RNA–Protein interactions for RNA: ENST00000517215.1

RNU6-1238P-201, Transcript of RNA, U6 small nuclear 1238, pseudogene, humanhuman

BASIC

Gene RNU6-1238P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1238P-201ENST00000517215 GRK4P32298 578 aa-0.17□□□□□ -2.44
RNU6-1238P-201ENST00000517215 KRT9P35527 623 aa-0.17□□□□□ -2.44
RNU6-1238P-201ENST00000517215 HLCSP50747 726 aa-0.17□□□□□ -2.44
RNU6-1238P-201ENST00000517215 RABGGTBP53611 331 aa-0.17□□□□□ -2.44
RNU6-1238P-201ENST00000517215 GAS1P54826 345 aa-0.17□□□□□ -2.44
RNU6-1238P-201ENST00000517215 RPL36AP83881 106 aaKnown RBP-0.17□□□□□ -2.44
RNU6-1238P-201ENST00000517215 RBM10P98175 930 aaKnown RBP-0.17□□□□□ -2.44
RNU6-1238P-201ENST00000517215 GRM1Q13255 1194 aa-0.17□□□□□ -2.44
RNU6-1238P-201ENST00000517215 RBM39Q14498 530 aaKnown RBP-0.17□□□□□ -2.44
RNU6-1238P-201ENST00000517215 INPP5AQ14642 412 aa-0.17□□□□□ -2.44
RNU6-1238P-201ENST00000517215 LRRC41Q15345 812 aa-0.17□□□□□ -2.44
RNU6-1238P-201ENST00000517215 ZNF672Q499Z4 452 aaPredicted RBP-0.17□□□□□ -2.44
RNU6-1238P-201ENST00000517215 KIAA0319Q5VV43 1072 aa-0.17□□□□□ -2.44
RNU6-1238P-201ENST00000517215 ZNF772Q68DY9 489 aaPredicted RBP-0.17□□□□□ -2.44
RNU6-1238P-201ENST00000517215 FCRLBQ6BAA4 426 aa-0.17□□□□□ -2.44
RNU6-1238P-201ENST00000517215 LVRNQ6Q4G3 990 aa-0.17□□□□□ -2.44
RNU6-1238P-201ENST00000517215 IGFL3Q6UXB1 125 aa-0.17□□□□□ -2.44
RNU6-1238P-201ENST00000517215 AEBP1Q8IUX7 1158 aa-0.17□□□□□ -2.44
RNU6-1238P-201ENST00000517215 GALNT12Q8IXK2 581 aa-0.17□□□□□ -2.44
RNU6-1238P-201ENST00000517215 FNBP4Q8N3X1 1017 aaPredicted RBP-0.17□□□□□ -2.44
RNU6-1238P-201ENST00000517215 LZTR1Q8N653 840 aa-0.17□□□□□ -2.44
RNU6-1238P-201ENST00000517215 PLPPR2Q96GM1 343 aa-0.17□□□□□ -2.44
RNU6-1238P-201ENST00000517215 TMEM176AQ96HP8 235 aa-0.17□□□□□ -2.44
RNU6-1238P-201ENST00000517215 SCYL1Q96KG9 808 aa-0.17□□□□□ -2.44
RNU6-1238P-201ENST00000517215 RHOVQ96L33 236 aa-0.17□□□□□ -2.44
RNU6-1238P-201ENST00000517215 SH2D3AQ9BRG2 576 aa-0.17□□□□□ -2.44
RNU6-1238P-201ENST00000517215 SAP130Q9H0E3 1048 aa-0.17□□□□□ -2.44
RNU6-1238P-201ENST00000517215 CDCP1Q9H5V8 836 aa-0.17□□□□□ -2.44
RNU6-1238P-201ENST00000517215 MLXIPLQ9NP71 852 aa-0.17□□□□□ -2.44
RNU6-1238P-201ENST00000517215 ASH2LQ9UBL3 628 aa-0.17□□□□□ -2.44
RNU6-1238P-201ENST00000517215 GPN3Q9UHW5 284 aaPredicted RBP-0.17□□□□□ -2.44
RNU6-1238P-201ENST00000517215 SNCAIPQ9Y6H5 919 aa-0.17□□□□□ -2.44
RNU6-1238P-201ENST00000517215 ADAMTS9Q9P2N4 1935 aa-0.17□□□□□ -2.44
RNU6-1238P-201ENST00000517215 ANKRD17O75179 2603 aaKnown RBP-0.18□□□□□ -2.44
RNU6-1238P-201ENST00000517215 A0A0B4J293 547 aa-0.18□□□□□ -2.44
RNU6-1238P-201ENST00000517215 ACOT8O14734 319 aa-0.18□□□□□ -2.44
RNU6-1238P-201ENST00000517215 ZBTB39O15060 712 aa-0.18□□□□□ -2.44
RNU6-1238P-201ENST00000517215 SLC26A4O43511 780 aa-0.18□□□□□ -2.44
RNU6-1238P-201ENST00000517215 CUTAO60888 179 aa-0.18□□□□□ -2.44
RNU6-1238P-201ENST00000517215 LGR5O75473 907 aa-0.18□□□□□ -2.44
RNU6-1238P-201ENST00000517215 CDKL5O76039 1030 aa-0.18□□□□□ -2.44
RNU6-1238P-201ENST00000517215 PRAMEF1O95521 474 aa-0.18□□□□□ -2.44
RNU6-1238P-201ENST00000517215 LATS1O95835 1130 aa-0.18□□□□□ -2.44
RNU6-1238P-201ENST00000517215 FGF3P11487 239 aaPredicted RBP-0.18□□□□□ -2.44
RNU6-1238P-201ENST00000517215 GYPEP15421 78 aa-0.18□□□□□ -2.44
RNU6-1238P-201ENST00000517215 PDE6AP16499 860 aa-0.18□□□□□ -2.44
RNU6-1238P-201ENST00000517215 CERS1P27544 350 aa-0.18□□□□□ -2.44
RNU6-1238P-201ENST00000517215 L1CAMP32004 1257 aa-0.18□□□□□ -2.44
RNU6-1238P-201ENST00000517215 CDKN2AP42771 156 aaKnown RBP-0.18□□□□□ -2.44
RNU6-1238P-201ENST00000517215 DLK1P80370 383 aa-0.18□□□□□ -2.44
RNU6-1238P-201ENST00000517215 BFSP2Q13515 415 aa-0.18□□□□□ -2.44
RNU6-1238P-201ENST00000517215 IRF5Q13568 498 aa-0.18□□□□□ -2.44
RNU6-1238P-201ENST00000517215 ZNF268Q14587 947 aaPredicted RBP-0.18□□□□□ -2.44
RNU6-1238P-201ENST00000517215 NOLC1Q14978 699 aaKnown RBP eCLIP-0.18□□□□□ -2.44
RNU6-1238P-201ENST00000517215 RABEP1Q15276 862 aa-0.18□□□□□ -2.44
RNU6-1238P-201ENST00000517215 TBR1Q16650 682 aa-0.18□□□□□ -2.44
RNU6-1238P-201ENST00000517215 RTP2Q5QGT7 225 aa-0.18□□□□□ -2.44
RNU6-1238P-201ENST00000517215 PIK3R6Q5UE93 754 aa-0.18□□□□□ -2.44
RNU6-1238P-201ENST00000517215 NAIF1Q69YI7 327 aaPredicted RBP-0.18□□□□□ -2.44
RNU6-1238P-201ENST00000517215 ZNF324BQ6AW86 544 aaPredicted RBP-0.18□□□□□ -2.44
RNU6-1238P-201ENST00000517215 BARGINQ6ZT62 677 aa-0.18□□□□□ -2.44
RNU6-1238P-201ENST00000517215 TMC3Q7Z5M5 1100 aa-0.18□□□□□ -2.44
RNU6-1238P-201ENST00000517215 YTHDF3Q7Z739 585 aaKnown RBP-0.18□□□□□ -2.44
RNU6-1238P-201ENST00000517215 MCATQ8IVS2 390 aaKnown RBP-0.18□□□□□ -2.44
RNU6-1238P-201ENST00000517215 PHACTR4Q8IZ21 702 aa-0.18□□□□□ -2.44
RNU6-1238P-201ENST00000517215 NRACQ8N912 160 aa-0.18□□□□□ -2.44
RNU6-1238P-201ENST00000517215 TTC16Q8NEE8 873 aa-0.18□□□□□ -2.44
RNU6-1238P-201ENST00000517215 SHCBP1Q8NEM2 672 aa-0.18□□□□□ -2.44
RNU6-1238P-201ENST00000517215 MAFAQ8NHW3 353 aaPredicted RBP-0.18□□□□□ -2.44
RNU6-1238P-201ENST00000517215 CPT1CQ8TCG5 803 aa-0.18□□□□□ -2.44
RNU6-1238P-201ENST00000517215 RNF31Q96EP0 1072 aa-0.18□□□□□ -2.44
RNU6-1238P-201ENST00000517215 CYYR1Q96J86 154 aa-0.18□□□□□ -2.44
RNU6-1238P-201ENST00000517215 PDLIM2Q96JY6 352 aa-0.18□□□□□ -2.44
RNU6-1238P-201ENST00000517215 MNTQ99583 582 aa-0.18□□□□□ -2.44
RNU6-1238P-201ENST00000517215 TIMP4Q99727 224 aa-0.18□□□□□ -2.44
RNU6-1238P-201ENST00000517215 EGFL8Q99944 293 aa-0.18□□□□□ -2.44
RNU6-1238P-201ENST00000517215 SLC46A2Q9BY10 475 aa-0.18□□□□□ -2.44
RNU6-1238P-201ENST00000517215 AP5M1Q9H0R1 490 aa-0.18□□□□□ -2.44
RNU6-1238P-201ENST00000517215 CBX8Q9HC52 389 aa-0.18□□□□□ -2.44
RNU6-1238P-201ENST00000517215 ZFYVE28Q9HCC9 887 aa-0.18□□□□□ -2.44
RNU6-1238P-201ENST00000517215 ASB6Q9NWX5 421 aa-0.18□□□□□ -2.44
RNU6-1238P-201ENST00000517215 FOXD3Q9UJU5 478 aaPredicted RBP-0.18□□□□□ -2.44
RNU6-1238P-201ENST00000517215 WBP11Q9Y2W2 641 aaKnown RBP-0.18□□□□□ -2.44
RNU6-1238P-201ENST00000517215 NFS1Q9Y697 457 aa-0.18□□□□□ -2.44
RNU6-1238P-201ENST00000517215 ATRXP46100 2492 aa-0.18□□□□□ -2.44
RNU6-1238P-201ENST00000517215 CROCCQ5TZA2 2017 aa-0.18□□□□□ -2.44
RNU6-1238P-201ENST00000517215 AOX1Q06278 1338 aa-0.18□□□□□ -2.44
RNU6-1238P-201ENST00000517215 AGRNO00468 2067 aa-0.18□□□□□ -2.44
RNU6-1238P-201ENST00000517215 TMEM238LA0A1B0GVL6 79 aa-0.19□□□□□ -2.44
RNU6-1238P-201ENST00000517215 USP17L3A6NCW0 530 aa-0.19□□□□□ -2.44
RNU6-1238P-201ENST00000517215 USP17L4A6NCW7 530 aa-0.19□□□□□ -2.44
RNU6-1238P-201ENST00000517215 ARID3CA6NKF2 412 aa-0.19□□□□□ -2.44
RNU6-1238P-201ENST00000517215 B4E1Z4 1266 aa-0.19□□□□□ -2.44
RNU6-1238P-201ENST00000517215 TULP1O00294 542 aaPredicted RBP-0.19□□□□□ -2.44
RNU6-1238P-201ENST00000517215 FGF10O15520 208 aaPredicted RBP-0.19□□□□□ -2.44
RNU6-1238P-201ENST00000517215 SIGLEC6O43699 453 aa-0.19□□□□□ -2.44
RNU6-1238P-201ENST00000517215 TOMM40O96008 361 aa-0.19□□□□□ -2.44
RNU6-1238P-201ENST00000517215 PDGFAP04085 211 aa-0.19□□□□□ -2.44
RNU6-1238P-201ENST00000517215 POLR3DP05423 398 aaPredicted RBP-0.19□□□□□ -2.44
RNU6-1238P-201ENST00000517215 EGR2P11161 476 aaPredicted RBP-0.19□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms