D8W1 941 aa7.1□□□□□ -1.27
CTNNA1-202ENST00000517533 PCDHGA12O60330 932 aa7.1□□□□□ -1.27
CTNNA1-202ENST00000517533 CLASP2O75122 1294 aaKnown RBP7.1□□□□□ -1.27
CTNNA1-202ENST00000517533 H2AFYO75367 372 aaKnown RBP7.1□□□□□ -1.27
CTNNA1-202ENST00000517533 ULK1O75385 1050 aa7.1□□□□□ -1.27
CTNNA1-202ENST00000517533 TCEA3O75764 348 aa7.1□□□□□ -1.27
CTNNA1-202ENST00000517533 C4BPAP04003 597 aaKnown RBP7.1□□□□□ -1.27
CTNNA1-202ENST00000517533 TMEM253P0C7T8 217 aa7.1□□□□□ -1.27
CTNNA1-202ENST00000517533 MYBL2P10244 700 aa7.1□□□□□ -1.27
CTNNA1-202ENST00000517533 HTR3AP46098 478 aa7.1□□□□□ -1.27
CTNNA1-202ENST00000517533 TRAPPC10P48553 1259 aa7.1□□□□□ -1.27
CTNNA1-202ENST00000517533 EPHA5P54756 1037 aa7.1□□□□□ -1.27
CTNNA1-202ENST00000517533 SESN3P58005 492 aa7.1□□□□□ -1.27
CTNNA1-202ENST00000517533 OCRLQ01968 901 aa7.1□□□□□ -1.27
CTNNA1-202ENST00000517533 KLF1Q13351 362 aaPredicted RBP7.1□□□□□ -1.27
CTNNA1-202ENST00000517533 TUSC3Q13454 348 aa7.1□□□□□ -1.27
CTNNA1-202ENST00000517533 PICALMQ13492 652 aa7.1□□□□□ -1.27
CTNNA1-202ENST00000517533 ODF1Q14990 250 aa7.1□□□□□ -1.27
CTNNA1-202ENST00000517533 PTPN21Q16825 1174 aa7.1□□□□□ -1.27
CTNNA1-202ENST00000517533 CATSPEREQ5SY80 951 aa7.1□□□□□ -1.27
CTNNA1-202ENST00000517533 CXorf57Q6NSI4 855 aaKnown RBP7.1□□□□□ -1.27
CTNNA1-202ENST00000517533 C11orf74Q86VG3 221 aa7.1□□□□□ -1.27
CTNNA1-202ENST00000517533 VSIG10LQ86VR7 867 aa7.1□□□□□ -1.27
CTNNA1-202ENST00000517533 SIRT2Q8IXJ6 389 aa7.1□□□□□ -1.27
CTNNA1-202ENST00000517533 FLCNQ8NFG4 579 aa7.1□□□□□ -1.27
CTNNA1-202ENST00000517533 PANK1Q8TE04 598 aa7.1□□□□□ -1.27
CTNNA1-202ENST00000517533 STRBPQ96SI9 672 aaKnown RBP7.1□□□□□ -1.27
CTNNA1-202ENST00000517533 TOMM22Q9NS69 142 aa7.1□□□□□ -1.27
CTNNA1-202ENST00000517533 LUC7L2Q9Y383 392 aaKnown RBP7.1□□□□□ -1.27
CTNNA1-202ENST00000517533 PCDHGA9Q9Y5G4 932 aaKnown RBP7.1□□□□□ -1.27
CTNNA1-202ENST00000517533 PCDHGA8Q9Y5G5 932 aa7.1□□□□□ -1.27
CTNNA1-202ENST00000517533 PCDHGA7Q9Y5G6 932 aa7.1□□□□□ -1.27
CTNNA1-202ENST00000517533 PCDHGA6Q9Y5G7 932 aa7.1□□□□□ -1.27
CTNNA1-202ENST00000517533 PCDHGA3Q9Y5H0 932 aa7.1□□□□□ -1.27
CTNNA1-202ENST00000517533 PCDHGA2Q9Y5H1 932 aa7.1□□□□□ -1.27
CTNNA1-202ENST00000517533 HCFC2Q9Y5Z7 792 aa7.1□□□□□ -1.27
CTNNA1-202ENST00000517533 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.09□□□□□ -1.27
CTNNA1-202ENST00000517533 ACOT7O00154 380 aa7.09□□□□□ -1.27
CTNNA1-202ENST00000517533 RNASE1P07998 156 aaKnown RBP7.09□□□□□ -1.27
CTNNA1-202ENST00000517533 SDHBP21912 280 aa7.09□□□□□ -1.27
CTNNA1-202ENST00000517533 PHC1P78364 1004 aa7.09□□□□□ -1.27
CTNNA1-202ENST00000517533 NR0B2Q15466 257 aa7.09□□□□□ -1.27
CTNNA1-202ENST00000517533 MAPRE1Q15691 268 aaKnown RBP7.09□□□□□ -1.27
CTNNA1-202ENST00000517533 SLC23A3Q6PIS1 610 aa7.09□□□□□ -1.27
CTNNA1-202ENST00000517533 KCTD1Q719H9 257 aa7.09□□□□□ -1.27
CTNNA1-202ENST00000517533 C1orf162Q8NEQ5 155 aaPredicted RBP7.09□□□□□ -1.27
CTNNA1-202ENST00000517533 VPS37AQ8NEZ2 397 aa7.09□□□□□ -1.27
CTNNA1-202ENST00000517533 SYTL4Q96C24 671 aaPredicted RBP7.09□□□□□ -1.27
CTNNA1-202ENST00000517533 ASH2LQ9UBL3 628 aa7.09□□□□□ -1.27
CTNNA1-202ENST00000517533 PUF60Q9UHX1 559 aaKnown RBP7.09□□□□□ -1.27
CTNNA1-202ENST00000517533 ZBTB21Q9ULJ3 1066 aa7.09□□□□□ -1.27
CTNNA1-202ENST00000517533 SPEF1Q9Y4P9 236 aa7.09□□□□□ -1.27
CTNNA1-202ENST00000517533 TCRBV5S2A0A599 114 aa7.08□□□□□ -1.28
CTNNA1-202ENST00000517533 GPR3P46089 330 aa7.08□□□□□ -1.28
CTNNA1-202ENST00000517533 SLC6A11P48066 632 aa7.08□□□□□ -1.28
CTNNA1-202ENST00000517533 SCAND1P57086 179 aa7.08□□□□□ -1.28
CTNNA1-202ENST00000517533 CYP4F8P98187 520 aa7.08□□□□□ -1.28
CTNNA1-202ENST00000517533 CHRNEQ04844 493 aa7.08□□□□□ -1.28
CTNNA1-202ENST00000517533 LRRC32Q14392 662 aa7.08□□□□□ -1.28
CTNNA1-202ENST00000517533 GRM3Q14832 879 aa7.08□□□□□ -1.28
CTNNA1-202ENST00000517533 COBLL1Q53SF7 1204 aa7.08□□□□□ -1.28
CTNNA1-202ENST00000517533 ANO1Q5XXA6 986 aa7.08□□□□□ -1.28
CTNNA1-202ENST00000517533 BICRALQ6AI39 1079 aa7.08□□□□□ -1.28
CTNNA1-202ENST00000517533 RASSF3Q86WH2 238 aa7.08□□□□□ -1.28
CTNNA1-202ENST00000517533 ARRDC4Q8NCT1 418 aa7.08□□□□□ -1.28
CTNNA1-202ENST00000517533 LMBR1Q8WVP7 490 aa7.08□□□□□ -1.28
CTNNA1-202ENST00000517533 RTF1Q92541 710 aaKnown RBP7.08□□□□□ -1.28
CTNNA1-202ENST00000517533 ZNF496Q96IT1 587 aaPredicted RBP7.08□□□□□ -1.28
CTNNA1-202ENST00000517533 PAGR1Q9BTK6 254 aa7.08□□□□□ -1.28
CTNNA1-202ENST00000517533 TNFRSF12AQ9NP84 129 aa7.08□□□□□ -1.28
CTNNA1-202ENST00000517533 PRDM11Q9NQV5 511 aa7.08□□□□□ -1.28
CTNNA1-202ENST00000517533 LUZP4Q9P127 313 aa7.08□□□□□ -1.28
CTNNA1-202ENST00000517533 MYOTQ9UBF9 498 aa7.08□□□□□ -1.28
CTNNA1-202ENST00000517533 PALD1Q9ULE6 856 aa7.08□□□□□ -1.28
CTNNA1-202ENST00000517533 PLA2G2DQ9UNK4 145 aa7.08□□□□□ -1.28
CTNNA1-202ENST00000517533 FAM50BQ9Y247 325 aa7.08□□□□□ -1.28
CTNNA1-202ENST00000517533 PPP2R3BQ9Y5P8 575 aa7.08□□□□□ -1.28
CTNNA1-202ENST00000517533 ATP23Q9Y6H3 246 aa7.08□□□□□ -1.28
CTNNA1-202ENST00000517533 A0A1W2PQ27 194 aa7.07□□□□□ -1.28
CTNNA1-202ENST00000517533 A0A1W2PQ64 194 aa7.07□□□□□ -1.28
CTNNA1-202ENST00000517533 A0A1W2PQC6 194 aa7.07□□□□□ -1.28
CTNNA1-202ENST00000517533 A0A1W2PQD8 194 aa7.07□□□□□ -1.28
CTNNA1-202ENST00000517533 FITM1A5D6W6 292 aa7.07□□□□□ -1.28
CTNNA1-202ENST00000517533 HGSO14964 777 aaPredicted RBP7.07□□□□□ -1.28
CTNNA1-202ENST00000517533 PIP5K1CO60331 668 aa7.07□□□□□ -1.28
CTNNA1-202ENST00000517533 BUB1BO60566 1050 aaPredicted RBP7.07□□□□□ -1.28
CTNNA1-202ENST00000517533 DBHP09172 617 aa7.07□□□□□ -1.28
CTNNA1-202ENST00000517533 PTPN1P18031 435 aaKnown RBP7.07□□□□□ -1.28
CTNNA1-202ENST00000517533 GRIN1Q05586 938 aa7.07□□□□□ -1.28
CTNNA1-202ENST00000517533 GALEQ14376 348 aa7.07□□□□□ -1.28
CTNNA1-202ENST00000517533 TMEM132BQ14DG7 1078 aa7.07□□□□□ -1.28
CTNNA1-202ENST00000517533 EFCAB2Q5VUJ9 269 aa7.07□□□□□ -1.28
CTNNA1-202ENST00000517533 CC2D1AQ6P1N0 951 aaPredicted RBP7.07□□□□□ -1.28
CTNNA1-202ENST00000517533 ANKRD42Q8N9B4 389 aa7.07□□□□□ -1.28
CTNNA1-202ENST00000517533 ZNF610Q8N9Z0 462 aa7.07□□□□□ -1.28
CTNNA1-202ENST00000517533 FAXDC2Q96IV6 333 aa7.07□□□□□ -1.28
CTNNA1-202ENST00000517533 C16orf92Q96LL3 132 aa7.07□□□□□ -1.28
CTNNA1-202ENST00000517533 ELAC2Q9BQ52 826 aaKnown RBP7.07□□□□□ -1.28
CTNNA1-202ENST00000517533 ZDHHC5Q9C0B5 715 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms