RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 SNRNP27Q8WVK2 155 aaKnown RBP4.08□□□□□ -1.76
SCARNA13-201ENST00000516672 DHX38Q92620 1227 aaKnown RBP4.08□□□□□ -1.76
SCARNA13-201ENST00000516672 FGF11Q92914 225 aa4.08□□□□□ -1.76
SCARNA13-201ENST00000516672 TMEM176AQ96HP8 235 aa4.08□□□□□ -1.76
SCARNA13-201ENST00000516672 NAF1Q96HR8 494 aaKnown RBP4.08□□□□□ -1.76
SCARNA13-201ENST00000516672 MMP19Q99542 508 aa4.08□□□□□ -1.76
SCARNA13-201ENST00000516672 TMUB1Q9BVT8 246 aa4.08□□□□□ -1.76
SCARNA13-201ENST00000516672 ANKRD2Q9GZV1 360 aa4.08□□□□□ -1.76
SCARNA13-201ENST00000516672 AP5M1Q9H0R1 490 aa4.08□□□□□ -1.76
SCARNA13-201ENST00000516672 KIAA1522Q9P206 1035 aaPredicted RBP4.08□□□□□ -1.76
SCARNA13-201ENST00000516672 EPS15L1Q9UBC2 864 aa4.08□□□□□ -1.76
SCARNA13-201ENST00000516672 MBD1Q9UIS9 605 aaPredicted RBP4.08□□□□□ -1.76
SCARNA13-201ENST00000516672 NDRG2Q9UN36 371 aaKnown RBP4.08□□□□□ -1.76
SCARNA13-201ENST00000516672 AK5Q9Y6K8 562 aa4.08□□□□□ -1.76
SCARNA13-201ENST00000516672 DOCK8Q8NF50 2099 aa4.07□□□□□ -1.76
SCARNA13-201ENST00000516672 TRIP12Q14669 1992 aaPredicted RBP4.07□□□□□ -1.76
SCARNA13-201ENST00000516672 KIAA1671Q9BY89 1806 aa4.07□□□□□ -1.76
SCARNA13-201ENST00000516672 DYNC1LI2O43237 492 aaPredicted RBP4.07□□□□□ -1.76
SCARNA13-201ENST00000516672 GDF11O95390 407 aa4.07□□□□□ -1.76
SCARNA13-201ENST00000516672 CAP2P40123 477 aa4.07□□□□□ -1.76
SCARNA13-201ENST00000516672 MCAMP43121 646 aa4.07□□□□□ -1.76
SCARNA13-201ENST00000516672 KRT83P78385 493 aa4.07□□□□□ -1.76
SCARNA13-201ENST00000516672 UBE3AQ05086 875 aa4.07□□□□□ -1.76
SCARNA13-201ENST00000516672 PLS1Q14651 629 aa4.07□□□□□ -1.76
SCARNA13-201ENST00000516672 PDIA6Q15084 440 aa4.07□□□□□ -1.76
SCARNA13-201ENST00000516672 LETM2Q2VYF4 491 aa4.07□□□□□ -1.76
SCARNA13-201ENST00000516672 PDLIM3Q53GG5 364 aaPredicted RBP4.07□□□□□ -1.76
SCARNA13-201ENST00000516672 C2orf27AQ580R0 203 aa4.07□□□□□ -1.76
SCARNA13-201ENST00000516672 ZNF852Q6ZMS4 543 aa4.07□□□□□ -1.76
SCARNA13-201ENST00000516672 C15orf52Q6ZUT6 534 aaKnown RBP4.07□□□□□ -1.76
SCARNA13-201ENST00000516672 DHX30Q7L2E3 1194 aaKnown RBP eCLIP4.07□□□□□ -1.76
SCARNA13-201ENST00000516672 SLC34A3Q8N130 599 aa4.07□□□□□ -1.76
SCARNA13-201ENST00000516672 MSL3Q8N5Y2 521 aaKnown RBP4.07□□□□□ -1.76
SCARNA13-201ENST00000516672 ZNF689Q96CS4 500 aaPredicted RBP4.07□□□□□ -1.76
SCARNA13-201ENST00000516672 RBMXL1Q96E39 390 aaKnown RBP4.07□□□□□ -1.76
SCARNA13-201ENST00000516672 FAM20AQ96MK3 541 aa4.07□□□□□ -1.76
SCARNA13-201ENST00000516672 ISCA1Q9BUE6 129 aa4.07□□□□□ -1.76
SCARNA13-201ENST00000516672 MRIQ9BWK5 157 aa4.07□□□□□ -1.76
SCARNA13-201ENST00000516672 AMNQ9BXJ7 453 aa4.07□□□□□ -1.76
SCARNA13-201ENST00000516672 DUSP15Q9H1R2 295 aaPredicted RBP4.07□□□□□ -1.76
SCARNA13-201ENST00000516672 ADAMTS8Q9UP79 889 aa4.07□□□□□ -1.76
SCARNA13-201ENST00000516672 MRPS17Q9Y2R5 130 aaKnown RBP4.07□□□□□ -1.76
SCARNA13-201ENST00000516672 NUMBLQ9Y6R0 609 aa4.07□□□□□ -1.76
SCARNA13-201ENST00000516672 ZNFX1Q9P2E3 1918 aaKnown RBP4.07□□□□□ -1.76
SCARNA13-201ENST00000516672 VPS13CQ709C8 3753 aa4.07□□□□□ -1.76
SCARNA13-201ENST00000516672 RYR2Q92736 4967 aa4.06□□□□□ -1.76
SCARNA13-201ENST00000516672 U2SURPO15042 1029 aaKnown RBP4.06□□□□□ -1.76
SCARNA13-201ENST00000516672 SH3BP5O60239 455 aa4.06□□□□□ -1.76
SCARNA13-201ENST00000516672 SEMA7AO75326 666 aa4.06□□□□□ -1.76
SCARNA13-201ENST00000516672 RECQL4O94761 1208 aa4.06□□□□□ -1.76
SCARNA13-201ENST00000516672 RHOBTB1O94844 696 aa4.06□□□□□ -1.76
SCARNA13-201ENST00000516672 PAPSS2O95340 614 aaPredicted RBP4.06□□□□□ -1.76
SCARNA13-201ENST00000516672 CD59P13987 128 aa4.06□□□□□ -1.76
SCARNA13-201ENST00000516672 ENGP17813 658 aa4.06□□□□□ -1.76
SCARNA13-201ENST00000516672 PHKA1P46020 1223 aa4.06□□□□□ -1.76
SCARNA13-201ENST00000516672 PXNP49023 591 aaPredicted RBP4.06□□□□□ -1.76
SCARNA13-201ENST00000516672 RGS3P49796 1198 aa4.06□□□□□ -1.76
SCARNA13-201ENST00000516672 TMEM62Q0P6H9 643 aa4.06□□□□□ -1.76
SCARNA13-201ENST00000516672 HTR4Q13639 388 aa4.06□□□□□ -1.76
SCARNA13-201ENST00000516672 GAS6Q14393 721 aa4.06□□□□□ -1.76
SCARNA13-201ENST00000516672 ELF2Q15723 593 aa4.06□□□□□ -1.76
SCARNA13-201ENST00000516672 LINC00303Q3SY05 128 aa4.06□□□□□ -1.76
SCARNA13-201ENST00000516672 PLEKHG4Q58EX7 1191 aa4.06□□□□□ -1.76
SCARNA13-201ENST00000516672 DIEXFQ68CQ4 756 aaKnown RBP4.06□□□□□ -1.76
SCARNA13-201ENST00000516672 NFRKBQ6P4R8 1299 aa4.06□□□□□ -1.76
SCARNA13-201ENST00000516672 TRAF7Q6Q0C0 670 aa4.06□□□□□ -1.76
SCARNA13-201ENST00000516672 USP17L2Q6R6M4 530 aa4.06□□□□□ -1.76
SCARNA13-201ENST00000516672 MAMDC4Q6UXC1 1216 aa4.06□□□□□ -1.76
SCARNA13-201ENST00000516672 GPR149Q86SP6 731 aa4.06□□□□□ -1.76
SCARNA13-201ENST00000516672 PTRH1Q86Y79 214 aaKnown RBP4.06□□□□□ -1.76
SCARNA13-201ENST00000516672 CTAGE1Q96RT6 745 aa4.06□□□□□ -1.76
SCARNA13-201ENST00000516672 LPIN3Q9BQK8 851 aa4.06□□□□□ -1.76
SCARNA13-201ENST00000516672 RPP25Q9BUL9 199 aaKnown RBP4.06□□□□□ -1.76
SCARNA13-201ENST00000516672 CARD11Q9BXL7 1154 aa4.06□□□□□ -1.76
SCARNA13-201ENST00000516672 ABHD16BQ9H3Z7 469 aa4.06□□□□□ -1.76
SCARNA13-201ENST00000516672 LMAN1LQ9HAT1 526 aa4.06□□□□□ -1.76
SCARNA13-201ENST00000516672 DZANK1Q9NVP4 752 aa4.06□□□□□ -1.76
SCARNA13-201ENST00000516672 CDKN2AIPQ9NXV6 580 aaPredicted RBP4.06□□□□□ -1.76
SCARNA13-201ENST00000516672 GNEQ9Y223 722 aaKnown RBP4.06□□□□□ -1.76
SCARNA13-201ENST00000516672 RNF212BA8MTL3 300 aa4.05□□□□□ -1.76
SCARNA13-201ENST00000516672 ANHXE9PGG2 379 aa4.05□□□□□ -1.76
SCARNA13-201ENST00000516672 PDE8AO60658 829 aa4.05□□□□□ -1.76
SCARNA13-201ENST00000516672 AKAP3O75969 853 aa4.05□□□□□ -1.76
SCARNA13-201ENST00000516672 CENPBP07199 599 aaPredicted RBP4.05□□□□□ -1.76
SCARNA13-201ENST00000516672 MYL3P08590 195 aa4.05□□□□□ -1.76
SCARNA13-201ENST00000516672 PURAQ00577 322 aaKnown RBP4.05□□□□□ -1.76
SCARNA13-201ENST00000516672 PTPN11Q06124 597 aaPredicted RBP4.05□□□□□ -1.76
SCARNA13-201ENST00000516672 RBL2Q08999 1139 aa4.05□□□□□ -1.76
SCARNA13-201ENST00000516672 AIMP1Q12904 312 aaKnown RBP4.05□□□□□ -1.76
SCARNA13-201ENST00000516672 ZYXQ15942 572 aaKnown RBP4.05□□□□□ -1.76
SCARNA13-201ENST00000516672 ZNF618Q5T7W0 954 aa4.05□□□□□ -1.76
SCARNA13-201ENST00000516672 ATCAYQ86WG3 371 aa4.05□□□□□ -1.76
SCARNA13-201ENST00000516672 SPEM1Q8N4L4 309 aa4.05□□□□□ -1.76
SCARNA13-201ENST00000516672 FAM133AQ8N9E0 248 aa4.05□□□□□ -1.76
SCARNA13-201ENST00000516672 TCF25Q9BQ70 676 aa4.05□□□□□ -1.76
SCARNA13-201ENST00000516672 LZTS2Q9BRK4 669 aa4.05□□□□□ -1.76
SCARNA13-201ENST00000516672 ARHGAP9Q9BRR9 750 aa4.05□□□□□ -1.76
SCARNA13-201ENST00000516672 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.05□□□□□ -1.76
SCARNA13-201ENST00000516672 KDM4CQ9H3R0 1056 aa4.05□□□□□ -1.76
SCARNA13-201ENST00000516672 ENTPD7Q9NQZ7 604 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms